version 1.0
Alteromonas macleodii 'Deep ecotype', complete genome - 1..4412282 4072 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1521 46.19 0 1648990..1650132 + 380 196156346 - MADE_01535 - hypothetical protein 1522 47.65 0 1650135..1651091 + 318 196156347 - MADE_01536 - ABC-type hemin transport system, periplasmic component 1523 49.78 +1 1651091..1652227 + 378 196156348 - MADE_01537 - ABC-type hemin transport system, pemease component 1524 45.25 0 1652233..1653063 + 276 196156349 - MADE_01538 - ABC-type hemin transport system, ATPase component 1525 45.22 0 1653101..1653832 + 243 196156350 - MADE_01539 - uncharacterized metal-binding protein 1526 44.11 0 1653807..1654103 - 98 196156351 - MADE_01540 - hypothetical protein 1527 38.44 -1 1654111..1654404 + 97 196156352 - MADE_01541 - Stress responsive alpha-beta barrel 1528 42.33 0 1654478..1655188 + 236 196156353 - MADE_01542 - hypothetical protein 1529 43.81 0 1655282..1655701 + 139 196156354 - MADE_01543 - probable RTX (repeat in structural toxin) 1530 44.18 0 1655807..1656313 + 168 196156355 - MADE_01544 - hypothetical protein 1531 44.80 0 1656384..1657421 + 345 196156356 - MADE_01545 - ISCps1, transposase 1532 44.24 0 1657605..1659548 + 647 196156357 - MADE_01546 - hypothetical protein 1533 44.61 0 1662355..1663347 + 330 196156358 - MADE_01549 - cytochrome-c peroxidase 1534 46.23 0 1663599..1665413 + 604 196156359 - MADE_01550 - hypothetical protein 1535 47.46 0 1665410..1666237 - 275 196156360 - MADE_01551 - integrase 1536 44.90 0 1666285..1666578 - 97 196156361 - MADE_01552 - transposase, IS911 1537 41.57 0 1666723..1667220 + 165 196156362 - MADE_01553 - hypothetical protein 1538 45.25 0 1667486..1669357 + 623 196156363 - MADE_01554 - 1,4-alpha-glucan branching enzyme 1539 43.21 0 1669535..1670425 - 296 196156364 - MADE_01555 - transport protein 1540 39.84 -1 1670452..1670697 - 81 196156365 - MADE_01556 - hypothetical protein 1541 47.38 0 1670995..1672083 + 362 196156366 - MADE_01557 - glucose-fructose oxidoreductase 1542 42.55 0 1672065..1672205 - 46 196156367 - MADE_01558 - hypothetical protein 1543 46.46 0 1672198..1673271 - 357 196156368 - MADE_01559 - hypothetical protein 1544 44.36 0 1673362..1674150 - 262 196156369 - MADE_01560 - lipase-related protein 1545 47.34 0 1674347..1674703 - 118 196156370 - MADE_01561 - translation initiation inhibitor 1546 41.24 -1 1674974..1675150 + 58 196156371 - MADE_01562 - Prevent-host-death protein 1547 38.01 -2 1675164..1675484 + 106 196156372 - MADE_01563 - hypothetical protein 1548 40.23 -1 1675944..1676204 + 86 196156373 - MADE_01564 - predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain 1549 44.22 0 1676191..1676484 + 97 196156374 - MADE_01565 - Plasmid stabilization system A 1550 43.44 0 1677013..1678110 - 365 196156375 - MADE_01566 - hypothetical protein 1551 45.82 0 1678139..1679203 - 354 196156376 - MADE_01567 - putative orphan protein; putative signal peptide 1552 47.26 0 1679300..1679773 - 157 196156377 - MADE_01568 - putative unknown lipoprotein 1553 47.58 0 1679878..1681470 - 530 196156378 - MADE_01569 - hypothetical protein 1554 47.62 0 1681632..1682366 - 244 