version 1.0
Alteromonas macleodii 'Deep ecotype', complete genome - 1..4412282 4072 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2357 40.67 -1 2568041..2568190 - 49 196157182 - MADE_02381 - hypothetical protein 2358 47.24 0 2568516..2570888 - 790 196157183 - MADE_02382 - phosphoenolpyruvate synthase 2359 42.31 0 2571161..2571973 + 270 196157184 - MADE_02383 - hypothetical protein 2360 48.83 +1 2572048..2572260 - 70 196157185 - MADE_02384 - hypothetical protein 2361 45.79 0 2572530..2574488 - 652 196157186 - MADE_02385 - TPR domain protein 2362 46.49 0 2574653..2577313 - 886 196157187 - MADE_02386 - TonB-dependent receptor 2363 46.16 0 2577380..2578876 - 498 196157188 - MADE_02387 - hypothetical protein 2364 47.08 0 2578951..2579670 - 239 196157189 - MADE_02388 - DNA polymerase III, epsilon subunit 2365 48.20 0 2579768..2580238 + 156 196157190 - MADE_02389 - ribonuclease HI 2366 48.47 +1 2580314..2581291 - 325 196157191 - MADE_02390 - oxidoreductase, zinc-binding dehydrogenase family protein 2367 46.65 0 2581443..2582636 + 397 196157192 - MADE_02391 - putative methyltransferase with S-adenosyl-L-methionine-dependent methyltransferase activity and a PUA domain 2368 44.84 0 2582735..2582986 - 83 196157193 - MADE_02392 - membrane protein-like protein 2369 45.27 0 2583257..2583457 - 66 196157194 - MADE_02393 - membrane protein-like protein 2370 47.23 0 2583781..2587737 - 1318 196157195 - MADE_02394 - helicase, ATP-dependent 2371 47.80 0 2587910..2589181 - 423 196157196 - MADE_02395 - NA+/H+ antiporter NHAC 2372 44.49 0 2589531..2590883 - 450 196157197 - MADE_02396 - transcriptional regulator, AraC family protein 2373 44.85 0 2590932..2591843 - 303 196157198 - MADE_02397 - GGDEF domain protein 2374 45.82 0 2592285..2594990 + 901 196157199 - MADE_02398 - putative tonB-dependent receptor 2375 47.50 0 2595014..2595133 - 39 196157200 - MADE_02399 - hypothetical protein 2376 48.23 0 2595132..2596178 + 348 196157201 - MADE_02400 - putative acid phosphatase 2377 43.84 0 2596193..2598409 + 738 196157202 - MADE_02401 - putative phytase domain protein 2378 47.20 0 2598487..2598933 - 148 196157203 - MADE_02402 - CBS domain protein 2379 49.14 +1 2599071..2600114 - 347 196157204 - MADE_02403 - Asparaginase family protein 2380 44.54 0 2600234..2603944 - 1236 196157205 - MADE_02404 - putative sensor protein 2381 46.07 0 2604172..2605608 + 478 196157206 - MADE_02405 - exodeoxyribonuclease I 2382 47.16 0 2605735..2607390 + 551 196157207 - MADE_02406 - hypothetical protein 2383 43.58 0 2607589..2609100 - 503 196157208 - MADE_02407 - GGDEF domain protein 2384 47.17 0 2609125..2610360 - 411 196157209 - MADE_02408 - Kynureninase 2385 46.14 0 2610353..2611492 - 379 196157210 - MADE_02409 - putative lipase/esterase 2386 47.16 0 2611586..2612836 - 416 196157211 - MADE_02410 - acetyl-CoA acetyltransferase with thiolase domain 2387 42.76 0 2613059..2613514 + 151 196157212 - MADE_02411 - Transcriptional regulator, MerR family protein 2388 46.92 0 2613511..2614680 + 389 196157213 - MADE_02412 - isovaleryl-CoA dehydrogenase 2389 48.07 0 2614888..2616495 + 535 196157214 - MADE_02413 - methylcrotonyl CoA carboxylase, beta