version 1.0
Alteromonas macleodii 'Deep ecotype', complete genome - 1..4412282 4072 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1903 45.57 0 2067610..2068704 - 364 196156728 - MADE_01919 - 6-phosphofructokinase 1904 41.61 0 2068783..2069664 + 293 196156729 - MADE_01920 - hypothetical protein 1905 44.52 0 2070099..2070554 - 151 196156730 - MADE_01921 - possible thioesterase protein 1906 45.33 0 2070582..2070806 - 74 196156731 - MADE_01922 - transcriptional regulator, MarR family with acetyltransferase activity 1907 45.92 0 2071051..2072154 - 367 196156732 - MADE_01923 - transposase 1908 44.22 0 2072274..2072420 - 48 196156733 - MADE_01924 - transposase 1909 46.55 0 2072871..2073884 - 337 196156734 - MADE_01925 - quinone oxidoreductase 1910 47.72 0 2073901..2074908 - 335 196156735 - MADE_01926 - Zinc-containing alcohol dehydrogenase superfamily protein 1911 47.69 0 2074983..2075741 - 252 196156736 - MADE_01927 - putative oxidoreductase 1912 45.07 0 2075888..2076790 + 300 196156737 - MADE_01928 - transcriptional regulator, LysR family protein 1913 36.43 -2 2077852..2078271 - 139 196156738 - MADE_01929 - hypothetical protein 1914 38.62 -1 2078437..2079060 - 207 196156739 - MADE_01930 - possible peptidase 1915 45.99 0 2079643..2081127 + 494 196156740 - MADE_01931 - probable transposase protein, Y4bF 1916 41.98 0 2081915..2082712 - 265 196156741 - MADE_01932 - putative DNA polymerase related protein 1917 43.40 0 2082729..2083970 - 413 196156742 - MADE_01933 - Radical SAM 1918 38.10 -1 2084107..2084232 + 41 196156743 - MADE_01934 - hypothetical protein 1919 42.60 0 2084291..2085931 - 546 196156744 - MADE_01935 - Response regulator with TPR repeat 1920 46.31 0 2086053..2086607 + 184 196156745 - MADE_01936 - putative fumarate reductase flavoprotein subunit 1921 45.58 0 2086798..2087769 + 323 196156746 - MADE_01937 - predicted sulfurtransferase 1922 41.37 -1 2087822..2088070 + 82 196156747 - MADE_01938 - putative signal transduction protein with EFhand domain 1923 45.70 0 2088312..2089637 - 441 196156748 - MADE_01939 - ATP-dependent RNA helicase, DEAD box family protein 1924 47.55 0 2089847..2090500 - 217 196156749 - MADE_01940 - 3-oxoacid CoA-transferase subunit B family enzyme 1925 46.75 0 2090500..2091207 - 235 196156750 - MADE_01941 - putative succinyl-CoA transferase, alpha subunit 1926 44.68 0 2091351..2092214 + 287 196156751 - MADE_01942 - probable transcriptional regulator 1927 43.03 0 2092285..2093037 - 250 196156752 - MADE_01943 - hypothetical protein 1928 41.70 0 2093139..2093843 - 234 196156753 - MADE_01944 - Signal transduction histidine kinase 1929 41.13 -1 2094053..2095027 + 324 196156754 - MADE_01945 - transcriptional regulator for cysteine regulon 1930 47.16 0 2095111..2096484 - 457 196156755 - MADE_01946 - L-serine dehydratase 1 1931 46.77 0 2096717..2097289 - 190 196156756 - MADE_01947 - NTP pyrophosphohydrolase, NUDIX family protein 1932 45.56 0 2097338..2098768 - 476 196156757 - MADE_01948 - P-aminobenzoate synthetase, component I 1933 47.65 0 2099086..2100615 + 509 196156758 - MADE_01949 - fumarate hydratase, class I 1934 38.10 -1 2100608..2100838 - 76 196156759 - MADE_01950 - hypothetical protein 