version 1.0
Alteromonas macleodii 'Deep ecotype', complete genome - 1..4412282 4072 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 171 45.09 0 184089..184556 - 155 196154996 - MADE_00173 - hypothetical protein 172 47.40 0 184896..186530 + 544 196154997 - MADE_00174 - Transposase, IS4 family protein 173 42.20 0 186771..187943 + 390 196154998 - MADE_00175 - hypothetical protein ycgF 174 48.93 +1 187992..188876 - 294 196154999 - MADE_00176 - chromosome replication initiation inhibitor protein 175 47.10 0 189069..189671 + 200 196155000 - MADE_00177 - arginine exporter protein 176 51.57 +1 189779..190096 + 105 196155001 - MADE_00178 - putative exporter protein (SMR family) 177 47.01 0 190098..190214 + 38 196155002 - MADE_00179 - hypothetical protein 178 49.79 +1 190211..190927 - 238 196155003 - MADE_00180 - hypothetical protein 179 44.74 0 191092..191775 + 227 196155004 - MADE_00181 - DnaJ-related protein 180 48.52 +1 192087..193232 + 381 196155005 - MADE_00182 - acriflavine resistance protein a precursor 181 49.16 +1 193254..196355 + 1033 196155006 - MADE_00183 - acriflavine resistance protein B 182 47.39 0 196413..196910 + 165 196155007 - MADE_00184 - hypothetical protein 183 47.46 0 197117..198964 + 615 196155008 - MADE_00185 - fused 4-Hydroxybutyrate CoA-transferase/acetyltransferase domain of GNAT 184 49.44 +1 198961..199941 + 326 196155009 - MADE_00186 - Histone deacetylase/AcuC/AphA family protein 185 45.56 0 199984..200727 - 247 196155010 - MADE_00187 - glutaredoxin 186 51.25 +1 200849..201367 - 172 196155011 - MADE_00188 - Secreted protein, containing thioredoxin-like domain 187 48.52 +1 201400..202881 - 493 196155012 - MADE_00189 - putative methyl-accepting chemotaxis protein 188 43.87 0 203047..203919 + 290 196155013 - MADE_00190 - hypothetical protein 189 49.28 +1 204061..205383 - 440 196155014 - MADE_00191 - hypothetical protein 190 42.76 0 205552..206166 - 204 196155015 - MADE_00192 - GTP cyclohydrolase II 191 45.03 0 206299..209136 - 945 196155016 - MADE_00193 - predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 192 46.54 0 209290..209607 - 105 196155017 - MADE_00194 - hypothetical protein 193 46.79 0 209712..210380 + 222 196155018 - MADE_00195 - Glutathione S-transferase-like protein 194 49.08 +1 210395..212236 - 613 196155019 - MADE_00196 - ATP-dependent DNA helicase 195 49.18 +1 212583..213920 + 445 196155020 - MADE_00197 - putative Magnesium transporter 196 46.73 0 214090..215022 + 310 196155021 - MADE_00198 - Conserved membrane protein RarD 197 45.67 0 215047..216327 - 426 196155022 - MADE_00199 - response regulator/GGDEF domain protein 198 48.07 0 216370..218541 - 723 196155023 - MADE_00200 - DNA helicase II 199 49.19 +1 218970..219776 + 268 196155024 - MADE_00201 - serine acetyltransferase 200 47.64 0 219868..220608 - 246 196155025 - MADE_00202 - HAD-superfamily hydrolase, subfamily IA, variant 201 46.69 0 220630..221550 - 306 196155026 - MADE_00203 - tyrosine recombinase 202 43.68 0 221556..222251 - 231 196155027 - MADE_00204 - uncharacterized conserved protein, YigA-like protein 203 45.80 0 222248..223057 - 269 196155028 - MADE_00205 - diaminopimelate epimerase 204 48.12 0 223114..224364 - 416 196155029 - MADE_00206 - putative diaminopimelate decarboxylase 205 47.19 0 224364..224594 - 76 196155030 - MADE_00207 - hypothetical protein 206 46.00 0 224607..225656 - 349 196155031 - MADE_00208 - glycosyl transferase 207 45.47 0 225676..226194 - 172 196155032 - MADE_00209 - phosphoesterase, PA-phosphatase related 208 47.12 0 226540..227025 + 161 196155033 - MADE_00210 - ribonuclease activity regulator protein RraA 209 48.08 0 227158..227964 - 268 196155034 - MADE_00211 - putative S1/P1 Nuclease 210 47.87 0 227967..228599 - 210 196155035 - MADE_00212 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 211 47.90 0 228673..230031 - 452 196155036 - MADE_00213 - UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 212 46.93 0 230345..231322 + 325 196155037 - MADE_00214 - fructose-1,6-bisphosphatase 213 44.07 0 231487..232017 + 176 196155038 - MADE_00215 - inorganic pyrophosphatase 214 35.95 -2 232029..232181 - 50 196155039 - MADE_00216 - hypothetical protein 215 47.80 0 232180..232656 + 158 196155040 - MADE_00217 - lipoprotein, putative 216 46.64 0 232677..233375 - 232 196155041 - MADE_00218 - 2OG-Fe(II) oxygenase 217 40.71 -1 233398..233817 - 139 196155042 - MADE_00219 - thioesterase family protein 218 47.44 0 234003..235505 + 500 196155043 - MADE_00220 - putative heat shock protein 70 family protein 219 42.55 0 235571..235711 - 46 196155044 - MADE_00221 - excinuclease ABC subunit A 220 38.46 -1 235681..235797 + 38 196155045 - MADE_00222 - hypothetical protein 221 48.62 +1 235942..238773 - 943 196155046 - MADE_00223 - excinuclease ABC subunit A 222 41.67 0 239224..239355 + 43 196155047 - MADE_00224 - hypothetical protein 223 48.46 +1 239379..240707 + 442 196155048 - MADE_00225 - transporter, putative 