196156379 - MADE_01570 - hypothetical protein 1555 46.25 0 1682363..1682896 - 177 196156380 - MADE_01571 - putative RNA polymerase sigma factor (ECF family) protein 1556 47.50 0 1683066..1685126 - 686 196156381 - MADE_01572 - TonB-dependent receptor, putative 1557 47.07 0 1685469..1685912 + 147 196156382 - MADE_01573 - RDD domain containing protein 1558 48.12 0 1686023..1687084 - 353 196156383 - MADE_01574 - predicted permease 1559 49.41 +1 1687085..1688185 - 366 196156384 - MADE_01575 - permease YjgP/YjgQ 1560 50.45 +1 1688413..1689954 + 513 196156385 - MADE_01576 - leucyl aminopeptidase 1561 50.35 +1 1689961..1690383 + 140 196156386 - MADE_01577 - DNA polymerase III chi subunit 1562 49.26 +1 1690419..1693193 + 924 196156387 - MADE_01578 - valyl-tRNA synthetase 1563 43.80 0 1693338..1696013 - 891 196156388 - MADE_01579 - Response regulator receiver:ATP-binding region, ATPase-like protein 1564 46.88 0 1696064..1697347 - 427 196156389 - MADE_01580 - signal peptide prediction 1565 43.46 0 1697534..1698382 + 282 196156390 - MADE_01581 - SPFH domain/Band 7 family protein 1566 46.45 0 1698390..1698671 + 93 196156391 - MADE_01582 - hypothetical protein 1567 41.84 0 1698776..1700209 - 477 196156392 - MADE_01583 - Response regulator containing a CheY-like receiver domain and a GGDEF domain 1568 44.53 0 1700384..1701196 - 270 196156393 - MADE_01584 - hypothetical protein 1569 47.37 0 1701310..1701708 - 132 196156394 - MADE_01585 - hypothetical protein 1570 40.66 -1 1701741..1702409 - 222 196156395 - MADE_01586 - 1-acyl-sn-glycerol-3-phosphate acyltransferase 1571 45.26 0 1702672..1703811 + 379 196156396 - MADE_01587 - HD-GYP domain protein 1572 50.47 +1 1703902..1705296 - 464 196156397 - MADE_01588 - two-component system, response regulator 1573 42.91 0 1705301..1706386 - 361 196156398 - MADE_01589 - nitrogen regulation protein NR(II) 1574 45.77 0 1706518..1707144 - 208 196156399 - MADE_01590 - hypothetical protein 1575 46.74 0 1707428..1708837 - 469 196156400 - MADE_01591 - glutamine synthetase 1576 46.37 0 1709296..1711128 + 610 196156401 - MADE_01592 - BipA protein 1577 41.80 0 1711366..1711743 + 125 196156402 - MADE_01593 - rteB, two-component system response regulator 1578 47.11 0 1711885..1713060 + 391 196156403 - MADE_01594 - Aminotransferase, class I and II 1579 47.87 0 1713244..1714440 - 398 196156404 - MADE_01595 - putative manganese/divalent cation transport protein (NRAMP family) 1580 44.87 0 1714681..1715382 + 233 196156405 - MADE_01596 - yecA family protein 1581 45.50 0 1715422..1715610 - 62 196156406 - MADE_01597 - hypothetical protein 1582 41.96 0 1715793..1716221 - 142 196156407 - MADE_01598 - hypothetical protein 1583 46.44 0 1716223..1717839 - 538 196156408 - MADE_01599 - putative Voltage-gated ClC-type chloride channel clcA 1584 42.35 0 1717982..1718713 + 243 196156409 - MADE_01600 - hypothetical protein 1585 43.33 0 1718827..1719276 - 149 196156410 - MADE_01601 - azurin precursor 1586 41.13 -1 1719378..1719518 + 46 196156411 - MADE_01602 - hypothetical protein 1587 49.64 +1 1719690..1721063 + 457 196156412 - MADE_01603 - Fumarase 1588 48.45 +1 1721415..1722188 + 257 196156413 - MADE_01604 - septum site-determining protein MinC 1589 46.30 0 1722219..1723028 + 269 196156414 - MADE_01605 - septum site-determining protein MinD 1590 46.74 0 1723028..1723288 + 86 196156415 - MADE_01606 - cell division topological specificity factor MinE 1591 44.52 0 1723349..1724188 - 279 196156416 - MADE_01607 - UDP-galactose-lipid carrier transferase MED92 1592 45.77 0 1724319..1725098 + 259 196156417 - MADE_01608 - hypothetical protein 1593 45.87 0 1725250..1725600 + 116 196156418 - MADE_01609 - HesB protein family 1594 45.55 0 1725749..1726321 + 190 196156419 - MADE_01610 - putative glutathione S-transferase enzyme with thioredoxin-like domain 1595 48.97 +1 1726330..1727301 - 323 196156420 - MADE_01611 - D-isomer specific 2-hydroxyacid dehydrogenase family protein 1596 45.53 0 1727428..1729296 + 622 196156421 - MADE_01612 - homocysteine synthase 1597 43.62 0 1729497..1729943 + 148 196156422 - MADE_01613 - hypothetical protein 1598 49.38 +1 1730047..1731168 - 373 196156423 - MADE_01614 - xenobiotic reductase B 1599 48.30 0 1731439..1732761 - 440 196156424 - MADE_01615 - regulator of pathogenicity factors 1600 46.68 0 1733450..1734595 + 381 196156425 - MADE_01616 - putative fucose permease 1601 48.13 0 1734646..1735848 - 400 196156426 - MADE_01617 - hypothetical protein 1602 45.48 0 1735856..1737181 - 441 196156427 - MADE_01618 - Peptidase, M23/M37 family protein 1603 41.84 0 1737400..1737540 + 46 196156428 - MADE_01619 - hypothetical protein 1604 44.67 0 1737610..1738809 + 399 196156429 - MADE_01620 - tyrosyl-tRNA synthetase 1605 47.90 0 1738989..1740347 - 452 196156430 - MADE_01621 - putative oxidoreductase 1606 47.72 0 1740374..1740943 - 189 196156431 - MADE_01622 - acetyltransferase, GNAT family protein 1607 41.04 -1 1740981..1741382 - 133 196156432 - MADE_01623 - hypothetical protein 1608 45.74 0 1741537..1741947 - 136 196156433 - MADE_01624 - putative phage shock protein E 1609 44.88 0 1742111..1743037 - 308 196156434 - MADE_01625 - ABC transporter, periplasmic substrate-binding protein, putative 1610 48.47 +1 1743113..1744057 - 314 196156435 - MADE_01626 - adenosylcobinamide-phosphate synthase 1611 45.30 0 1744059..1744760 - 233 196156436 - MADE_01627 - 5-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1612 47.79 0 1744925..1745512 - 195 196156437 - MADE_01628 - hypothetical protein 1613 46.03 0 1745724..1746164 - 146 196156438 - MADE_01629 - hypothetical protein 1614 48.16 0 1746359..1747774 - 471 196156439 - MADE_01630 - glutamate synthase, small subunit 1615 48.46 +1 1747788..1752170 - 1460 196156440 - MADE_01631 - glutamate synthase, large subunit 1616 46.10 0 1752929..1753876 + 315 196156441 - MADE_01632 - N-acetylmuramoyl-L-alanine amidase, putative 1617 45.05 0 1753974..1756328 + 784 196156442 - MADE_01633 - signal transduction histidine kinase 1618 41.83 0 1756416..1757015 + 199 196156443 - MADE_01634 - hypothetical protein 1619 45.12 0 1757015..1758643 + 542 196156444 - MADE_01635 - hypothetical protein 1620 44.94 0 1758708..1759913 - 401 196156445 - MADE_01636 - N-acylglucosamine 2-epimerase 44.90 MEAN 3.40 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0