version 1.0
Alteromonas macleodii 'Deep ecotype', complete genome - 1..4412282 4072 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1174 43.54 0 1261268..1262335 + 355 196155999 - MADE_01180 - hypothetical protein 1175 45.35 0 1262466..1262981 + 171 196156000 - MADE_01181 - hypothetical oxidoreductase protein 1176 43.35 0 1263053..1264090 + 345 196156001 - MADE_01182 - ISCps1, transposase 1177 46.26 0 1264392..1264979 + 195 196156002 - MADE_01183 - hypothetical oxidoreductase protein 1178 44.44 0 1265047..1265460 - 137 196156003 - MADE_01184 - Transcriptional regulator, MerR family protein 1179 46.30 0 1265552..1266037 + 161 196156004 - MADE_01185 - hypothetical protein 1180 40.18 -1 1266124..1266561 + 145 196156005 - MADE_01186 - CN5-related N-acetyltransferase 1181 37.39 -2 1266609..1266953 + 114 196156006 - MADE_01187 - Lactoylglutathione lyase 2396 1182 46.40 0 1267288..1267953 + 221 196156007 - MADE_01188 - hypothetical protein 1183 48.76 +1 1267958..1268722 + 254 196156008 - MADE_01189 - lipoprotein, putative 1184 47.64 0 1268733..1269473 + 246 196156009 - MADE_01190 - hypothetical protein 1185 48.88 +1 1269582..1271807 - 741 196156010 - MADE_01191 - fused 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase and FAD-dependent demodification enzyme 1186 48.42 +1 1271811..1273016 - 401 196156011 - MADE_01192 - kelch motif domain protein 1187 45.02 0 1273240..1274874 + 544 196156012 - MADE_01193 - acyl-CoA synthase 1188 49.05 +1 1275168..1276382 + 404 196156013 - MADE_01194 - 3-oxoacyl-(acyl-carrier-protein) synthase 1189 41.31 -1 1276499..1278178 - 559 196156014 - MADE_01195 - penicillin-binding protein 1190 38.96 -1 1278704..1278934 + 76 196156015 - MADE_01196 - helix-turn-helix protein, CopG 1191 37.21 -2 1279087..1279215 - 42 196156016 - MADE_01197 - hypothetical protein 1192 47.10 0 1279363..1280052 - 229 196156017 - MADE_01198 - cyclic nucleotide-binding protein 1193 46.30 0 1280229..1280984 + 251 196156018 - MADE_01199 - class II aldolase/adducin-like protein 1194 44.19 0 1281014..1281142 + 42 196156019 - MADE_01200 - hypothetical protein 1195 46.57 0 1281223..1282431 + 402 196156020 - MADE_01201 - erythronate-4-phosphate dehydrogenase 1196 46.41 0 1282461..1283477 + 338 196156021 - MADE_01202 - Aspartate-semialdehyde dehydrogenase 1197 46.03 0 1283963..1288042 + 1359 196156022 - MADE_01203 - AAA ATPase containing von Willebrand factor type A (vWA) 1198 49.81 +1 1288198..1288992 + 264 196156023 - MADE_01204 - tRNA pseudouridine synthase A 1199 38.13 -1 1289020..1289832 + 270 196156024 - MADE_01205 - ABC-type amino acid transport/signal transduction system, periplasmic component/domain 1200 46.34 0 1290114..1290959 + 281 196156025 - MADE_01206 - acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1201 46.40 0 1290959..1292290 + 443 196156026 - MADE_01207 - bifunctional folylpolyglutamate synthase/dihydrofolate synthase 1202 45.42 0 1292339..1292950 + 203 196156027 - MADE_01208 - dedD protein 1203 46.06 0 1293927..1294523 - 198 196156028 - MADE_01209 - bacteriocin production protein 1204 40.96 -1 1294910..1295761 - 283 196156029 - MADE_01210 - site-specific recombinase, resolvase family protein 1205 37.72 -2 1296202..1297068 - 288 196156030 - MADE_01211 - bacteriocin production protein 1206 43.03 0 1297843..1298853 - 336 196156031 - MADE_01212 - site-specific recombinase, resolvase family protein 1207 41.77 0 1298929..1299165 - 78 196156032 - MADE_01213 - probable epoxide hydrolase 1208 43.83 0 1299288..1300640 - 450 196156033 - MADE_01214 - sensor histidine kinase 1209 45.36 0 1300637..1302166 - 509 196156034 - MADE_01215 - Response regulator 1210 45.98 0 1302490..1303161 + 223 196156035 - MADE_01216 - putative oxidoreductase 1211 44.32 0 1303217..1305109 - 630 196156036 - MADE_01217 - putative diguanylate cyclase/phosphodiesterase domain 2 (EAL) 1212 46.41 0 1305309..1306463 - 384 196156037 - MADE_01218 - Iron-containing alcohol dehydrogenase 1213 45.65 0 1306596..1307504 + 302 196156038 - MADE_01219 - putative LysR-family transcriptional regulator 1214 40.24 -1 1307571..1307990 - 139 196156039 - MADE_01220 - ABC-type phosphate transport system, periplasmic component 1215 42.81 0 1308099..1308383 + 94 196156040 - MADE_01221 - hypothetical protein 1216 46.87 0 1308759..1310501 + 580 196156041 - MADE_01222 - methyl-accepting chemotaxis protein 1217 38.21 -1 1310576..1310698 - 40 196156042 - MADE_01223 - hypothetical protein 1218 47.04 0 1310918..1314958 + 1346 196156043 - MADE_01224 - extracellular ribonuclease/nuclease fusion protein 1219 40.33 -1 1314975..1315574 + 199 196156044 - MADE_01225 - hypothetical protein 1220 45.27 0 1316555..1317442 + 295 196156045 - MADE_01226 - hypothetical protein 1221 42.90 0 1317489..1319588 - 699 196156046 - MADE_01227 - two-component hybrid sensor and regulator 1222 49.81 +1 1320007..1321881 + 624 196156047 - MADE_01228 - putative cell surface protein 1223 45.61 0 1321947..1323689 + 580 196156048 - MADE_01229 - hypothetical protein 1224 42.42 0 1323730..1324323 - 197 196156049 - MADE_01230 - hypothetical protein 1225 42.06 0 1324341..1324970 - 209 196156050 - MADE_01231 - hypothetical protein 1226 42.99 0 1325039..1326022 - 327 196156051 - MADE_01232 - glycosyl transferase, family 2 1227 34.15 -2 1326116..1326238 + 40 196156052 - MADE_01233 - hypothetical protein 1228 46.63 0 1326456..1327004 + 182 196156053 - MADE_01234 - hypothetical protein 1229 41.72 0 1327038..1328015 - 325 196156054 - MADE_01235 - Endonuclease/exonuclease/phosphatase 1230 37.59 -2 1328387..1328527 - 46 196156055 - MADE_01236 - hypothetical protein 1231 42.05 0 1328532..1329059 + 175 196156056 - MADE_01237 - putative hyperosmotically inducible periplasmic protein 1232 41.81 0 1329154..1330746 - 530 196156057 - MADE_01238 - putative alginate lyase 1233 34.19 -2 1330746..1330862 + 38 196156058 - MADE_01239 - hypothetical protein 1234 42.59 0 1331156..1331533 + 125 196156059 - MADE_01240 - hypothetical protein 1235 44.97 0 1331589..1332344 - 251 196156060 - MADE_01241 - putative MTA/SAH nucleosidase 1236 47.88 0 1332676..1334112 - 478 196156061 - MADE_01242 - pyruvate kinase II 1237 46.13 0 1334352..1335203 - 283 196156062 - MADE_01243 - transcriptional regulator, RpiR family protein 1238 45.58 0 1335488..1336981 + 497 196156063 - MADE_01244 - glucose-6-phosphate 1-dehydrogenase 1239 45.60 0 1336983..1337675 + 230 196156064 - MADE_01245 - 6-phosphogluconolactonase 1240 48.66 +1 1337685..1339511 + 608 196156065 - MADE_01246 - 6-phosphogluconate dehydratase 1241 46.65 0 1339511..1340464 + 317 196156066 - MADE_01247 - glucokinase 1242 47.91 0 1340468..1341112 + 214 196156067 - MADE_01248 - keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 1243 46.95 0 1341257..1342108 - 283 196156068 - MADE_01249 - uncharacterized aldose 1-epimerase-like protein 1244 46.49 0 1342332..1343327 - 331 196156069 - MADE_01250 - glyceraldehyde-3-phosphate dehydrogenase 1245 45.29 0 1343564..1345762 + 732 196156070 - MADE_01251 - putative 4-alpha-glucanotransferase 1246 47.38 0 1345925..1348117 + 730 196156071 - MADE_01252 - glycogen branching enzyme 1247 46.93 0 1348147..1350234 + 695 196156072 - MADE_01253 - glycogen debranching enzyme GlgX 1248 37.98 -2 1350292..1350420 + 42 196156073 - MADE_01254 - hypothetical protein 1249 47.75 0 1350554..1352107 + 517 196156074 - MADE_01255 - 6-phosphogluconate dehydrogenase 1250 45.45 0 1352224..1352652 + 142 196156075 - MADE_01256 - methionine sulfoxide reductase B 1251 44.72 0 1352815..1353675 - 286 196156076 - MADE_01257 - hypothetical protein 1252 47.93 0 1353893..1355338 + 481 196156077 - MADE_01258 - glyceraldehyde-3-phosphate dehydrogenase 1253 44.21 0 1355545..1356684 + 379 196156078 - MADE_01259 - predicted carboxypeptidase, Zn dependent 1254 48.22 0 1356824..1358455 + 543 196156079 - MADE_01260 - Na(+)-linked D-alanine glycine permease 1255 41.38 -1 1358515..1358688 - 57 196156080 - MADE_01261 - hypothetical protein 1256 48.41 +1 1358917..1359042 + 41 196156081 - MADE_01262 - hypothetical protein 1257 42.18 0 1359043..1359336 + 97 196156082 - MADE_01263 - hypothetical protein 1258 46.82 0 1359326..1362232 + 968 196156083 - MADE_01264 - hypothetical protein 1259 43.84 0 1362233..1362451 + 72 196156084 - MADE_01265 - putative orphan protein 1260 44.10 0 1362518..1362712 - 64 196156085 - MADE_01266 - hypothetical protein 1261 43.50 0 1362751..1362927 - 58 196156086 - MADE_01267 - hypothetical protein 1262 46.48 0 1363184..1363837 + 217 196156087 - MADE_01268 - hypothetical protein 1263 43.23 0 1363873..1364448 - 191 196156088 - MADE_01269 - hypothetical protein 1264 45.30 0 1364475..1364708 - 77 196156089 - MADE_01270 - hypothetical protein 1265 42.50 0 1364792..1365304 - 170 196156090 - MADE_01271 - hypothetical protein 1266 46.67 0 1365308..1365637 - 109 196156091 - MADE_01272 - hypothetical protein 1267 44.52 0 1365826..1367934 - 702 196156092 - MADE_01273 - putative two-component sensor histidine kinase and response regulator hybrid 1268 44.59 0 1367947..1368399 - 150 196156093 - MADE_01274 - putative two-component response regulator 1269 42.00 0 1368389..1369900 - 503 196156094 - MADE_01275 - putative two-component sensor histidine kinase 1270 44.89 0 1369905..1370129 - 74 196156095 - MADE_01276 - putative orphan protein 1271 44.37 0 1370149..1371480 - 443 196156096 - MADE_01277 - putative sigma-54 interacting response regulator protein 1272 49.40 +1 1371995..1372573 + 192 196156097 - MADE_01278 - probable exopolysaccharide synthesis protein 1273 45.35 0 1372596..1373519 - 307 196156098 - MADE_01279 - putative transcriptional regulator with periplasmic binding protein domain (LysR family) 44.90 MEAN 3.40 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0