1935 43.18 0 2100840..2102129 + 429 196156760 - MADE_01951 - RmuC 1936 46.14 0 2102174..2106139 - 1321 196156761 - MADE_01952 - serine protease, subtilase family protein 1937 41.73 0 2106388..2107137 - 249 196156762 - MADE_01953 - ISSod6, transposase 1938 45.54 0 2107556..2108743 + 395 196156763 - MADE_01954 - Alpha keto acid dehydrogenase complex, E1 component, alpha subunit 1939 46.32 0 2108743..2109720 + 325 196156764 - MADE_01955 - 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 1940 44.71 0 2109738..2111399 + 553 196156765 - MADE_01956 - Apha keto acid dehydrogenase complex, E2 component 1941 44.37 0 2111568..2112446 + 292 196156766 - MADE_01957 - hypothetical protein 1942 42.56 0 2112540..2114414 + 624 196156767 - MADE_01958 - Serine/threonine protein kinase 1943 46.14 0 2114407..2115273 + 288 196156768 - MADE_01959 - Acyl-CoA thioesterase II 1944 45.99 0 2115421..2116842 + 473 196156769 - MADE_01960 - amidophosphoribosyltransferase 1945 45.33 0 2116902..2117501 - 199 196156770 - MADE_01961 - hypothetical protein 1946 43.93 0 2117708..2118490 - 260 196156771 - MADE_01962 - tRNA-(MS 2)O6-A-hydroxylase 1947 42.24 0 2118657..2119262 + 201 196156772 - MADE_01963 - hypothetical protein 1948 45.24 0 2119439..2121034 + 531 196156773 - MADE_01964 - serine carboxypeptidase 1949 45.21 0 2121100..2122008 - 302 196156774 - MADE_01965 - transcriptional regulator, LysR family protein 1950 44.51 0 2122031..2123122 + 363 196156775 - MADE_01966 - oxidoreductase, zinc-binding protein 1951 44.64 0 2123402..2125471 + 689 196156776 - MADE_01967 - Catalase 1952 48.26 0 2125468..2125983 - 171 196156777 - MADE_01968 - hypothetical protein 1953 46.67 0 2126402..2127391 - 329 196156778 - MADE_01969 - alcohol dehydrogenase, zinc-containing 1954 47.52 0 2127565..2127987 + 140 196156779 - MADE_01970 - transcriptional regulator 1955 45.49 0 2128090..2129586 - 498 196156780 - MADE_01971 - sucrose phosphorylase 1956 46.24 0 2129896..2130081 - 61 196156781 - MADE_01972 - hypothetical protein 1957 47.12 0 2130190..2131959 - 589 196156782 - MADE_01973 - band 7 protein 1958 41.63 0 2131979..2132593 - 204 196156783 - MADE_01974 - hypothetical protein 1959 47.66 0 2132826..2133551 - 241 196156784 - MADE_01975 - UDP-2,3-diacylglucosamine hydrolase 1960 42.28 0 2133680..2134171 - 163 196156785 - MADE_01976 - peptidyl-prolyl cis-trans isomerase B 1961 48.08 0 2134335..2135717 + 460 196156786 - MADE_01977 - cysteinyl-tRNA synthetase 1962 43.90 0 2136031..2136456 - 141 196156787 - MADE_01978 - halomucin 1963 44.41 0 2136577..2137614 - 345 196156788 - MADE_01979 - hypothetical protein 1964 46.67 0 2137643..2139307 - 554 196156789 - MADE_01980 - putative membrane-bound lytic murein transglycosylase 1965 49.12 +1 2139372..2140163 - 263 196156790 - MADE_01981 - Hydroxyacylglutathione hydrolase 1966 45.08 0 2140212..2141105 + 297 196156791 - MADE_01982 - SAM-dependent methyltransferase 1967 42.86 0 2141285..2142124 - 279 196156792 - MADE_01983 - MscS Mechanosensitive ion channel ei VT8 1968 46.83 0 2142470..2144566 - 698 196156793 - MADE_01984 - methionyl-tRNA synthetase 1969 50.05 +1 2144606..2145712 + 368 196156794 - MADE_01985 - ATP-binding