version 1.0
Alteromonas macleodii 'Deep ecotype', complete genome - 1..4412282 4072 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1773 49.00 +1 1928201..1929355 + 384 196156598 - MADE_01789 - putative ABC-type transport system, periplasmic component 1774 46.51 0 1929355..1931100 + 581 196156599 - MADE_01790 - putative ABC-type transport system, permease component 1775 48.20 0 1931090..1931728 + 212 196156600 - MADE_01791 - putative ABC transporter ATP-binding protein 1776 46.12 0 1931722..1932378 + 218 196156601 - MADE_01792 - putative CDP-alcohol phosphatidyltransferase 1777 46.49 0 1932572..1933369 + 265 196156602 - MADE_01793 - putative C-5 sterol desaturase 1778 37.63 -2 1933343..1933435 - 30 196156603 - MADE_01794 - hypothetical protein 1779 48.81 +1 1933437..1933604 - 55 196156604 - MADE_01795 - endonuclease 1780 46.18 0 1933730..1934305 - 191 196156605 - MADE_01796 - Exopolysaccharide synthesis, ExoD 1781 40.92 -1 1934405..1934773 + 122 196156606 - MADE_01797 - hypothetical protein 1782 46.24 0 1934790..1935161 + 123 196156607 - MADE_01798 - response regulator 1783 46.38 0 1935403..1936161 + 252 196156608 - MADE_01799 - hypothetical protein 1784 44.13 0 1936225..1937067 + 280 196156609 - MADE_01800 - hypothetical protein 1785 45.75 0 1937147..1937605 - 152 196156610 - MADE_01801 - hypothetical protein 1786 41.36 -1 1937762..1937923 + 53 196156611 - MADE_01802 - hypothetical transcriptional regulator, LysR family protein 1787 41.29 -1 1937920..1938447 + 175 196156612 - MADE_01803 - transcriptional regulator, LysR family protein 1788 43.69 0 1938596..1939927 + 443 196156613 - MADE_01804 - hypothetical protein 1789 45.31 0 1940014..1941324 - 436 196156614 - MADE_01805 - hypothetical protein 1790 47.40 0 1941321..1942763 - 480 196156615 - MADE_01806 - Delta 1-pyrroline-5-carboxylate reductase 1791 46.47 0 1942760..1943482 - 240 196156616 - MADE_01807 - ABC transporter, ATP-binding protein 1792 46.84 0 1944449..1945618 + 389 196156617 - MADE_01808 - oxidoreductase, FMN-binding protein 1793 44.79 0 1945721..1946200 - 159 196156618 - MADE_01809 - SsrA-binding protein 1794 43.99 0 1946337..1946777 + 146 196156619 - MADE_01810 - cyclase/dehydrase 1795 46.84 0 1946774..1947121 + 115 196156620 - MADE_01811 - hypothetical protein 1796 47.59 0 1947194..1947670 - 158 196156621 - MADE_01812 - transcriptional regulator, MarR family protein 1797 43.99 0 1947703..1949673 - 656 196156622 - MADE_01813 - Choline-glycine betaine transporter 1798 44.73 0 1950254..1951201 + 315 196156623 - MADE_01814 - MscS Mechanosensitive ion channel 1799 47.03 0 1951248..1951802 - 184 196156624 - MADE_01815 - restriction endonuclease 1800 46.90 0 1952296..1953231 + 311 196156625 - MADE_01816 - polyribonucleotide nucleotidyltransferase 1801 44.63 0 1953245..1954306 + 353 196156626 - MADE_01817 - Polynucleotide phosphorylase 1802 36.84 -2 1954329..1954442 - 37 196156627 - MADE_01818 - hypothetical protein 1803 48.64 +1 1954482..1954775 + 97 196156628 - MADE_01819 - Deoxycytidine triphosphate deaminase 1804 33.33 -2 1955176..1955313 - 45 196156629 - MADE_01820 - hypothetical protein 1805 39.57 -1 