224 47.86 0 240776..241360 + 194 196155049 - MADE_00226 - hypothetical phosphatase/phosphohexomutase 225 43.77 0 241435..242028 - 197 196155050 - MADE_00227 - hypothetical protein 226 42.36 0 242261..243124 + 287 196155051 - MADE_00228 - hypothetical protein 227 46.78 0 243556..244611 - 351 196155052 - MADE_00229 - putative GalR repressor of contiguous operon, likely to bind a galactoside 228 45.45 0 244884..245906 + 340 196155053 - MADE_00230 - aldose 1-epimerase 229 46.67 0 246142..247131 + 329 196155054 - MADE_00231 - galactose-1-phosphate uridylyltransferase 230 48.33 +1 247124..248263 + 379 196155055 - MADE_00232 - galactokinase 231 37.25 -2 248405..248608 - 67 196155056 - MADE_00233 - hypothetical protein 232 45.04 0 248631..250193 + 520 196155057 - MADE_00234 - putative sodium/hexose cotransport protein 233 50.93 +1 250458..251048 + 196 196155058 - MADE_00235 - single-strand binding protein 234 41.22 -1 251322..252221 + 299 196155059 - MADE_00236 - hypothetical protein 235 47.11 0 252438..255014 - 858 196155060 - MADE_00237 - membrane of secreted protein 236 49.75 +1 255032..256048 - 338 196155061 - MADE_00238 - UDP-glucose 4-epimerase 237 45.46 0 256059..258350 - 763 196155062 - MADE_00239 - beta-galactosidase 238 42.29 0 258349..258549 + 66 196155063 - MADE_00240 - hypothetical protein 239 45.90 0 258519..261176 - 885 196155064 - MADE_00241 - TonB-dependent receptor 240 48.01 0 261622..263106 - 494 196155065 - MADE_00242 - probable carbohydrate kinase 241 43.48 0 263268..264026 + 252 196155066 - MADE_00243 - Glycerol-3-phosphate regulon repressor 242 46.20 0 264290..265828 + 512 196155067 - MADE_00244 - sn-glycerol-3-phosphate dehydrogenase FAD binding; dioxygen as acceptor 243 41.88 0 265973..266557 + 194 196155068 - MADE_00245 - hypothetical protein 244 44.84 0 266680..267183 + 167 196155069 - MADE_00246 - hypothetical protein 245 44.81 0 267350..268264 + 304 196155070 - MADE_00247 - putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshI (pilus type IV) 246 42.58 0 268261..268887 + 208 196155071 - MADE_00248 - putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshI (pilus type IV) 247 45.37 0 268862..269509 + 215 196155072 - MADE_00249 - putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshJ (pilus type IV) 248 43.94 0 269516..269845 + 109 196155073 - MADE_00250 - putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshK (pilus type IV), lipoprotein 249 46.32 0 269868..271577 + 569 196155074 - MADE_00251 - putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshL (pilus type IV) 250 47.18 0 271580..272482 + 300 196155075 - MADE_00252 - putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshM (pilus type IV) 251 49.88 +1 272479..273735 + 418 196155076 - MADE_00253 - putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshN (pilus type IV) 252 47.05 0 273735..275447 + 570 196155077 - MADE_00254 - putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshE (pilus type IV) 253 43.77 0 275447..276682 + 411 196155078 - MADE_00255 - putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshG (pilus type IV) 254 44.65 0 276711..277205 + 164 196155079 - MADE_00256 - hypothetical protein 255 48.64 +1 277250..277837 + 195 196155080 - MADE_002567 - Pilin protein 256 46.14 0 277860..278351 + 163 196155081 - MADE_00258 - MSHA pilin protein MshA 257 47.62 0 278353..278814 + 153 196155082 - MADE_00259 - putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshC (pilus type IV) 258 44.99 0 278789..279397 + 202 196155083 - MADE_00260 - putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshD (pilus type IV) 259 42.20 0 279397..280152 + 251 196155084 - MADE_00261 - Tfp pilus assembly protein PilW 260 43.94 0 280142..280603 + 153 196155085 - MADE_00262 - putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshP (pilus type IV) 261 46.68 0 280783..284289 + 1168 196155086 - MADE_00263 - putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshQ (pilus type IV) 262 48.75 +1 284644..285687 + 347 196155087 - MADE_00264 - rod shape-determining protein MreB 263 47.84 0 285782..286615 + 277 196155088 - MADE_00265 - Rod shape-determining protein 264 44.66 0 286626..287084 + 152 196155089 - MADE_00266 - rod shape-determining protein MreD 265 47.04 0 287121..287711 + 196 196155090 - MADE_00267 - septum formation protein Maf 266 45.54 0 287708..289174 + 488 196155091 - MADE_00268 - cytoplasmic axial filament protein 267 46.17 0 289201..293196 + 1331 196155092 - MADE_00269 - putative protease 268 46.15 0 293189..294007 + 272 196155093 - MADE_00270 - predicted amidohydrolase, nitrilase family protein 269 49.90 +1 293970..295442 + 490 196155094 - MADE_00271 - putative suppressor of CsrA inhibitory activity; putative peptidase; involved in the control of DNA gyrase 270 45.70 0 295542..296099 - 185 196155095 - MADE_00272 - hypothetical protein 44.90 MEAN 3.40 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0