version 1.0
Alteromonas macleodii 'Deep ecotype', complete genome - 1..4412282 4072 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1666 45.16 0 1803313..1804656 + 447 196156491 - MADE_01682 - glutamate dehydrogenase 1667 43.64 0 1804867..1805322 + 151 196156492 - MADE_01683 - hypothetical protein 1668 40.31 -1 1805347..1805475 + 42 196156493 - MADE_01684 - hypothetical protein 1669 42.15 0 1805832..1808021 - 729 196156494 - MADE_01685 - predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 1670 48.55 +1 1808487..1808933 - 148 196156495 - MADE_01686 - protein-export membrane protein secG(General Secretory Pathway) 1671 43.20 0 1808944..1809642 - 232 196156496 - MADE_01687 - triosephosphate isomerase 1672 45.24 0 1809784..1811127 - 447 196156497 - MADE_01688 - PGM/PMM-family protein 1673 43.11 0 1811380..1812177 - 265 196156498 - MADE_01689 - cytochrome c assembly protein 1674 48.23 0 1812419..1813855 + 478 196156499 - MADE_01690 - signal recognition particle protein 1675 48.58 +1 1814026..1816104 + 692 196156500 - MADE_01691 - putative serine rich repeat containing protein 1676 45.96 0 1816258..1816455 - 65 196156501 - MADE_01692 - hypothetical protein 1677 41.31 -1 1816510..1816722 - 70 196156502 - MADE_01693 - hypothetical protein 1678 46.75 0 1817085..1820795 + 1236 196156503 - MADE_01694 - hypothetical protein 1679 47.01 0 1820792..1821427 + 211 196156504 - MADE_01695 - hypothetical protein 1680 46.39 0 1821424..1822641 + 405 196156505 - MADE_01696 - hypothetical protein 1681 42.51 0 1823048..1823374 + 108 196156506 - MADE_01697 - hypothetical protein 1682 45.95 0 1823408..1824643 + 411 196156507 - MADE_01698 - lipoprotein, putative 1683 48.89 +1 1824751..1827867 - 1038 196156508 - MADE_01699 - RND family efflux transporter 1684 49.14 +1 1827869..1828855 - 328 196156509 - MADE_01700 - RND family efflux system membrane fusion protein 1685 45.53 0 1829061..1830938 - 625 196156510 - MADE_01701 - ABC transporter, ATP-binding/permease protein, putative 1686 41.78 0 1831064..1831276 + 70 196156511 - MADE_01702 - hypothetical protein 1687 46.95 0 1831302..1831727 - 141 196156512 - MADE_01703 - hypothetical protein 1688 38.60 -1 1831729..1831842 + 37 196156513 - MADE_01704 - hypothetical protein 1689 47.62 0 1832185..1832436 + 83 196156514 - MADE_01705 - 30S ribosomal protein S16 1690 44.64 0 1832460..1832981 + 173 196156515 - MADE_01706 - 16S rRNA-processing protein 1691 49.21 +1 1832982..1833743 + 253 196156516 - MADE_01707 - tRNA (guanine-N(1)-)-methyltransferase 1692 45.18 0 1833759..1834121 + 120 196156517 - MADE_01708 - 50S ribosomal subunit protein L19 1693 44.09 0 1834251..1834901 + 216 196156518 - MADE_01709 - hypothetical protein 1694 42.12 0 1834974..1835690 - 238 196156519 - MADE_01710 - putative enoyl-CoA hydratase 1695 44.90 0 1836062..1837150 + 362 196156520 - MADE_01711 - 3-deoxy-7-phosphoheptulonate synthase 1696 47.97 0 1837193..1838347 + 384 196156521 - MADE_01712 - bifunctional chorismate mutase T/prephenate dehydrogenase 1697 45.69 0 1838408..1839589 - 393 196156522 - MADE_01713 - chorismate mutase/prephenate dehydratase 1698 44.60 0 1839901..1840530 - 209 196156523 - MADE_01714 - chemotaxis protein CheY/response regulator receiver domain protein 1699 43.84 0 1840762..1841094 - 110 196156524 - MADE_01715 - Sui1 family protein 1700 38.24 -1 1841266..1841571 + 101 196156525 - MADE_01716 - putative anti-sigma factor antagonist 1701 44.35 0 1841558..1843264 + 568 196156526 - MADE_01717 - putative response regulator 1702 42.52 0 1843486..1843866 + 126 196156527 - MADE_01718 - hypothetical protein 1703 43.37 0 1844092..1846113 + 673 196156528 - MADE_01719 - diguanylate cyclase/phosphodiesterase 1704 45.88 0 1846419..1846697 + 92 196156529 - MADE_01720 - calcium-binding EF-hand protein 1705 44.18 0 1846748..1848157 + 469 196156530 - MADE_01721 - two-component system sensor kinase 1706 44.10 0 1848160..1848744 + 194 196156531 - MADE_01722 - hypothetical protein 1707 47.43 0 1848741..1850081 + 446 196156532 - MADE_01723 - two-component system response regulator 1708 43.17 0 1850243..1850425 + 60 196156533 - MADE_01724 - Flagellin 1709 39.60 -1 1850610..1850912 - 100 196156534 - MADE_01725 - two-component hybrid sensor and regulator 1710 46.16 0 1851171..1852004 - 277 196156535 - MADE_01726 - hypothetical protein 1711 49.06 +1 1852253..1854013 + 586 196156536 - MADE_01727 - aspartyl-tRNA synthetase 1712 45.80 0 1854017..1854457 + 146 196156537 - MADE_01728 - dATP pyrophosphohydrolase 1713 45.80 0 1854457..1854897 + 146 196156538 - MADE_01729 - Holliday junction resolvase 1714 46.24 0 1855084..1856919 + 611 196156539 - MADE_01730 - RNA polymerase sigma factor 1715 46.54 0 1857147..1858766 - 539 196156540 - MADE_01731 - Methyl-accepting chemotaxis protein 1716 45.80 0 1858909..1860063 - 384 196156541 - MADE_01732 - gram negative topoisomerase IV, subunit B 1717 47.79 0 1860124..1860531 - 135 196156542 - MADE_01733 - ABC-type phosphate transport system, periplasmic component 1718 38.69 -1 1860528..1860695 - 55 196156543 - MADE_01734 - hypothetical protein 1719 46.59 0 1861027..1864134 - 1035 196156544 - MADE_01735 - RND family efflux transporter 1720 48.48 +1 1864146..1865195 - 349 196156545 - MADE_01736 - HlyD family secretion protein 1721 46.44 0 1865558..1865992 + 144 196156546 - MADE_01737 - MutT/nudix family protein 1722 47.92 0 1866058..1866825 + 255 196156547 - MADE_01738 - class II aldolase/adducin-like protein 1723 48.27 0 1866894..1868078 + 394 196156548 - MADE_01739 - mandelate racemase/muconate lactonizing enzyme family protein 1724 47.15 0 1868095..1868970 - 291 196156549 - MADE_01740 - amidohydrolase 2 1725 47.57 0 1868995..1869816 - 273 196156550 - MADE_01741 - oxidoreductase, short-chain dehydrogenase/reductase family protein 1726 47.70 0 1870053..1871813 + 586 196156551 - MADE_01742 - probable acyl-CoA dehydrogenase 1727 48.17 0 1871937..1872455 - 172 196156552 - MADE_01743 - hypothetical protein 1728 43.96 0 1872594..1872866 - 90 196156553 - MADE_01744 - hypothetical protein 1729 46.34 0 1873528..1874826 + 432 196156554 - MADE_01745 - hypothetical protein 1730 43.16 0 1874918..1876372 + 484 196156555 - MADE_01746 - D-mannonate oxidoreductase 1731 47.40 0 1876411..1877391 + 326 196156556 - MADE_01747 - IS5 transposase 1732 43.77 0 1877696..1878088 - 