version 1.0
Alteromonas macleodii 'Deep ecotype', complete genome - 1..4412282 4072 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1849 48.52 +1 1994352..1995128 - 258 196156674 - MADE_01865 - HesA/MoeB/ThiF family protein 1850 44.34 0 1995347..1996309 + 320 196156675 - MADE_01866 - predicted glutathione S-transferase 1851 44.79 0 1996346..1997209 + 287 196156676 - MADE_01867 - Pirin-like protein 1852 45.11 0 1997539..1998999 + 486 196156677 - MADE_01868 - phosphomannomutase 1853 42.08 0 1999200..1999622 - 140 196156678 - MADE_01869 - hypothetical protein 1854 47.10 0 1999710..2000987 - 425 196156679 - MADE_01870 - Citrate synthase 1855 46.24 0 2001788..2002066 + 92 196156680 - MADE_01871 - putative succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with sdhD 1856 45.40 0 2002060..2002407 + 115 196156681 - MADE_01872 - putative succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with sdhC 1857 47.77 0 2002409..2004181 + 590 196156682 - MADE_01873 - succinate dehydrogenase catalytic subunit(fumarrate reductase) 1858 45.85 0 2004196..2004906 + 236 196156683 - MADE_01874 - succinate dehydrogenase catalytic subunit 1859 47.30 0 2005081..2007900 + 939 196156684 - MADE_01875 - 2-oxoglutarate decarboxylase 1860 46.23 0 2007910..2009421 + 503 196156685 - MADE_01876 - dihydrolipoyltranssuccinate transferase, component of the 2-oxoglutarate dehydrogenase complex 1861 47.04 0 2009574..2010740 + 388 196156686 - MADE_01877 - succinyl-CoA synthetase subunit beta 1862 46.16 0 2010740..2011612 + 290 196156687 - MADE_01878 - Succinyl-CoA synthetase, alpha subunit 1863 45.83 0 2011941..2014757 + 938 196156688 - MADE_01879 - TonB-dependent receptor 1864 43.98 0 2014886..2016406 + 506 196156689 - MADE_01880 - putative tryptophan halogenase 1865 46.38 0 2016697..2019747 + 1016 196156690 - MADE_01881 - TonB-dependent receptor 1866 47.21 0 2019744..2024162 + 1472 196156691 - MADE_01882 - putative pullulanase 1867 45.25 0 2024338..2025201 + 287 196156692 - MADE_01883 - hypothetical protein 1868 37.40 -2 2025700..2025822 + 40 196156693 - MADE_01884 - hypothetical protein 1869 42.08 0 2025844..2026392 + 182 196156694 - MADE_01885 - putative cold-shock RNA methyltransferase 1870 41.25 -1 2026486..2027382 + 298 196156695 - MADE_01886 - Uvs051 1871 46.17 0 2027565..2029457 + 630 196156696 - MADE_01887 - putative glycosidase 1872 44.03 0 2029653..2031587 + 644 196156697 - MADE_01888 - putative alpha-amylase 1873 46.29 0 2031626..2033107 + 493 196156698 - MADE_01889 - sugar transporter 1874 45.43 0 2033109..2034803 + 564 196156699 - MADE_01890 - cyclomaltodextrin glucanotransferase 1875 44.48 0 2034981..2036012 - 343 196156700 - MADE_01891 - putative sugar-binding protein 1876 45.38 0 2036301..2037968 + 555 196156701 - MADE_01892 - glutaminyl-tRNA synthetase 1877 46.59 0 2038094..2038840 - 248 196156702 - MADE_01893 - short chain dehydrogenase 1878 48.54 +1 2039218..2041788 + 856 196156703 - MADE_01894 - hypothetical protein 1879 46.28 0 2042041..2044566 + 841 196156704 - MADE_01895 - penicillin acylase-like protein 1880 41.64 0 2044685..2045707 + 340 196156705 - MADE_01896 - protease (may metabolize cleaved signal peptides) 1881 44.71 0 2045819..2046442 + 207 