subunit 2390 45.32 0 2616507..2617307 + 266 196157215 - MADE_02414 - Enoyl-CoA hydratase/isomerase 2391 45.63 0 2617297..2619297 + 666 196157216 - MADE_02415 - methylcrotonyl-CoA carboxylase, alpha subunit 2392 44.59 0 2619302..2620198 + 298 196157217 - MADE_02416 - hydroxymethylglutaryl-CoA lyase 2393 36.88 -2 2620361..2620501 - 46 196157218 - MADE_02417 - hypothetical protein 2394 40.63 -1 2620585..2621571 + 328 196157219 - MADE_02418 - hypothetical protein 2395 43.90 0 2621579..2622733 - 384 196157220 - MADE_02419 - permease of the major facilitator superfamily 2396 40.64 -1 2622810..2623343 - 177 196157221 - MADE_02420 - hypothetical protein 2397 46.60 0 2623937..2625232 + 431 196157222 - MADE_02421 - glucose-1-phosphate adenylyltransferase 2398 46.02 0 2625269..2626072 - 267 196157223 - MADE_02422 - acyltransferase 3 2399 47.32 0 2626145..2627467 - 440 196157224 - MADE_02423 - major facilitator family transporter 2400 46.08 0 2627638..2628453 + 271 196157225 - MADE_02424 - putative acyl-CoA thioesterase, TesB family protein 2401 45.51 0 2628490..2629335 - 281 196157226 - MADE_02425 - putative signal transduction protein 2402 46.31 0 2629834..2631105 + 423 196157227 - MADE_02426 - putative glycosyltransferase 2403 46.31 0 2631142..2631534 - 130 196157228 - MADE_02427 - putative selenocysteine lyase 2404 44.19 0 2631549..2631944 - 131 196157229 - MADE_02428 - hypothetical protein 2405 41.73 0 2632115..2632900 + 261 196157230 - MADE_02429 - hypothetical protein 2406 45.19 0 2633062..2633871 + 269 196157231 - MADE_02430 - exodeoxyribonuclease III 2407 43.63 0 2633939..2634550 + 203 196157232 - MADE_02431 - hypothetical protein 2408 47.87 0 2634640..2635815 + 391 196157233 - MADE_02432 - hypothetical protein 2409 43.27 0 2635812..2637260 + 482 196157234 - MADE_02433 - sensor histide kinase 2410 41.92 0 2637272..2637772 - 166 196157235 - MADE_02434 - putative hypoxanthine phosphoribosyltransferase 2411 45.76 0 2637913..2639328 - 471 196157236 - MADE_02435 - lipoprotein releasing system transmembrane protein LolE 2412 45.17 0 2639503..2640102 + 199 196157237 - MADE_02436 - hypothetical protein 2413 48.68 +1 2640165..2643662 + 1165 196157238 - MADE_02437 - transcription-repair coupling factor 2414 48.82 +1 2643664..2645193 + 509 196157239 - MADE_02438 - hypothetical protein 2415 47.48 0 2645341..2645856 + 171 196157240 - MADE_02439 - putative vitamin B12 related Cobalamin adenosyltransferase 2416 48.78 +1 2645863..2646885 - 340 196157241 - MADE_02440 - beta-hexosaminidase 2417 49.76 +1 2646993..2649323 + 776 196157242 - MADE_02441 - putative hydrolase 2418 46.50 0 2649320..2649790 + 156 196157243 - MADE_02442 - ybaK/ebsC protein 2419 45.60 0 2649954..2650499 - 181 196157244 - MADE_02443 - hypothetical protein 2420 46.00 0 2650616..2650915 - 99 196157245 - MADE_02444 - integration host factor alpha subunit 2421 47.24 0 2650919..2653306 - 795 196157246 - MADE_02445 - phenylalanyl-tRNA synthetase beta subunit 2422 45.97 0 2653321..2654301 - 326 196157247 - MADE_02446 - phenylalanyl-tRNA synthetase alpha subunit 2423 38.49 -1 2654628..2655461 + 277 196157248 - MADE_02447 - phenylalanyl-tRNA synthetase