130 196156557 - MADE_01748 - hypothetical protein 1733 45.51 0 1878293..1879195 - 300 196156558 - MADE_01749 - Transcriptional Regulator, LysR family protein 1734 43.94 0 1879416..1879877 + 153 196156559 - MADE_01750 - Acyl dehydratase 1735 44.85 0 1880036..1880200 - 54 196156560 - MADE_01751 - hypothetical protein 1736 42.96 0 1880219..1881205 - 328 196156561 - MADE_01752 - putative mechanosensitive channel protein (MscS family) 1737 47.15 0 1881625..1884330 + 901 196156562 - MADE_01753 - TonB-dependent receptor 1738 39.60 -1 1884521..1884823 + 100 196156563 - MADE_01754 - putative pterin-4-alpha-carbinolamine dehydratase protein 1739 44.27 0 1885532..1888867 + 1111 196156564 - MADE_01755 - putative two-component member protein 1740 43.29 0 1888870..1889883 + 337 196156565 - MADE_01756 - Response regulator CheB (receptor modification enzyme, protein-glutamate methylesterase) 1741 45.64 0 1889921..1890115 + 64 196156566 - MADE_01757 - hypothetical protein 1742 43.78 0 1890153..1890650 + 165 196156567 - MADE_01758 - hypothetical protein 1743 45.62 0 1890696..1892192 + 498 196156568 - MADE_01759 - transcription elongation factor NusA 1744 47.64 0 1892217..1894823 + 868 196156569 - MADE_01760 - translation initiation factor IF-2 1745 42.04 0 1894941..1895342 + 133 196156570 - MADE_01761 - ribosome-binding factor A 1746 46.30 0 1895343..1896314 + 323 196156571 - MADE_01762 - tRNA pseudouridine synthase B 1747 42.89 0 1896509..1897795 + 428 196156572 - MADE_01763 - hypothetical protein 1748 45.56 0 1897907..1898176 + 89 196156573 - MADE_01764 - 30S ribosomal protein S15 1749 45.78 0 1898365..1899111 - 248 196156574 - MADE_01765 - RNA pseudouridine synthase family protein 1750 49.14 +1 1899265..1900074 - 269 196156575 - MADE_01766 - hypothetical protein 1751 44.44 0 1900290..1901846 - 518 196156576 - MADE_01767 - predicted amidohydrolase 1752 44.20 0 1902129..1902800 + 223 196156577 - MADE_01768 - oxidoreductase, 2OG-Fe(II) oxygenase family protein 1753 42.70 0 1903086..1904771 + 561 196156578 - MADE_01769 - response regulator receiver protein 1754 47.07 0 1904900..1907491 - 863 196156579 - MADE_01770 - predicted extracellular nuclease 1755 37.63 -2 1907543..1907728 + 61 196156580 - MADE_01771 - hypothetical protein 1756 46.35 0 1907812..1909140 - 442 196156581 - MADE_01772 - hypothetical protein 1757 32.81 -2 1909157..1909348 - 63 196156582 - MADE_01773 - hypothetical protein 1758 44.68 0 1909446..1910009 + 187 196156583 - MADE_01774 - Peroxiredoxin 1759 44.97 0 1910186..1911775 + 529 196156584 - MADE_01775 - probable alkyl hydroperoxide reductase subunit F 1760 46.30 0 1911993..1912640 + 215 196156585 - MADE_01776 - hypothetical protein 1761 45.45 0 1912650..1914143 + 497 196156586 - MADE_01777 - Aspartate kinase 1762 51.28 +1 1914106..1914222 - 38 196156587 - MADE_01778 - hypothetical protein 1763 43.52 0 1914467..1915045 - 192 196156588 - MADE_01779 - Coq7 family protein 1764 47.36 0 1915197..1916351 + 384 196156589 - MADE_01780 - hypothetical protein 1765 47.78 0 1916658..1918325 + 555 196156590 - MADE_01781 - peptidase S41 44.90 MEAN 3.40 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0