version 1.0
Alteromonas macleodii 'Deep ecotype', complete genome - 1..4412282 4072 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2309 48.79 +1 2520172..2521374 - 400 196157134 - MADE_02333 - 3-oxoacyl-(acyl-carrier-protein) synthase II 2310 46.00 0 2521352..2522164 - 270 196157135 - MADE_02334 - fatty acid/phospholipid synthesis protein 2311 50.88 +1 2522210..2522380 - 56 196157136 - MADE_02335 - 50S ribosomal protein L32 2312 45.70 0 2522384..2523046 - 220 196157137 - MADE_02336 - hypothetical protein 2313 46.63 0 2523114..2523692 + 192 196157138 - MADE_02337 - maf protein, putative 2314 44.82 0 2523711..2524415 - 234 196157139 - MADE_02338 - putative phosphoglycolate phosphatase, contains a phosphatase-like domain 2315 47.88 0 2524423..2525364 - 313 196157140 - MADE_02339 - ribosomal large subunit pseudouridine synthase C (pseudouridylate synthase) (uracil hydrolyase 2316 37.12 -2 2525419..2525550 + 43 196157141 - MADE_02340 - hypothetical protein 2317 39.17 -1 2525592..2525711 + 39 196157142 - MADE_02341 - hypothetical protein 2318 49.38 +1 2526167..2529562 + 1131 196157143 - MADE_02342 - RNase E 2319 48.68 +1 2529695..2530789 + 364 196157144 - MADE_02343 - hypothetical protein 2320 47.04 0 2530989..2531360 + 123 196157145 - MADE_02344 - Cryptic haloacid dehalogenase 1 2321 47.15 0 2531412..2531867 - 151 196157146 - MADE_02345 - elaA protein 2322 34.75 -2 2531869..2532009 - 46 196157147 - MADE_02346 - hypothetical protein 2323 49.44 +1 2532252..2534591 + 779 196157148 - MADE_02347 - putative formate dehydrogenase oxidoreductase protein 2324 39.47 -1 2534649..2534762 + 37 196157149 - MADE_02348 - hypothetical protein 2325 44.97 0 2535320..2535955 - 211 196157150 - MADE_02349 - molybdopterin guanine dinucleotide synthase 2326 44.94 0 2536047..2536856 - 269 196157151 - MADE_02350 - putative zinc metalloendopeptidase 2327 46.56 0 2537221..2537772 - 183 196157152 - MADE_02351 - nucleoprotein/polynucleotide-associated enzyme 2328 47.16 0 2537909..2540569 - 886 196157153 - MADE_02352 - DNA topoisomerase I 2329 41.53 0 2540713..2540895 - 60 196157154 - MADE_02353 - hypothetical protein 2330 48.17 0 2540967..2542307 + 446 196157155 - MADE_02354 - Succinylarginine dihydrolase 2331 45.90 0 2542363..2544900 - 845 196157156 - MADE_02355 - invasin domain protein 2332 44.47 0 2545015..2546361 + 448 196157157 - MADE_02356 - putative proton/glutamate symporter 2333 44.34 0 2546537..2547763 - 408 196157158 - MADE_02357 - ABC transporter integral membrane subunit 2334 47.87 0 2547750..2548478 - 242 196157159 - MADE_02358 - ABC transporter ATP-binding subunit 2335 41.10 -1 2548587..2548805 + 72 196157160 - MADE_02359 - translation initiation factor IF-1 2336 45.38 0 2548986..2550056 - 356 196157161 - MADE_02360 - ATP-dependent specificity subunit of clpA-clpP serine protease 2337 46.24 0 2550091..2550555 - 154 196157162 - MADE_02361 - ATP-dependent Clp protease, ATP-binding subunit ClpA 2338 47.52 0 2550558..2551262 - 234 196157163 - MADE_02362 - ATP-dependent Clp protease, ATP-binding subunit ClpA 2339 43.30 0 2551287..2551607 - 106 196157164 - MADE_02363 - ATP-dependent Clp protease adaptor protein ClpS 2340 47.03 0 