196156706 - MADE_01897 - transcriptional regulator, TetR family protein 1882 42.22 0 2046542..2046856 - 104 196156707 - MADE_01898 - hypothetical protein 1883 44.49 0 2047103..2047864 + 253 196156708 - MADE_01899 - NIF3 1884 42.47 0 2047880..2048623 + 247 196156709 - MADE_01900 - SAM-dependent methyltransferase 1885 43.66 0 2048620..2049645 - 341 196156710 - MADE_01901 - D-lactate dehydrogenase 1886 42.57 0 2049701..2050198 - 165 196156711 - MADE_01902 - probable glutathione peroxidase 1887 47.95 0 2050280..2051155 + 291 196156712 - MADE_01903 - putative oxidoreductase 1888 43.32 0 2051251..2052852 - 533 196156713 - MADE_01904 - CheY-like receiver protein 1889 45.73 0 2053053..2054246 + 397 196156714 - MADE_01905 - Acyl-CoA dehydrogenase family protein 1890 46.86 0 2054331..2055461 + 376 196156715 - MADE_01906 - Enoyl-CoA hydratase/isomerase family protein 1891 45.13 0 2055656..2056528 + 290 196156716 - MADE_01907 - rRNA (guanine-N1-)-methyltransferase 1892 42.59 0 2056891..2057106 + 71 196156717 - MADE_01908 - Histidinol-phosphate phosphatase 1893 44.92 0 2057221..2058747 - 508 196156718 - MADE_01909 - Membrane-associated hydrolase of alkaline phosphatase superfamily protein 1894 44.29 0 2058756..2058974 - 72 196156719 - MADE_01910 - hypothetical protein 1895 42.64 0 2059134..2060240 + 368 196156720 - MADE_01911 - nucleoid-associated protein NdpA 1896 43.38 0 2060386..2061231 + 281 196156721 - MADE_01912 - hypothetical protein 1897 46.51 0 2061273..2062190 + 305 196156722 - MADE_01913 - metalloendopeptidase-like membrane protein 1898 44.89 0 2062271..2064079 - 602 196156723 - MADE_01914 - protease, putative 1899 45.61 0 2064266..2064949 + 227 196156724 - MADE_01915 - hypothetical protein 1900 42.69 0 2065046..2065483 + 145 196156725 - MADE_01916 - putative PRS2 protein 1901 43.30 0 2065633..2066706 + 357 196156726 - MADE_01917 - sensor histidine kinase 1902 44.57 0 2066708..2067535 + 275 196156727 - MADE_01918 - putative response regulator in two-component regulatory system 1903 45.57 0 2067610..2068704 - 364 196156728 - MADE_01919 - 6-phosphofructokinase 1904 41.61 0 2068783..2069664 + 293 196156729 - MADE_01920 - hypothetical protein 1905 44.52 0 2070099..2070554 - 151 196156730 - MADE_01921 - possible thioesterase protein 1906 45.33 0 2070582..2070806 - 74 196156731 - MADE_01922 - transcriptional regulator, MarR family with acetyltransferase activity 1907 45.92 0 2071051..2072154 - 367 196156732 - MADE_01923 - transposase 1908 44.22 0 2072274..2072420 - 48 196156733 - MADE_01924 - transposase 1909 46.55 0 2072871..2073884 - 337 196156734 - MADE_01925 - quinone oxidoreductase 1910 47.72 0 2073901..2074908 - 335 196156735 - MADE_01926 - Zinc-containing alcohol dehydrogenase superfamily protein 1911 47.69 0 2074983..2075741 - 252 196156736 - MADE_01927 - putative oxidoreductase 1912 45.07 0 2075888..2076790 + 300 196156737 - MADE_01928 - transcriptional regulator, LysR family protein 1913 36.43 -2 2077852..2078271 - 139 196156738 - MADE_01929 - hypothetical protein 1914 38.62 -1 2078437..2079060 - 207 196156739 - MADE_01930 - possible peptidase 1915 45.99 0 2079643..2081127 + 494 196156740 - MADE_01931 - probable transposase protein, Y4bF 1916 41.98 