version 1.0
Alteromonas macleodii 'Deep ecotype', complete genome - 1..4412282 4072 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1235 44.97 0 1331589..1332344 - 251 196156060 - MADE_01241 - putative MTA/SAH nucleosidase 1236 47.88 0 1332676..1334112 - 478 196156061 - MADE_01242 - pyruvate kinase II 1237 46.13 0 1334352..1335203 - 283 196156062 - MADE_01243 - transcriptional regulator, RpiR family protein 1238 45.58 0 1335488..1336981 + 497 196156063 - MADE_01244 - glucose-6-phosphate 1-dehydrogenase 1239 45.60 0 1336983..1337675 + 230 196156064 - MADE_01245 - 6-phosphogluconolactonase 1240 48.66 +1 1337685..1339511 + 608 196156065 - MADE_01246 - 6-phosphogluconate dehydratase 1241 46.65 0 1339511..1340464 + 317 196156066 - MADE_01247 - glucokinase 1242 47.91 0 1340468..1341112 + 214 196156067 - MADE_01248 - keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 1243 46.95 0 1341257..1342108 - 283 196156068 - MADE_01249 - uncharacterized aldose 1-epimerase-like protein 1244 46.49 0 1342332..1343327 - 331 196156069 - MADE_01250 - glyceraldehyde-3-phosphate dehydrogenase 1245 45.29 0 1343564..1345762 + 732 196156070 - MADE_01251 - putative 4-alpha-glucanotransferase 1246 47.38 0 1345925..1348117 + 730 196156071 - MADE_01252 - glycogen branching enzyme 1247 46.93 0 1348147..1350234 + 695 196156072 - MADE_01253 - glycogen debranching enzyme GlgX 1248 37.98 -2 1350292..1350420 + 42 196156073 - MADE_01254 - hypothetical protein 1249 47.75 0 1350554..1352107 + 517 196156074 - MADE_01255 - 6-phosphogluconate dehydrogenase 1250 45.45 0 1352224..1352652 + 142 196156075 - MADE_01256 - methionine sulfoxide reductase B 1251 44.72 0 1352815..1353675 - 286 196156076 - MADE_01257 - hypothetical protein 1252 47.93 0 1353893..1355338 + 481 196156077 - MADE_01258 - glyceraldehyde-3-phosphate dehydrogenase 1253 44.21 0 1355545..1356684 + 379 196156078 - MADE_01259 - predicted carboxypeptidase, Zn dependent 1254 48.22 0 1356824..1358455 + 543 196156079 - MADE_01260 - Na(+)-linked D-alanine glycine permease 1255 41.38 -1 1358515..1358688 - 57 196156080 - MADE_01261 - hypothetical protein 1256 48.41 +1 1358917..1359042 + 41 196156081 - MADE_01262 - hypothetical protein 1257 42.18 0 1359043..1359336 + 97 196156082 - MADE_01263 - hypothetical protein 1258 46.82 0 1359326..1362232 + 968 196156083 - MADE_01264 - hypothetical protein 1259 43.84 0 1362233..1362451 + 72 196156084 - MADE_01265 - putative orphan protein 1260 44.10 0 1362518..1362712 - 64 196156085 - MADE_01266 - hypothetical protein 1261 43.50 0 1362751..1362927 - 58 196156086 - MADE_01267 - hypothetical protein 1262 46.48 0 1363184..1363837 + 217 196156087 - MADE_01268 - hypothetical protein 1263 43.23 0 1363873..1364448 - 191 196156088 - MADE_01269 - hypothetical protein 1264 45.30 0 1364475..1364708 - 77 196156089 - MADE_01270 - hypothetical protein 1265 42.50 0 1364792..1365304 - 170 196156090 - MADE_01271 - hypothetical protein 1266 46.67 0 1365308..1365637 - 109 196156091 - MADE_01272 - hypothetical protein 1267 44.52 0 1365826..1367934 - 702 196156092 - MADE_01273 - putative two-component sensor histidine kinase and