1955545..1956762 + 405 196156630 - MADE_01821 - hypothetical protein 1806 36.92 -2 1957196..1957390 + 64 196156631 - MADE_01822 - hypothetical protein 1807 40.80 -1 1957471..1958073 + 200 196156632 - MADE_01823 - Methyltransferase type 11 1808 42.03 0 1958205..1958411 + 68 196156633 - MADE_01824 - hypothetical protein 1809 37.09 -2 1958565..1959230 + 221 196156634 - MADE_01825 - hypothetical protein 1810 42.87 0 1959488..1960525 - 345 196156635 - MADE_01826 - ISCps1, transposase 1811 39.90 -1 1960688..1961068 + 126 196156636 - MADE_01827 - hypothetical protein 1812 44.32 0 1961195..1962295 + 366 196156637 - MADE_01828 - beta-lactamase precursor 1813 41.21 -1 1962323..1962703 + 126 196156638 - MADE_01829 - Glyoxalase/dioxygenase superfamily protein 1814 38.62 -1 1963622..1963867 - 81 196156639 - MADE_01830 - CcdA protein 1815 43.50 0 1964009..1964824 - 271 196156640 - MADE_01831 - hypothetical protein 1816 45.73 0 1964989..1965480 + 163 196156641 - MADE_01832 - transposase IS3/IS911 family protein 1817 47.95 0 1965693..1966520 + 275 196156642 - MADE_01833 - putative transposase 1818 45.73 0 1966868..1967359 + 163 196156643 - MADE_01834 - transposase IS3/IS911 family protein 1819 47.95 0 1967572..1968399 + 275 196156644 - MADE_01835 - putative transposase 1820 35.16 -2 1968436..1968654 + 72 196156645 - MADE_01836 - hypothetical protein 1821 42.19 0 1968709..1969092 + 127 196156646 - MADE_01837 - hypothetical protein 1822 38.10 -1 1969195..1969425 + 76 196156647 - MADE_01838 - hypothetical protein 1823 42.46 0 1969440..1969691 + 83 196156648 - MADE_01839 - hypothetical protein 1824 39.85 -1 1969737..1970273 + 178 196156649 - MADE_01840 - hypothetical protein 1825 44.20 0 1970364..1970639 + 91 196156650 - MADE_01841 - hypothetical protein 1826 35.90 -2 1970736..1970852 + 38 196156651 - MADE_01842 - hypothetical protein 1827 45.83 0 1971008..1971319 + 103 196156652 - MADE_01843 - hypothetical protein 1828 45.78 0 1971449..1971922 - 157 196156653 - MADE_01844 - Cytidine deaminase 1829 46.67 0 1972085..1972894 + 269 196156654 - MADE_01845 - TPR domain protein 1830 47.61 0 1972907..1974496 + 529 196156655 - MADE_01846 - hypothetical protein 1831 44.17 0 1974583..1975320 - 245 196156656 - MADE_01847 - putative sulfate transport protein CysZ 1832 45.93 0 1975551..1979138 + 1195 196156657 - MADE_01848 - Chromosome segregation ATPase, sms 1833 47.40 0 1979159..1980757 + 532 196156658 - MADE_01849 - putative cell division protein ZipA 1834 45.54 0 1981002..1981517 + 171 196156659 - MADE_01850 - NAD-dependent DNA ligase 1835 47.30 0 1981484..1983037 + 517 196156660 - MADE_01851 - DNA ligase, NAD-dependent 1836 44.38 0 1983207..1983731 - 174 196156661 - MADE_01852 - flagellar biosynthesis protein FlhF 1837 44.96 0 1983822..1983950 - 42 196156662 - MADE_01853 - hypothetical protein 1838 45.93 0 1983940..1986543 + 867 196156663 - MADE_01854 - DNA internalization-related competence protein ComEC/Rec2 1839 44.42 0 1986796..1988004 + 402 196156664 - MADE_01855 - ABC-type multidrug transport system, ATPase and permease component 1840 46.15 0 1987992..1988381 + 129 196156665 - MADE_01856 - transport