version 1.0
Alteromonas macleodii 'Deep ecotype', complete genome - 1..4412282 4072 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2190 38.30 -1 2374511..2374792 + 93 196157015 - MADE_02214 - hypothetical protein 2191 45.81 0 2374836..2376125 - 429 196157016 - MADE_02215 - CN5-related N-acetyltransferase 2192 44.42 0 2376122..2377609 - 495 196157017 - MADE_02216 - glutathione synthase 2193 41.37 -1 2377861..2378109 + 82 196157018 - MADE_02217 - putative sodium/calcium exchange protein 2194 46.62 0 2378410..2379816 + 468 196157019 - MADE_02218 - putative amino acid permease 2195 49.32 +1 2379943..2380599 - 218 196157020 - MADE_02219 - predicted transcription negative regulator 2196 46.09 0 2380650..2381276 - 208 196157021 - MADE_02220 - hypothetical protein 2197 43.92 0 2381406..2381915 + 169 196157022 - MADE_02221 - Thioesterase superfamily protein 2198 48.59 +1 2382083..2384644 - 853 196157023 - MADE_02222 - putative TonB-dependent receptor 2199 42.69 0 2385229..2385399 - 56 196157024 - MADE_02223 - hypothetical protein 2200 43.17 0 2385589..2385771 + 60 196157025 - MADE_02224 - hypothetical protein 2201 44.75 0 2385843..2386394 - 183 196157026 - MADE_02225 - putative alkylhydroperoxidase AhpD family core domain protein MED92 2202 43.49 0 2386547..2387137 + 196 196157027 - MADE_02226 - transcriptional regulator, TetR family protein 2203 43.06 0 2387216..2387698 - 160 196157028 - MADE_02227 - hypothetical protein 2204 40.68 -1 2387784..2387960 - 58 196157029 - MADE_02228 - putative orphan protein 2205 47.75 0 2387960..2389159 - 399 196157030 - MADE_02229 - 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 2206 48.33 +1 2389478..2390911 + 477 196157031 - MADE_02230 - tRNA-i(6)A37 thiotransferase enzyme MiaB 2207 48.34 +1 2390949..2392061 + 370 196157032 - MADE_02231 - putative ATP-binding protein in pho regulon 2208 43.61 0 2392058..2392534 + 158 196157033 - MADE_02232 - hypothetical protein 2209 43.47 0 2392650..2393507 + 285 196157034 - MADE_02233 - Mg/Co transporter 2210 47.66 0 2393612..2395126 + 504 196157035 - MADE_02234 - apolipoprotein N-acyltransferase 2211 42.77 0 2395279..2395596 + 105 196157036 - MADE_02235 - plasmid stabilization system 2212 42.97 0 2395590..2395838 - 82 196157037 - MADE_02236 - Antitoxin of toxin-antitoxin system Phd 2213 47.76 0 2396030..2398108 - 692 196157038 - MADE_02237 - phosphate acetyltransferase 2214 46.53 0 2398213..2399394 - 393 196157039 - MADE_02238 - acetate/propionate kinase 2215 42.32 0 2399803..2400258 + 151 196157040 - MADE_02239 - small heat shock protein 2216 45.04 0 2400368..2400760 - 130 196157041 - MADE_02240 - hypothetical protein 2217 45.74 0 2400846..2401385 - 179 196157042 - MADE_02241 - hypothetical protein 2218 43.72 0 2401647..2402108 - 153 196157043 - MADE_02242 - Transcription elongation factor GreA 2219 49.04 +1 2402241..2405462 - 1073 196157044 - MADE_02243 - carbamoyl-phosphate synthase large subunit 2220 45.50 0 2405476..2406798 - 440 196157045 - MADE_02244 - carbamoyl-phosphate synthase small subunit 2221 47.01 0 2406959..2407762 - 267 196157046 - MADE_02245 - dihydrodipicolinate reductase 2222 45.26 0 2408172..2408867 + 231 196157047 - MADE_02246 - cytochrome b561 family protein 2223 