0 2081915..2082712 - 265 196156741 - MADE_01932 - putative DNA polymerase related protein 1917 43.40 0 2082729..2083970 - 413 196156742 - MADE_01933 - Radical SAM 1918 38.10 -1 2084107..2084232 + 41 196156743 - MADE_01934 - hypothetical protein 1919 42.60 0 2084291..2085931 - 546 196156744 - MADE_01935 - Response regulator with TPR repeat 1920 46.31 0 2086053..2086607 + 184 196156745 - MADE_01936 - putative fumarate reductase flavoprotein subunit 1921 45.58 0 2086798..2087769 + 323 196156746 - MADE_01937 - predicted sulfurtransferase 1922 41.37 -1 2087822..2088070 + 82 196156747 - MADE_01938 - putative signal transduction protein with EFhand domain 1923 45.70 0 2088312..2089637 - 441 196156748 - MADE_01939 - ATP-dependent RNA helicase, DEAD box family protein 1924 47.55 0 2089847..2090500 - 217 196156749 - MADE_01940 - 3-oxoacid CoA-transferase subunit B family enzyme 1925 46.75 0 2090500..2091207 - 235 196156750 - MADE_01941 - putative succinyl-CoA transferase, alpha subunit 1926 44.68 0 2091351..2092214 + 287 196156751 - MADE_01942 - probable transcriptional regulator 1927 43.03 0 2092285..2093037 - 250 196156752 - MADE_01943 - hypothetical protein 1928 41.70 0 2093139..2093843 - 234 196156753 - MADE_01944 - Signal transduction histidine kinase 1929 41.13 -1 2094053..2095027 + 324 196156754 - MADE_01945 - transcriptional regulator for cysteine regulon 1930 47.16 0 2095111..2096484 - 457 196156755 - MADE_01946 - L-serine dehydratase 1 1931 46.77 0 2096717..2097289 - 190 196156756 - MADE_01947 - NTP pyrophosphohydrolase, NUDIX family protein 1932 45.56 0 2097338..2098768 - 476 196156757 - MADE_01948 - P-aminobenzoate synthetase, component I 1933 47.65 0 2099086..2100615 + 509 196156758 - MADE_01949 - fumarate hydratase, class I 1934 38.10 -1 2100608..2100838 - 76 196156759 - MADE_01950 - hypothetical protein 1935 43.18 0 2100840..2102129 + 429 196156760 - MADE_01951 - RmuC 1936 46.14 0 2102174..2106139 - 1321 196156761 - MADE_01952 - serine protease, subtilase family protein 1937 41.73 0 2106388..2107137 - 249 196156762 - MADE_01953 - ISSod6, transposase 1938 45.54 0 2107556..2108743 + 395 196156763 - MADE_01954 - Alpha keto acid dehydrogenase complex, E1 component, alpha subunit 1939 46.32 0 2108743..2109720 + 325 196156764 - MADE_01955 - 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 1940 44.71 0 2109738..2111399 + 553 196156765 - MADE_01956 - Apha keto acid dehydrogenase complex, E2 component 1941 44.37 0 2111568..2112446 + 292 196156766 - MADE_01957 - hypothetical protein 1942 42.56 0 2112540..2114414 + 624 196156767 - MADE_01958 - Serine/threonine protein kinase 1943 46.14 0 2114407..2115273 + 288 196156768 - MADE_01959 - Acyl-CoA thioesterase II 1944 45.99 0 2115421..2116842 + 473 196156769 - MADE_01960 - amidophosphoribosyltransferase 1945 45.33 0 2116902..2117501 - 199 196156770 - MADE_01961 - hypothetical protein 1946 43.93 0 2117708..2118490 - 260 196156771 - MADE_01962 - tRNA-(MS 2)O6-A-hydroxylase 1947 42.24 0 2118657..2119262 + 201 196156772 - MADE_01963 - hypothetical protein 1948 45.24 0 2119439..2121034 + 531 196156773 - MADE_01964 - serine carboxypeptidase 44.90 MEAN 3.40 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0