2551849..2552067 + 72 196157165 - MADE_02364 - stress response protein CspD 2341 39.84 -1 2552023..2552145 - 40 196157166 - MADE_02365 - hypothetical protein 2342 45.77 0 2552604..2554823 - 739 196157167 - MADE_02366 - isocitrate dehydrogenase, NADP-dependent 2343 45.86 0 2555335..2555877 + 180 196157168 - MADE_02367 - ribosomal large subunit pseudouridine synthase E 2344 46.22 0 2556281..2557390 + 369 196157169 - MADE_02368 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 2345 47.85 0 2557390..2558016 + 208 196157170 - MADE_02369 - hypothetical protein 2346 45.69 0 2558030..2559397 + 455 196157171 - MADE_02370 - adenylosuccinate lyase 2347 41.33 -1 2559388..2559537 - 49 196157172 - MADE_02371 - hypothetical protein 2348 44.65 0 2559539..2560192 + 217 196157173 - MADE_02372 - adenylate/guanylate cyclase 2349 47.64 0 2560365..2561531 + 388 196157174 - MADE_02373 - putative enzyme with RmlC-like domain 2350 46.41 0 2561541..2561999 + 152 196157175 - MADE_02374 - putative Glr3403 protein 2351 44.36 0 2562016..2562432 - 138 196157176 - MADE_02375 - hypothetical protein 2352 40.43 -1 2562453..2562593 - 46 196157177 - MADE_02376 - hypothetical protein 2353 46.76 0 2562751..2562966 + 71 196157178 - MADE_02377 - integral membrane protein TerC 2354 48.13 0 2563331..2563837 + 168 196157179 - MADE_02378 - Ferredoxin/oxidoreductase 2355 49.16 +1 2563834..2566095 + 753 196157180 - MADE_02379 - Twin-arginine translocation pathway signal 2356 43.35 0 2566458..2567495 - 345 196157181 - MADE_02380 - ISCps1, transposase 2357 40.67 -1 2568041..2568190 - 49 196157182 - MADE_02381 - hypothetical protein 2358 47.24 0 2568516..2570888 - 790 196157183 - MADE_02382 - phosphoenolpyruvate synthase 2359 42.31 0 2571161..2571973 + 270 196157184 - MADE_02383 - hypothetical protein 2360 48.83 +1 2572048..2572260 - 70 196157185 - MADE_02384 - hypothetical protein 2361 45.79 0 2572530..2574488 - 652 196157186 - MADE_02385 - TPR domain protein 2362 46.49 0 2574653..2577313 - 886 196157187 - MADE_02386 - TonB-dependent receptor 2363 46.16 0 2577380..2578876 - 498 196157188 - MADE_02387 - hypothetical protein 2364 47.08 0 2578951..2579670 - 239 196157189 - MADE_02388 - DNA polymerase III, epsilon subunit 2365 48.20 0 2579768..2580238 + 156 196157190 - MADE_02389 - ribonuclease HI 2366 48.47 +1 2580314..2581291 - 325 196157191 - MADE_02390 - oxidoreductase, zinc-binding dehydrogenase family protein 2367 46.65 0 2581443..2582636 + 397 196157192 - MADE_02391 - putative methyltransferase with S-adenosyl-L-methionine-dependent methyltransferase activity and a PUA domain 2368 44.84 0 2582735..2582986 - 83 196157193 - MADE_02392 - membrane protein-like protein 2369 45.27 0 2583257..2583457 - 66 196157194 - MADE_02393 - membrane protein-like protein 2370 47.23 0 2583781..2587737 - 1318 196157195 - MADE_02394 - helicase, ATP-dependent 2371 47.80 0 2587910..2589181 - 423 196157196 - MADE_02395 - NA+/H+ antiporter NHAC 2372 44.49 0 2589531..2590883 - 450 196157197 - MADE_02396 - transcriptional regulator, AraC family protein 2373 44.85 0 2590932..2591843 - 303 196157198 - MADE_02397 - GGDEF domain protein 2374 45.82 0 2592285..2594990 + 901 196157199 - MADE_02398 - putative tonB-dependent receptor 2375 47.50 0 2595014..2595133 - 39 196157200 - MADE_02399 - hypothetical protein 2376 48.23 0 2595132..2596178 + 348 196157201 - MADE_02400 - putative acid phosphatase 2377 43.84 0 2596193..2598409 + 738 196157202 - MADE_02401 - putative phytase domain protein 2378 47.20 0 2598487..2598933 - 148 196157203 - MADE_02402 - CBS domain protein 2379 49.14 +1 2599071..2600114 - 347 196157204 - MADE_02403 - Asparaginase family protein 2380 44.54 0 2600234..2603944 - 1236 196157205 - MADE_02404 - putative sensor protein 2381 46.07 0 2604172..2605608 + 478 196157206 - MADE_02405 - exodeoxyribonuclease I 2382 47.16 0 2605735..2607390 + 551 196157207 - MADE_02406 - hypothetical protein 2383 43.58 0 2607589..2609100 - 503 196157208 - MADE_02407 - GGDEF domain protein 2384 47.17 0 2609125..2610360 - 411 196157209 - MADE_02408 - Kynureninase 2385 46.14 0 2610353..2611492 - 379 196157210 - MADE_02409 - putative lipase/esterase 2386 47.16 0 2611586..2612836 - 416 196157211 - MADE_02410 - acetyl-CoA acetyltransferase with thiolase domain 2387 42.76 0 2613059..2613514 + 151 196157212 - MADE_02411 - Transcriptional regulator, MerR family protein 2388 46.92 0 2613511..2614680 + 389 196157213 - MADE_02412 - isovaleryl-CoA dehydrogenase 2389 48.07 0 2614888..2616495 + 535 196157214 - MADE_02413 - methylcrotonyl CoA carboxylase, beta subunit 2390 45.32 0 2616507..2617307 + 266 196157215 - MADE_02414 - Enoyl-CoA hydratase/isomerase 2391 45.63 0 2617297..2619297 + 666 196157216 - MADE_02415 - methylcrotonyl-CoA carboxylase, alpha subunit 2392 44.59 0 2619302..2620198 + 298 196157217 - MADE_02416 - hydroxymethylglutaryl-CoA lyase 2393 36.88 -2 2620361..2620501 - 46 196157218 - MADE_02417 - hypothetical protein 2394 40.63 -1 2620585..2621571 + 328 196157219 - MADE_02418 - hypothetical protein 2395 43.90 0 2621579..2622733 - 384 196157220 - MADE_02419 - permease of the major facilitator superfamily 2396 40.64 -1 2622810..2623343 - 177 196157221 - MADE_02420 - hypothetical protein 2397 46.60 0 2623937..2625232 + 431 196157222 - MADE_02421 - glucose-1-phosphate adenylyltransferase 2398 46.02 0 2625269..2626072 - 267 196157223 - MADE_02422 - acyltransferase 3 2399 47.32 0 2626145..2627467 - 440 196157224 - MADE_02423 - major facilitator family transporter 2400 46.08 0 2627638..2628453 + 271 196157225 - MADE_02424 - putative acyl-CoA thioesterase, TesB family protein 2401 45.51 0 2628490..2629335 - 281 196157226 - MADE_02425 - putative signal transduction protein 2402 46.31 0 2629834..2631105 + 423 196157227 - MADE_02426 - putative glycosyltransferase 2403 46.31 0 2631142..2631534 - 130 196157228 - MADE_02427 - putative selenocysteine lyase 2404 44.19 0 2631549..2631944 - 131 196157229 - MADE_02428 - hypothetical protein 2405 41.73 0 2632115..2632900 + 261 196157230 - MADE_02429 - hypothetical protein 2406 45.19 0 2633062..2633871 + 269 196157231 - MADE_02430 - exodeoxyribonuclease III 2407 43.63 0 2633939..2634550 + 203 196157232 - MADE_02431 - hypothetical protein 2408 47.87 0 2634640..2635815 + 391 196157233 - MADE_02432 - hypothetical protein 44.90 MEAN 3.40 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0