43.45 0 2408908..2409075 + 55 196157048 - MADE_02247 - hypothetical protein 2224 47.72 0 2409116..2411026 - 636 196157049 - MADE_02248 - Propionyl CoA synthase 2225 42.26 0 2411169..2413745 - 858 196157050 - MADE_02249 - sensory box/GGDEF/EAL domain protein 2226 37.72 -2 2414083..2414196 + 37 196157051 - MADE_02250 - hypothetical protein 2227 46.00 0 2414193..2414705 - 170 196157052 - MADE_02251 - cytochrome c 2228 49.49 +1 2415134..2416303 - 389 196157053 - MADE_02252 - Chaperone protein dnaJ 2229 45.78 0 2416498..2418426 - 642 196157054 - MADE_02253 - Chaperone protein dnaK 2230 48.74 +1 2418544..2419179 - 211 196157055 - MADE_02254 - heat shock protein GrpE 2231 40.35 -1 2419170..2419283 - 37 196157056 - MADE_02255 - hypothetical protein 2232 45.75 0 2419428..2422448 + 1006 196157057 - MADE_02256 - Multidomain protein, contains Na+/proline symporter PutP-like domain, sensory histidine kinase and receiver domain 2233 47.95 0 2422445..2423272 - 275 196157058 - MADE_02257 - putative transposase 2234 45.73 0 2423485..2423976 - 163 196157059 - MADE_02258 - transposase IS3/IS911 family protein 2235 44.35 0 2424061..2424432 + 123 196157060 - MADE_02259 - two-component sensor histidine kinase 2236 43.65 0 2424473..2425141 - 222 196157061 - MADE_02260 - Response regulator, LuxR family (CheY, HTH domains) 2237 47.20 0 2425342..2427720 - 792 196157062 - MADE_02261 - putative TonB-dependent receptor 2238 48.87 +1 2428044..2429330 + 428 196157063 - MADE_02262 - GntP family permease 2239 34.21 -2 2429317..2429430 - 37 196157064 - MADE_02263 - hypothetical protein 2240 45.82 0 2429395..2430828 + 477 196157065 - MADE_02264 - homoserine O-acetyltransferase 2241 47.18 0 2430825..2431886 + 353 196157066 - MADE_02265 - poly (3-hydroxybutyrate) depolymerase 2242 47.53 0 2431879..2432646 + 255 196157067 - MADE_02266 - putative 3-hydroxybutyrate dehydrogenase 2243 49.10 +1 2432767..2433927 - 386 196157068 - MADE_02267 - alcohol dehydrogenase, iron-containing 2244 45.32 0 2434264..2435139 + 291 196157069 - MADE_02268 - NAD kinase 2245 45.88 0 2435395..2435904 + 169 196157070 - MADE_02269 - stress response DNA-binding protein Dps 2246 44.54 0 2436213..2437898 + 561 196157071 - MADE_02270 - ATPase involved in DNA repair, RecN 2247 37.84 -2 2438158..2438379 + 73 196157072 - MADE_02271 - SmpA/OmlA family protein 2248 45.57 0 2438489..2439142 + 217 196157073 - MADE_02272 - thiopurine S-methyltransferase family protein 2249 44.55 0 2439308..2440618 - 436 196157074 - MADE_02273 - HlyD family secretion protein 2250 46.58 0 2440621..2442303 - 560 196157075 - MADE_02274 - Type I secretion system ATPase, PrtD 2251 42.02 0 2442347..2443048 - 233 196157076 - MADE_02275 - hypothetical protein 2252 46.84 0 2443264..2462094 - 6276 196157077 - MADE_02276 - vcbs repeat-containing protein 2253 41.86 0 2462139..2462267 - 42 196157078 - MADE_02277 - hypothetical protein 2254 46.38 0 2462787..2462924 - 45 196157079 - MADE_02278 - hypothetical protein 2255 43.07 0 2463489..2464628 - 379 196157080 - MADE_02279 - hypothetical protein 2256 42.41 0 2465470..2466141 + 223 196157081 - MADE_02280 - hypothetical protein 2257 44.85 0 2466178..2466750 + 190 196157082 - MADE_02281 - Acetyltransferase (isoleucine