version 1.0
Alteromonas macleodii 'Deep ecotype', complete genome - 1..4412282 4072 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2258 44.78 0 2466937..2467740 - 267 196157083 - MADE_02282 - 2,5-diketo-D-gluconate reductase B 2259 49.50 +1 2467972..2468868 - 298 196157084 - MADE_02283 - pseudouridine synthase (makes pseudouridine2605 in 23 S RNA) 2260 45.45 0 2468909..2469502 - 197 196157085 - MADE_02284 - hypothetical protein 2261 43.87 0 2469489..2470352 - 287 196157086 - MADE_02285 - chromosome segregation and condensation protein ScpA 2262 46.70 0 2470462..2471082 - 206 196157087 - MADE_02286 - Sua5/YciO/YrdC/YwlC family protein 2263 47.32 0 2471234..2472127 - 297 196157088 - MADE_02287 - PHP domain protein 2264 48.37 +1 2472407..2474095 + 562 196157089 - MADE_02288 - anthranilate synthase component I 2265 47.71 0 2474092..2474724 + 210 196157090 - MADE_02289 - glutamine amido-transferase 2266 50.39 +1 2474717..2475748 + 343 196157091 - MADE_02290 - anthranilate phosphoribosyltransferase 2267 46.95 0 2475741..2477150 + 469 196157092 - MADE_02291 - bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase 2268 48.14 0 2477172..2478353 + 393 196157093 - MADE_02292 - tryptophan synthase, beta protein 2269 49.75 +1 2478371..2479162 + 263 196157094 - MADE_02293 - tryptophan synthase subunit alpha 2270 53.26 +2 2479177..2479467 + 96 196157095 - MADE_02294 - hypothetical protein 2271 44.67 0 2479744..2480184 - 146 196157096 - MADE_02295 - general stress protein 2272 45.99 0 2481086..2481322 + 78 196157097 - MADE_02296 - Propeptide, PepSY amd peptidase M4 2273 43.26 0 2481324..2481998 + 224 196157098 - MADE_02297 - response regulator in two-component regulatory system with PhoQ 2274 42.79 0 2481995..2483326 + 443 196157099 - MADE_02298 - sensor histidine kinase 2275 42.58 0 2483677..2484714 - 345 196157100 - MADE_02299 - hypothetical protein 2276 36.04 -2 2484794..2485162 + 122 196157101 - MADE_02300 - D-erythro-7,8-dihydroneopterin triphosphate epimerase 2277 46.55 0 2485198..2486082 + 294 196157102 - MADE_02301 - putative sugar nucleotide epimerase 2278 45.94 0 2486413..2488935 - 840 196157103 - MADE_02302 - ABC-type transport system, permease component 2279 45.06 0 2488936..2489634 - 232 196157104 - MADE_02303 - putative Lipoprotein releasing system ATP-binding component of ABC transporter 2280 39.27 -1 2489651..2490307 + 218 196157105 - MADE_02304 - lipase/acylhydrolase, GDSL family protein 2281 51.37 +1 2490354..2490536 + 60 196157106 - MADE_02305 - hypothetical protein 2282 41.44 -1 2490779..2491753 + 324 196157107 - MADE_02306 - hypothetical protein 2283 44.73 0 2491771..2492709 - 312 196157108 - MADE_02307 - NifR3/Smm1 family protein 2284 39.19 -1 2493170..2493391 - 73 196157109 - MADE_02308 - hypothetical protein 2285 45.65 0 2493451..2494359 - 302 196157110 - MADE_02309 - Zn-dependent enzyme from deacylase/carboxypeptidase superfamily protein 2286 42.62 0 2495609..2496448 - 279 196157111 - MADE_02310 - glutamyl-tRNA synthetase 2287 46.17 0 2496439..2496960 - 173 196157112 - MADE_02311 - hypothetical protein 2288 43.70 0 2497437..2498111 + 224 196157113 - MADE_02312 - putative unknown enzyme 2289 48.59 +1 2498104..2499060 + 318 196157114 - MADE_02313 - putative transcriptional regulator 