version 1.0
Alteromonas macleodii 'Deep ecotype', complete genome - 1..4412282 4072 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1722 47.92 0 1866058..1866825 + 255 196156547 - MADE_01738 - class II aldolase/adducin-like protein 1723 48.27 0 1866894..1868078 + 394 196156548 - MADE_01739 - mandelate racemase/muconate lactonizing enzyme family protein 1724 47.15 0 1868095..1868970 - 291 196156549 - MADE_01740 - amidohydrolase 2 1725 47.57 0 1868995..1869816 - 273 196156550 - MADE_01741 - oxidoreductase, short-chain dehydrogenase/reductase family protein 1726 47.70 0 1870053..1871813 + 586 196156551 - MADE_01742 - probable acyl-CoA dehydrogenase 1727 48.17 0 1871937..1872455 - 172 196156552 - MADE_01743 - hypothetical protein 1728 43.96 0 1872594..1872866 - 90 196156553 - MADE_01744 - hypothetical protein 1729 46.34 0 1873528..1874826 + 432 196156554 - MADE_01745 - hypothetical protein 1730 43.16 0 1874918..1876372 + 484 196156555 - MADE_01746 - D-mannonate oxidoreductase 1731 47.40 0 1876411..1877391 + 326 196156556 - MADE_01747 - IS5 transposase 1732 43.77 0 1877696..1878088 - 130 196156557 - MADE_01748 - hypothetical protein 1733 45.51 0 1878293..1879195 - 300 196156558 - MADE_01749 - Transcriptional Regulator, LysR family protein 1734 43.94 0 1879416..1879877 + 153 196156559 - MADE_01750 - Acyl dehydratase 1735 44.85 0 1880036..1880200 - 54 196156560 - MADE_01751 - hypothetical protein 1736 42.96 0 1880219..1881205 - 328 196156561 - MADE_01752 - putative mechanosensitive channel protein (MscS family) 1737 47.15 0 1881625..1884330 + 901 196156562 - MADE_01753 - TonB-dependent receptor 1738 39.60 -1 1884521..1884823 + 100 196156563 - MADE_01754 - putative pterin-4-alpha-carbinolamine dehydratase protein 1739 44.27 0 1885532..1888867 + 1111 196156564 - MADE_01755 - putative two-component member protein 1740 43.29 0 1888870..1889883 + 337 196156565 - MADE_01756 - Response regulator CheB (receptor modification enzyme, protein-glutamate methylesterase) 1741 45.64 0 1889921..1890115 + 64 196156566 - MADE_01757 - hypothetical protein 1742 43.78 0 1890153..1890650 + 165 196156567 - MADE_01758 - hypothetical protein 1743 45.62 0 1890696..1892192 + 498 196156568 - MADE_01759 - transcription elongation factor NusA 1744 47.64 0 1892217..1894823 + 868 196156569 - MADE_01760 - translation initiation factor IF-2 1745 42.04 0 1894941..1895342 + 133 196156570 - MADE_01761 - ribosome-binding factor A 1746 46.30 0 1895343..1896314 + 323 196156571 - MADE_01762 - tRNA pseudouridine synthase B 1747 42.89 0 1896509..1897795 + 428 196156572 - MADE_01763 - hypothetical protein 1748 45.56 0 1897907..1898176 + 89 196156573 - MADE_01764 - 30S ribosomal protein S15 1749 45.78 0 1898365..1899111 - 248 196156574 - MADE_01765 - RNA pseudouridine synthase family protein 1750 49.14 +1 1899265..1900074 - 269 196156575 - MADE_01766 - hypothetical protein 1751 44.44 0 1900290..1901846 - 518 196156576 - MADE_01767 - predicted amidohydrolase 1752 44.20 0 1902129..1902800 + 223 196156577 - MADE_01768 - oxidoreductase, 2OG-Fe(II) oxygenase family protein 1753 42.70 0 1903086..1904771 + 561 196156578 - MADE_01769 - response regulator receiver protein 1754 47.07 0 1904900..1907491 - 863 196156579 - MADE_01770 - predicted extracellular nuclease 1755 37.63 -2 1907543..1907728 + 61 196156580 - MADE_01771 - hypothetical protein 1756 46.35 0 1907812..1909140 - 442 196156581 - MADE_01772 - hypothetical protein 1757 32.81 -2 1909157..1909348 - 63 196156582 - MADE_01773 - hypothetical protein 1758 44.68 0 1909446..1910009 + 187 196156583 - MADE_01774 - Peroxiredoxin 1759 44.97 0 1910186..1911775 + 529 196156584 - MADE_01775 - probable alkyl hydroperoxide reductase subunit F 1760 46.30 0 1911993..1912640 + 215 196156585 - MADE_01776 - hypothetical protein 1761 45.45 0 1912650..1914143 + 497 196156586 - MADE_01777 - Aspartate kinase 1762 51.28 +1 1914106..1914222 - 38 196156587 - MADE_01778 - hypothetical protein 1763 43.52 0 1914467..1915045 - 192 196156588 - MADE_01779 - Coq7 family protein 1764 47.36 0 1915197..1916351 + 384 196156589 - MADE_01780 - hypothetical protein 1765 47.78 0 1916658..1918325 + 555 196156590 - MADE_01781 - peptidase S41 1766 48.15 0 1918325..1918729 + 134 196156591 - MADE_01782 - putative orphan protein; putative signal peptide 1767 49.66 +1 1918803..1921178 - 791 196156592 - MADE_01783 - hypothetical protein 1768 43.35 0 1921412..1921960 + 182 196156593 - MADE_01784 - hypothetical protein 1769 43.80 0 1922046..1922456 - 136 196156594 - MADE_01785 - hypothetical protein 1770 48.08 0 1922623..1924962 + 779 196156595 - MADE_01786 - putative TonB dependent receptor 1771 46.61 0 1924979..1927132 + 717 196156596 - MADE_01787 - mercuric reductase (Hg(II) reductase) 1772 42.18 0 1927162..1928043 + 293 196156597 - MADE_01788 - hypothetical protein 1773 49.00 +1 1928201..1929355 + 384 196156598 - MADE_01789 - putative ABC-type transport system, periplasmic component 1774 46.51 0 1929355..1931100 + 581 196156599 - MADE_01790 - putative ABC-type transport system, permease component 1775 48.20 0 1931090..1931728 + 212 196156600 - MADE_01791 - putative ABC transporter ATP-binding protein 1776 46.12 0 1931722..1932378 + 218 196156601 - MADE_01792 - putative CDP-alcohol phosphatidyltransferase 1777 46.49 0 1932572..1933369 + 265 196156602 - MADE_01793 - putative C-5 sterol desaturase 1778 37.63 -2 1933343..1933435 - 30 196156603 - MADE_01794 - hypothetical protein 1779 48.81 +1 1933437..1933604 - 55 196156604 - MADE_01795 - endonuclease 1780 46.18 0 1933730..1934305 - 191 196156605 - MADE_01796 - Exopolysaccharide synthesis, ExoD 1781 40.92 -1 1934405..1934773 + 122 196156606 - MADE_01797 - hypothetical protein 1782 46.24 0 1934790..1935161 + 123 196156607 - MADE_01798 - response regulator 1783 46.38 0 1935403..1936161 + 252 196156608 - MADE_01799 - hypothetical protein 1784 44.13 0 1936225..1937067 + 280 196156609 - MADE_01800 - hypothetical protein 1785 45.75 0 1937147..1937605 - 152 196156610 - MADE_01801 - hypothetical protein 1786 41.36 -1 1937762..1937923 + 53 196156611 - MADE_01802 - hypothetical transcriptional regulator, LysR family protein 1787 41.29 -1 1937920..1938447 + 175 196156612 - MADE_01803 - transcriptional