patch superfamily) protein 2258 44.78 0 2466937..2467740 - 267 196157083 - MADE_02282 - 2,5-diketo-D-gluconate reductase B 2259 49.50 +1 2467972..2468868 - 298 196157084 - MADE_02283 - pseudouridine synthase (makes pseudouridine2605 in 23 S RNA) 2260 45.45 0 2468909..2469502 - 197 196157085 - MADE_02284 - hypothetical protein 2261 43.87 0 2469489..2470352 - 287 196157086 - MADE_02285 - chromosome segregation and condensation protein ScpA 2262 46.70 0 2470462..2471082 - 206 196157087 - MADE_02286 - Sua5/YciO/YrdC/YwlC family protein 2263 47.32 0 2471234..2472127 - 297 196157088 - MADE_02287 - PHP domain protein 2264 48.37 +1 2472407..2474095 + 562 196157089 - MADE_02288 - anthranilate synthase component I 2265 47.71 0 2474092..2474724 + 210 196157090 - MADE_02289 - glutamine amido-transferase 2266 50.39 +1 2474717..2475748 + 343 196157091 - MADE_02290 - anthranilate phosphoribosyltransferase 2267 46.95 0 2475741..2477150 + 469 196157092 - MADE_02291 - bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase 2268 48.14 0 2477172..2478353 + 393 196157093 - MADE_02292 - tryptophan synthase, beta protein 2269 49.75 +1 2478371..2479162 + 263 196157094 - MADE_02293 - tryptophan synthase subunit alpha 2270 53.26 +2 2479177..2479467 + 96 196157095 - MADE_02294 - hypothetical protein 2271 44.67 0 2479744..2480184 - 146 196157096 - MADE_02295 - general stress protein 2272 45.99 0 2481086..2481322 + 78 196157097 - MADE_02296 - Propeptide, PepSY amd peptidase M4 2273 43.26 0 2481324..2481998 + 224 196157098 - MADE_02297 - response regulator in two-component regulatory system with PhoQ 2274 42.79 0 2481995..2483326 + 443 196157099 - MADE_02298 - sensor histidine kinase 2275 42.58 0 2483677..2484714 - 345 196157100 - MADE_02299 - hypothetical protein 2276 36.04 -2 2484794..2485162 + 122 196157101 - MADE_02300 - D-erythro-7,8-dihydroneopterin triphosphate epimerase 2277 46.55 0 2485198..2486082 + 294 196157102 - MADE_02301 - putative sugar nucleotide epimerase 2278 45.94 0 2486413..2488935 - 840 196157103 - MADE_02302 - ABC-type transport system, permease component 2279 45.06 0 2488936..2489634 - 232 196157104 - MADE_02303 - putative Lipoprotein releasing system ATP-binding component of ABC transporter 2280 39.27 -1 2489651..2490307 + 218 196157105 - MADE_02304 - lipase/acylhydrolase, GDSL family protein 2281 51.37 +1 2490354..2490536 + 60 196157106 - MADE_02305 - hypothetical protein 2282 41.44 -1 2490779..2491753 + 324 196157107 - MADE_02306 - hypothetical protein 2283 44.73 0 2491771..2492709 - 312 196157108 - MADE_02307 - NifR3/Smm1 family protein 2284 39.19 -1 2493170..2493391 - 73 196157109 - MADE_02308 - hypothetical protein 2285 45.65 0 2493451..2494359 - 302 196157110 - MADE_02309 - Zn-dependent enzyme from deacylase/carboxypeptidase superfamily protein 2286 42.62 0 2495609..2496448 - 279 196157111 - MADE_02310 - glutamyl-tRNA synthetase 2287 46.17 0 2496439..2496960 - 173 196157112 - MADE_02311 - hypothetical protein 2288 43.70 0 2497437..2498111 + 224 196157113 - MADE_02312 - putative unknown enzyme 2289 48.59 +1 2498104..2499060 + 318 196157114 - MADE_02313 - putative transcriptional regulator 44.90 MEAN 3.40 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0