ATP-binding protein MsbA 1841 45.71 0 1988378..1989427 + 349 196156666 - MADE_01857 - tetraacyldisaccharide 4-kinase 1842 40.51 -1 1989417..1989611 + 64 196156667 - MADE_01858 - hypothetical protein 1843 46.18 0 1989665..1990411 + 248 196156668 - MADE_01859 - 3-deoxy-manno-octulosonate cytidylyltransferase 1844 46.52 0 1990559..1991218 + 219 196156669 - MADE_01860 - Short chain dehydrogenase family protein 1845 46.43 0 1991366..1992823 - 485 196156670 - MADE_01861 - MiaB-like tRNA modifying enzyme YliG 1846 43.31 0 1993213..1993683 + 156 196156671 - MADE_01862 - hypothetical protein 1847 41.79 0 1993721..1994134 - 137 196156672 - MADE_01863 - hypothetical protein 1848 41.23 -1 1994223..1994336 + 37 196156673 - MADE_01864 - hypothetical protein 1849 48.52 +1 1994352..1995128 - 258 196156674 - MADE_01865 - HesA/MoeB/ThiF family protein 1850 44.34 0 1995347..1996309 + 320 196156675 - MADE_01866 - predicted glutathione S-transferase 1851 44.79 0 1996346..1997209 + 287 196156676 - MADE_01867 - Pirin-like protein 1852 45.11 0 1997539..1998999 + 486 196156677 - MADE_01868 - phosphomannomutase 1853 42.08 0 1999200..1999622 - 140 196156678 - MADE_01869 - hypothetical protein 1854 47.10 0 1999710..2000987 - 425 196156679 - MADE_01870 - Citrate synthase 1855 46.24 0 2001788..2002066 + 92 196156680 - MADE_01871 - putative succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with sdhD 1856 45.40 0 2002060..2002407 + 115 196156681 - MADE_01872 - putative succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with sdhC 1857 47.77 0 2002409..2004181 + 590 196156682 - MADE_01873 - succinate dehydrogenase catalytic subunit(fumarrate reductase) 1858 45.85 0 2004196..2004906 + 236 196156683 - MADE_01874 - succinate dehydrogenase catalytic subunit 1859 47.30 0 2005081..2007900 + 939 196156684 - MADE_01875 - 2-oxoglutarate decarboxylase 1860 46.23 0 2007910..2009421 + 503 196156685 - MADE_01876 - dihydrolipoyltranssuccinate transferase, component of the 2-oxoglutarate dehydrogenase complex 1861 47.04 0 2009574..2010740 + 388 196156686 - MADE_01877 - succinyl-CoA synthetase subunit beta 1862 46.16 0 2010740..2011612 + 290 196156687 - MADE_01878 - Succinyl-CoA synthetase, alpha subunit 1863 45.83 0 2011941..2014757 + 938 196156688 - MADE_01879 - TonB-dependent receptor 1864 43.98 0 2014886..2016406 + 506 196156689 - MADE_01880 - putative tryptophan halogenase 1865 46.38 0 2016697..2019747 + 1016 196156690 - MADE_01881 - TonB-dependent receptor 1866 47.21 0 2019744..2024162 + 1472 196156691 - MADE_01882 - putative pullulanase 1867 45.25 0 2024338..2025201 + 287 196156692 - MADE_01883 - hypothetical protein 1868 37.40 -2 2025700..2025822 + 40 196156693 - MADE_01884 - hypothetical protein 1869 42.08 0 2025844..2026392 + 182 196156694 - MADE_01885 - putative cold-shock RNA methyltransferase 1870 41.25 -1 2026486..2027382 + 298 196156695 - MADE_01886 - Uvs051 1871 46.17 0 2027565..2029457 + 630 196156696 - MADE_01887 - putative glycosidase 1872 44.03 0 2029653..2031587 + 644 196156697 - MADE_01888 - putative alpha-amylase 44.90 MEAN 3.40 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0