2290 42.36 0 2499376..2499774 + 132 196157115 - MADE_02314 - hypothetical protein 2291 43.36 0 2500018..2500416 + 132 196157116 - MADE_02315 - hypothetical protein 2292 47.28 0 2500783..2502582 - 599 196157117 - MADE_02316 - Acyl-CoA dehydrogenase 2293 49.24 +1 2502592..2503773 - 393 196157118 - MADE_02317 - acetyl-CoA acetyltransferase 2294 48.15 0 2503904..2506036 - 710 196157119 - MADE_02318 - probable trifunctional enoyl-CoA hydratase/delta3-cis-delta2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase oxidoreductase protein 2295 46.58 0 2506276..2507196 + 306 196157120 - MADE_02319 - haloalkane dehalogenase 2296 49.41 +1 2507209..2507973 + 254 196157121 - MADE_02320 - Short-chain dehydrogenase/reductase SDR 2297 36.67 -2 2507960..2508079 - 39 196157122 - MADE_02321 - hypothetical protein 2298 43.84 0 2508151..2508426 + 91 196157123 - MADE_02322 - hypothetical protein 2299 41.80 0 2508521..2508886 - 121 196157124 - MADE_02323 - hypothetical protein 2300 47.01 0 2509020..2510840 + 606 196157125 - MADE_02324 - zinc-dependent metallopeptidase 2301 44.35 0 2511105..2513954 + 949 196157126 - MADE_02325 - GGDEF domain protein 2302 45.02 0 2514172..2514804 + 210 196157127 - MADE_02326 - hypothetical protein 2303 46.14 0 2515004..2515573 - 189 196157128 - MADE_02327 - Pyridoxamine 5-phosphate oxidase-related, FMN-binding protein 2304 45.58 0 2515582..2516373 - 263 196157129 - MADE_02328 - putative metallo-dependent hydrolase 2305 46.40 0 2516434..2517321 - 295 196157130 - MADE_02329 - DNA polymerase III subunit delta 2306 47.98 0 2517321..2517989 - 222 196157131 - MADE_02330 - thymidylate kinase 2307 45.32 0 2518056..2519006 - 316 196157132 - MADE_02331 - hypothetical protein 2308 45.82 0 2519168..2520016 - 282 196157133 - MADE_02332 - 4-amino-4-deoxychorismate lyase 2309 48.79 +1 2520172..2521374 - 400 196157134 - MADE_02333 - 3-oxoacyl-(acyl-carrier-protein) synthase II 2310 46.00 0 2521352..2522164 - 270 196157135 - MADE_02334 - fatty acid/phospholipid synthesis protein 2311 50.88 +1 2522210..2522380 - 56 196157136 - MADE_02335 - 50S ribosomal protein L32 2312 45.70 0 2522384..2523046 - 220 196157137 - MADE_02336 - hypothetical protein 2313 46.63 0 2523114..2523692 + 192 196157138 - MADE_02337 - maf protein, putative 2314 44.82 0 2523711..2524415 - 234 196157139 - MADE_02338 - putative phosphoglycolate phosphatase, contains a phosphatase-like domain 2315 47.88 0 2524423..2525364 - 313 196157140 - MADE_02339 - ribosomal large subunit pseudouridine synthase C (pseudouridylate synthase) (uracil hydrolyase 2316 37.12 -2 2525419..2525550 + 43 196157141 - MADE_02340 - hypothetical protein 2317 39.17 -1 2525592..2525711 + 39 196157142 - MADE_02341 - hypothetical protein 2318 49.38 +1 2526167..2529562 + 1131 196157143 - MADE_02342 - RNase E 2319 48.68 +1 2529695..2530789 + 364 196157144 - MADE_02343 - hypothetical protein 2320 47.04 0 2530989..2531360 + 123 196157145 - MADE_02344 - Cryptic haloacid dehalogenase 1 2321 47.15 0 2531412..2531867 - 151 196157146 - MADE_02345 - elaA protein 2322 34.75 -2 2531869..2532009 - 46 196157147 - MADE_02346 - hypothetical protein 2323 49.44 +1 2532252..2534591 + 779 196157148 - MADE_02347 - putative formate dehydrogenase oxidoreductase protein 2324 39.47 -1 