alpha subunit 2424 37.87 -2 2655812..2656957 - 381 196157249 - MADE_02448 - glycosyl transferase, group 1 2425 40.32 -1 2657126..2658256 + 376 196157250 - MADE_02449 - Glycosyl transferase group 1 2426 40.05 -1 2658728..2659546 + 272 196157251 - MADE_02450 - hypothetical protein 2427 42.86 0 2660035..2660223 - 62 196157252 - MADE_02451 - phenylalanyl-tRNA synthetase alpha subunit 2428 36.88 -2 2660422..2662341 + 639 196157253 - MADE_02452 - putative lipopolysaccharide modification acyltransferase 2429 47.40 0 2662945..2663925 + 326 196157254 - MADE_02453 - IS5 transposase 2430 35.28 -2 2664078..2664692 + 204 196157255 - MADE_02454 - acyltransferase 3 2431 38.42 -1 2665147..2665893 + 248 196157256 - MADE_02455 - glycosyltransferase 2432 48.39 +1 2665964..2667457 + 497 196157257 - MADE_02456 - putative orphan protein; putative transposase 2433 46.89 0 2667477..2668199 + 240 196157258 - MADE_02457 - putative transposase 2434 42.44 0 2668479..2669576 - 365 196157259 - MADE_02458 - Glycosyl transferase, group 1 2435 37.78 -2 2669854..2669988 - 44 196157260 - MADE_02459 - hypothetical protein 2436 40.62 -1 2669990..2672377 + 795 196157261 - MADE_02460 - hypothetical protein 2437 39.89 -1 2672588..2673289 + 233 196157262 - MADE_02461 - hypothetical protein 2438 35.61 -2 2673456..2674202 + 248 196157263 - MADE_02462 - hypothetical protein 2439 38.02 -2 2674409..2675668 + 419 196157264 - MADE_02463 - putative glycosyl transferase in colanic acid gene cluster 2440 35.58 -2 2675821..2677287 - 488 196157265 - MADE_02464 - probable polysaccharide transport protein 2441 40.32 -1 2677356..2678285 - 309 196157266 - MADE_02465 - dolichyl-phosphate mannose synthase related protein 2442 37.40 -2 2678648..2679508 - 286 196157267 - MADE_02466 - glycosyl transferase 2443 39.98 -1 2679553..2680650 - 365 196157268 - MADE_02467 - glycosyltransferase 2444 37.49 -2 2680655..2681977 - 440 196157269 - MADE_02468 - hypothetical protein 2445 40.61 -1 2681980..2683119 - 379 196157270 - MADE_02469 - putative glycosyltransferase 2446 42.11 0 2683417..2684145 + 242 196157271 - MADE_02470 - periplasmic protein 2447 41.49 -1 2684145..2686082 + 645 196157272 - MADE_02471 - diguanylate cyclase/phosphodiesterase 2448 47.07 0 2686239..2686784 + 181 196157273 - MADE_02472 - hypothetical protein 2449 43.17 0 2686826..2688238 + 470 196157274 - MADE_02473 - O-antigen polymerase 2450 43.24 0 2688272..2688685 + 137 196157275 - MADE_02474 - hypothetical protein 2451 38.89 -1 2688682..2689437 - 251 196157276 - MADE_02475 - hypothetical protein 2452 43.65 0 2689430..2690098 - 222 196157277 - MADE_02476 - capsular polysaccharide biosynthesis protein, putative 2453 42.58 0 2690180..2692396 - 738 196157278 - MADE_02477 - putative Exopolysaccharide biosynthesis protein 2454 46.54 0 2692423..2692884 - 153 196157279 - MADE_02478 - Periplasmic protein involved in polysaccharide export 2455 43.79 0 2692968..2694143 - 391 196157280 - MADE_02479 - hypothetical protein 2456 41.51 0 2694853..2696307 + 484 196157281 - MADE_02480 - Sugar transferase involved in lipopolysaccharide synthesis 44.90 MEAN 3.40 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0