regulator, LysR family protein 1788 43.69 0 1938596..1939927 + 443 196156613 - MADE_01804 - hypothetical protein 1789 45.31 0 1940014..1941324 - 436 196156614 - MADE_01805 - hypothetical protein 1790 47.40 0 1941321..1942763 - 480 196156615 - MADE_01806 - Delta 1-pyrroline-5-carboxylate reductase 1791 46.47 0 1942760..1943482 - 240 196156616 - MADE_01807 - ABC transporter, ATP-binding protein 1792 46.84 0 1944449..1945618 + 389 196156617 - MADE_01808 - oxidoreductase, FMN-binding protein 1793 44.79 0 1945721..1946200 - 159 196156618 - MADE_01809 - SsrA-binding protein 1794 43.99 0 1946337..1946777 + 146 196156619 - MADE_01810 - cyclase/dehydrase 1795 46.84 0 1946774..1947121 + 115 196156620 - MADE_01811 - hypothetical protein 1796 47.59 0 1947194..1947670 - 158 196156621 - MADE_01812 - transcriptional regulator, MarR family protein 1797 43.99 0 1947703..1949673 - 656 196156622 - MADE_01813 - Choline-glycine betaine transporter 1798 44.73 0 1950254..1951201 + 315 196156623 - MADE_01814 - MscS Mechanosensitive ion channel 1799 47.03 0 1951248..1951802 - 184 196156624 - MADE_01815 - restriction endonuclease 1800 46.90 0 1952296..1953231 + 311 196156625 - MADE_01816 - polyribonucleotide nucleotidyltransferase 1801 44.63 0 1953245..1954306 + 353 196156626 - MADE_01817 - Polynucleotide phosphorylase 1802 36.84 -2 1954329..1954442 - 37 196156627 - MADE_01818 - hypothetical protein 1803 48.64 +1 1954482..1954775 + 97 196156628 - MADE_01819 - Deoxycytidine triphosphate deaminase 1804 33.33 -2 1955176..1955313 - 45 196156629 - MADE_01820 - hypothetical protein 1805 39.57 -1 1955545..1956762 + 405 196156630 - MADE_01821 - hypothetical protein 1806 36.92 -2 1957196..1957390 + 64 196156631 - MADE_01822 - hypothetical protein 1807 40.80 -1 1957471..1958073 + 200 196156632 - MADE_01823 - Methyltransferase type 11 1808 42.03 0 1958205..1958411 + 68 196156633 - MADE_01824 - hypothetical protein 1809 37.09 -2 1958565..1959230 + 221 196156634 - MADE_01825 - hypothetical protein 1810 42.87 0 1959488..1960525 - 345 196156635 - MADE_01826 - ISCps1, transposase 1811 39.90 -1 1960688..1961068 + 126 196156636 - MADE_01827 - hypothetical protein 1812 44.32 0 1961195..1962295 + 366 196156637 - MADE_01828 - beta-lactamase precursor 1813 41.21 -1 1962323..1962703 + 126 196156638 - MADE_01829 - Glyoxalase/dioxygenase superfamily protein 1814 38.62 -1 1963622..1963867 - 81 196156639 - MADE_01830 - CcdA protein 1815 43.50 0 1964009..1964824 - 271 196156640 - MADE_01831 - hypothetical protein 1816 45.73 0 1964989..1965480 + 163 196156641 - MADE_01832 - transposase IS3/IS911 family protein 1817 47.95 0 1965693..1966520 + 275 196156642 - MADE_01833 - putative transposase 1818 45.73 0 1966868..1967359 + 163 196156643 - MADE_01834 - transposase IS3/IS911 family protein 1819 47.95 0 1967572..1968399 + 275 196156644 - MADE_01835 - putative transposase 1820 35.16 -2 1968436..1968654 + 72 196156645 - MADE_01836 - hypothetical protein 1821 42.19 0 1968709..1969092 + 127 196156646 - MADE_01837 - hypothetical protein 44.90 MEAN 3.40 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0