response regulator hybrid 1268 44.59 0 1367947..1368399 - 150 196156093 - MADE_01274 - putative two-component response regulator 1269 42.00 0 1368389..1369900 - 503 196156094 - MADE_01275 - putative two-component sensor histidine kinase 1270 44.89 0 1369905..1370129 - 74 196156095 - MADE_01276 - putative orphan protein 1271 44.37 0 1370149..1371480 - 443 196156096 - MADE_01277 - putative sigma-54 interacting response regulator protein 1272 49.40 +1 1371995..1372573 + 192 196156097 - MADE_01278 - probable exopolysaccharide synthesis protein 1273 45.35 0 1372596..1373519 - 307 196156098 - MADE_01279 - putative transcriptional regulator with periplasmic binding protein domain (LysR family) 1274 45.48 0 1373571..1373924 - 117 196156099 - MADE_01280 - hypothetical protein 1275 43.18 0 1374170..1374433 + 87 196156100 - MADE_01281 - transcriptional regulator, ArsR family protein 1276 44.27 0 1374520..1375269 - 249 196156101 - MADE_01282 - hypothetical protein 1277 47.92 0 1375465..1376712 - 415 196156102 - MADE_01283 - transposase 1278 44.94 0 1376736..1377071 - 111 196156103 - MADE_01284 - Transposase and inactivated derivative 1279 47.72 0 1377071..1377355 - 94 196156104 - MADE_01285 - hypothetical protein 1280 39.71 -1 1377394..1378428 - 344 196156105 - MADE_01286 - putative lipopolysaccharide modification acyltransferase 1281 51.13 +1 1378476..1379885 - 469 196156106 - MADE_01287 - hypothetical transposase 1282 39.34 -1 1380310..1381857 + 515 196156107 - MADE_01288 - hypothetical protein 1283 38.44 -1 1381915..1382502 + 195 196156108 - MADE_01289 - glycosyl transferase family protein 1284 37.11 -2 1382561..1382719 + 52 196156109 - MADE_01290 - glycosyl transferase 1285 34.11 -2 1382961..1383089 - 42 196156110 - MADE_01291 - hypothetical protein 1286 32.24 -2 1383124..1383306 + 60 196156111 - MADE_01292 - hypothetical protein 1287 38.99 -1 1383296..1384903 + 535 196156112 - MADE_01293 - hypothetical protein 1288 37.84 -2 1384998..1386239 + 413 196156113 - MADE_01294 - hypothetical protein 1289 39.29 -1 1386425..1387582 + 385 196156114 - MADE_01295 - secreted polysaccharide polymerase 1290 39.53 -1 1387744..1388808 + 354 196156115 - MADE_01296 - glycosyltransferase 1291 41.25 -1 1388805..1390256 + 483 196156116 - MADE_01297 - Polysaccharide biosynthesis protein 1292 40.52 -1 1390259..1391344 + 361 196156117 - MADE_01298 - predicted glycosyltransferase 1293 39.18 -1 1391313..1392440 - 375 196156118 - MADE_01299 - putative glycosyltransferase 1294 36.78 -2 1392448..1393752 - 434 196156119 - MADE_01300 - hypothetical protein 1295 37.79 -2 1393752..1394783 - 343 196156120 - MADE_01301 - hypothetical protein 1296 39.91 -1 1394780..1395859 - 359 196156121 - MADE_01302 - glycosyl transferase, group 1 family protein 1297 42.55 0 1395883..1397781 - 632 196156122 - MADE_01303 - Asparagine synthase, glutamine-hydrolyzing 1298 43.20 0 1397794..1398867 - 357 196156123 - MADE_01304 - hypothetical protein 1299 43.31 0 1398882..1399883 - 333 196156124 - MADE_01305 - WalW protein 1300 43.05 0 1399887..1400987 - 366 196156125 - MADE_01306 - Glycosyl transferase, group 1 1301 43.02 0 1400993..1401973 - 326 196156126 - MADE_01307 - dolichyl-phosphate mannose synthase related protein 1302 41.56 0 1401955..1404459 - 834 196156127 - MADE_01308 - hypothetical protein 1303 37.13 -2 1404456..1405562 - 368 196156128 - MADE_01309 - hypothetical protein 1304 38.96 -1 1405908..1408589 + 893 196156129 - MADE_01310 - TPR domain protein 1305 43.13 0 1408730..1409566 + 278 196156130 - MADE_01311 - hypothetical protein 1306 43.42 0 1410072..1410299 + 75 196156131 - MADE_01312 - putative orphan protein; putative transposase (IS66 family element,Orf2-like) 1307 46.44 0 1410376..1410642 + 88 196156132 - MADE_01313 - putative transposase (IS66) 1308 38.19 -1 1410809..1411672 - 287 196156133 - MADE_01314 - hypothetical protein 1309 38.93 -1 1411729..1412478 - 249 196156134 - MADE_01315 - hypothetical protein 1310 46.14 0 1412833..1413675 + 280 196156135 - MADE_01316 - hypothetical protein 1311 36.81 -2 1413798..1413941 + 47 196156136 - MADE_01317 - hypothetical protein 1312 40.20 -1 1414178..1414789 + 203 196156137 - MADE_01318 - HPr kinase 1313 41.16 -1 1414786..1415871 + 361 196156138 - MADE_01319 - hypothetical protein 1314 42.98 0 1415865..1417502 - 545 196156139 - MADE_01320 - FAD-binding protein 1315 44.15 0 1417564..1418580 + 338 196156140 - MADE_01321 - capsular polysaccharide biosynthesis protein I 1316 46.13 0 1418614..1419504 - 296 196156141 - MADE_01322 - Patatin 1317 37.72 -2 1419531..1419644 + 37 196156142 - MADE_01323 - hypothetical protein 1318 47.54 0 1419810..1422005 - 731 196156143 - MADE_01324 - malate synthase 1319 47.51 0 1422104..1423048 - 314 196156144 - MADE_01325 - transcriptional regulator, LysR family protein 1320 46.99 0 1423331..1424926 - 531 196156145 - MADE_01326 - isocitrate lyase 1321 42.60 0 1425286..1426245 + 319 196156146 - MADE_01327 - chemotaxis protein CheV 1322 45.13 0 1426470..1427936 + 488 196156147 - MADE_01328 - alkaline phosphatase 1323 46.25 0 1428085..1429005 + 306 196156148 - MADE_01329 - glutaminase 1324 45.60 0 1429054..1430406 - 450 196156149 - MADE_01330 - predicted secreted hydrolase 1325 46.92 0 1430403..1433192 - 929 196156150 - MADE_01331 - hypothetical protein 1326 45.74 0 1433248..1433940 - 230 196156151 - MADE_01332 - ABC transporter, nucleotide binding/ATPase protein 1327 44.30 0 1434117..1434818 - 233 196156152 - MADE_01333 - Dihydroorotate dehydrogenase 2 1328 47.59 0 1434865..1435404 - 179 196156153 - MADE_01334 - Rhomboid-like protein 1329 47.15 0 1435425..1436582 - 385 196156154 - MADE_01335 - putative glutathionylspermidine synthase 1330 49.03 +1 1436594..1437262 - 222 196156155 - MADE_01336 - predicted integral membrane protein 1331 44.84 0 1437273..1437689 - 138 196156156 - MADE_01337 - hypothetical protein 1332 43.88 0 1437706..1438350 - 214 196156157 - MADE_01338 - hypothetical protein 1333 46.31 0 1438363..1439418 - 351 196156158 - MADE_01339 - Kef-type K+ transport system, predicted NAD-binding component 1334 45.67 0 1439566..1440246 - 226 196156159 - MADE_01340 - Phage shock protein A (IM30), suppresses sigma54-dependent transcription 44.90 MEAN 3.40 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0