protein, Mrp/Nbp35 family 1970 41.82 0 2145738..2145902 - 54 196156795 - MADE_01986 - hypothetical protein 1971 48.15 0 2145870..2146463 + 197 196156796 - MADE_01987 - deoxycytidine triphosphate deaminase 1972 48.30 0 2146633..2148069 + 478 196156797 - MADE_01988 - Na+/dicarboxylate symporter 1973 43.51 0 2148497..2149822 - 441 196156798 - MADE_01989 - Chromosome segregation ATPase 1974 44.28 0 2150005..2151018 - 337 196156799 - MADE_01990 - hypothetical protein 1975 47.33 0 2151139..2151288 + 49 196156800 - MADE_01991 - hypothetical protein 1976 44.65 0 2151388..2152218 + 276 196156801 - MADE_01992 - short chain dehydrogenase 1977 45.49 0 2152400..2153542 + 380 196156802 - MADE_01993 - predicted aminoglycoside phosphotransferase 1978 45.29 0 2153599..2153991 + 130 196156803 - MADE_01994 - short chain dehydrogenase 1979 44.57 0 2154138..2154662 + 174 196156804 - MADE_01995 - Carbonic anhydrases/acetyltransferase, isoleucine patch superfamily protein 1980 45.80 0 2155251..2156285 + 344 196156805 - MADE_01996 - putative Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 1981 46.21 0 2156589..2156720 - 43 196156806 - MADE_01997 - hypothetical protein 1982 43.11 0 2156749..2157321 + 190 196156807 - MADE_01998 - putative periplasmic immunogenic protein 1983 41.45 -1 2157334..2157789 + 151 196156808 - MADE_01999 - GAF domain-containing protein 1984 40.21 -1 2157792..2158082 + 96 196156809 - MADE_02000 - hypothetical protein 1985 43.50 0 2158099..2158767 + 222 196156810 - MADE_02001 - putative solute/DNA competence effector 1986 44.44 0 2158770..2160812 + 680 196156811 - MADE_02002 - carboxyl-terminal protease Prc 1987 45.91 0 2160934..2162229 + 431 196156812 - MADE_02003 - sodium-dependent symporter family protein 1988 44.31 0 2162301..2163776 + 491 196156813 - MADE_02004 - putative Na+/H+ antiporter NnaC 1989 44.10 0 2163823..2166432 + 869 196156814 - MADE_02005 - aminopeptidase N, a cysteinylglycinase 1990 40.74 -1 2166419..2166661 + 80 196156815 - MADE_02006 - hypothetical protein 1991 46.20 0 2166994..2168361 + 455 196156816 - MADE_02007 - hypothetical protein 1992 44.97 0 2168415..2172950 + 1511 196156817 - MADE_02008 - NAD-specific glutamate dehydrogenase 1993 44.88 0 2173032..2174027 + 331 196156818 - MADE_02009 - dihydroorotate dehydrogenase 1994 47.05 0 2174099..2176198 + 699 196156819 - MADE_02010 - putative RNA methylase 1995 41.67 0 2176297..2176428 + 43 196156820 - MADE_02011 - thiol-disulfide isomerase and thioredoxin i 1996 45.75 0 2176425..2178365 + 646 196156821 - MADE_02012 - ABC transporter, ATP-binding protein 1997 44.61 0 2178856..2180292 - 478 196156822 - MADE_02013 - deoxyribodipyrimidine photolyase, putative 1998 45.05 0 2181716..2183140 + 474 196156823 - MADE_02016 - DNA photolyase 1999 43.47 0 2183144..2184682 + 512 196156824 - MADE_02017 - deoxyribodipyrimidine photolyase-related protein 2000 42.28 0 2184861..2186168 + 435 196156825 - MADE_02018 - predicted membrane protein 2001 38.76 -1 2186485..2186613 - 42 196156826 - MADE_02019 - hypothetical protein 2002 38.95 -1 2187188..2190247 - 1019 196156827 - MADE_02020 - transposase 44.90 MEAN 3.40 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0