2534649..2534762 + 37 196157149 - MADE_02348 - hypothetical protein 2325 44.97 0 2535320..2535955 - 211 196157150 - MADE_02349 - molybdopterin guanine dinucleotide synthase 2326 44.94 0 2536047..2536856 - 269 196157151 - MADE_02350 - putative zinc metalloendopeptidase 2327 46.56 0 2537221..2537772 - 183 196157152 - MADE_02351 - nucleoprotein/polynucleotide-associated enzyme 2328 47.16 0 2537909..2540569 - 886 196157153 - MADE_02352 - DNA topoisomerase I 2329 41.53 0 2540713..2540895 - 60 196157154 - MADE_02353 - hypothetical protein 2330 48.17 0 2540967..2542307 + 446 196157155 - MADE_02354 - Succinylarginine dihydrolase 2331 45.90 0 2542363..2544900 - 845 196157156 - MADE_02355 - invasin domain protein 2332 44.47 0 2545015..2546361 + 448 196157157 - MADE_02356 - putative proton/glutamate symporter 2333 44.34 0 2546537..2547763 - 408 196157158 - MADE_02357 - ABC transporter integral membrane subunit 2334 47.87 0 2547750..2548478 - 242 196157159 - MADE_02358 - ABC transporter ATP-binding subunit 2335 41.10 -1 2548587..2548805 + 72 196157160 - MADE_02359 - translation initiation factor IF-1 2336 45.38 0 2548986..2550056 - 356 196157161 - MADE_02360 - ATP-dependent specificity subunit of clpA-clpP serine protease 2337 46.24 0 2550091..2550555 - 154 196157162 - MADE_02361 - ATP-dependent Clp protease, ATP-binding subunit ClpA 2338 47.52 0 2550558..2551262 - 234 196157163 - MADE_02362 - ATP-dependent Clp protease, ATP-binding subunit ClpA 2339 43.30 0 2551287..2551607 - 106 196157164 - MADE_02363 - ATP-dependent Clp protease adaptor protein ClpS 2340 47.03 0 2551849..2552067 + 72 196157165 - MADE_02364 - stress response protein CspD 2341 39.84 -1 2552023..2552145 - 40 196157166 - MADE_02365 - hypothetical protein 2342 45.77 0 2552604..2554823 - 739 196157167 - MADE_02366 - isocitrate dehydrogenase, NADP-dependent 2343 45.86 0 2555335..2555877 + 180 196157168 - MADE_02367 - ribosomal large subunit pseudouridine synthase E 2344 46.22 0 2556281..2557390 + 369 196157169 - MADE_02368 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 2345 47.85 0 2557390..2558016 + 208 196157170 - MADE_02369 - hypothetical protein 2346 45.69 0 2558030..2559397 + 455 196157171 - MADE_02370 - adenylosuccinate lyase 2347 41.33 -1 2559388..2559537 - 49 196157172 - MADE_02371 - hypothetical protein 2348 44.65 0 2559539..2560192 + 217 196157173 - MADE_02372 - adenylate/guanylate cyclase 2349 47.64 0 2560365..2561531 + 388 196157174 - MADE_02373 - putative enzyme with RmlC-like domain 2350 46.41 0 2561541..2561999 + 152 196157175 - MADE_02374 - putative Glr3403 protein 2351 44.36 0 2562016..2562432 - 138 196157176 - MADE_02375 - hypothetical protein 2352 40.43 -1 2562453..2562593 - 46 196157177 - MADE_02376 - hypothetical protein 2353 46.76 0 2562751..2562966 + 71 196157178 - MADE_02377 - integral membrane protein TerC 2354 48.13 0 2563331..2563837 + 168 196157179 - MADE_02378 - Ferredoxin/oxidoreductase 2355 49.16 +1 2563834..2566095 + 753 196157180 - MADE_02379 - Twin-arginine translocation pathway signal 2356 43.35 0 2566458..2567495 - 345 196157181 - MADE_02380 - ISCps1, transposase 2357 40.67 -1 2568041..2568190 - 49 196157182 - MADE_02381 - hypothetical protein 44.90 MEAN 3.40 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0