version 1.0
Alteromonas macleodii 'Deep ecotype', complete genome - 1..4412282 4072 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1037 43.07 0 1107199..1107855 + 218 196155862 - MADE_01043 - hypothetical protein 1038 41.06 -1 1108251..1108457 - 68 196155863 - MADE_01044 - Antitoxin of toxin-antitoxin stability system, StbD family protein 1039 46.20 0 1108858..1109976 - 372 196155864 - MADE_01045 - Succinylglutamate desuccinylase/aspartoacylase 1040 46.69 0 1110068..1110838 - 256 196155865 - MADE_01046 - molybdopterin biosynthesis protein MoeB 1041 48.92 +1 1110963..1111469 + 168 196155866 - MADE_01047 - molybdenum cofactor biosynthesis protein B 1042 45.81 0 1111466..1111954 + 162 196155867 - MADE_01048 - molybdenum cofactor biosynthesis protein C 1043 48.19 0 1112041..1112289 + 82 196155868 - MADE_01049 - molybdopterin converting factor, small subunit 1044 47.05 0 1112292..1112765 + 157 196155869 - MADE_01050 - putative molybdenum cofactor biosynthesisprotein E 1045 48.02 0 1112765..1114153 + 462 196155870 - MADE_01051 - molybdate-binding periplasmic protein precursor 1046 47.37 0 1114150..1114890 + 246 196155871 - MADE_01052 - molybdenum ABC transporter, permease protein 1047 45.64 0 1114892..1116037 + 381 196155872 - MADE_01053 - molybdenum ABC transporter, ATP-binding protein 1048 42.27 0 1116024..1117400 - 458 196155873 - MADE_01054 - coproporphyrinogen III oxidase 1049 49.39 +1 1117581..1118234 + 217 196155874 - MADE_01055 - hypothetical protein 1050 46.38 0 1118371..1119006 + 211 196155875 - MADE_01056 - probable DSBA oxidoreductase 1051 48.94 +1 1119037..1120029 + 330 196155876 - MADE_01057 - putative xanthine dehydrogenase accessory factor 1052 47.39 0 1120026..1122608 - 860 196155877 - MADE_01058 - TonB-dependent receptor 1053 32.54 -2 1122828..1122953 - 41 196155878 - MADE_01059 - hypothetical protein 1054 47.38 0 1122961..1123629 + 222 196155879 - MADE_01060 - Phosphoglycerate/bisphosphoglycerate mutase 1055 47.25 0 1123641..1124876 + 411 196155880 - MADE_01061 - putative acyl-CoA dehydrogenase 1056 46.08 0 1124879..1125937 + 352 196155881 - MADE_01062 - aminoglycoside phosphotransferase 1057 46.97 0 1126012..1126986 + 324 196155882 - MADE_01063 - Zinc-containing alcohol dehydrogenase superfamily protein 1058 41.07 -1 1127161..1127328 - 55 196155883 - MADE_01064 - hypothetical protein 1059 43.07 0 1127597..1128130 - 177 196155884 - MADE_01065 - SEC-C motif domain protein 1060 41.12 -1 1128251..1128661 - 136 196155885 - MADE_01066 - deoxyguanosinetriphosphate triphosphohydrolase-like protein 1061 44.36 0 1128966..1129364 + 132 196155886 - MADE_01067 - membrane protein-like protein 1062 43.95 0 1129389..1130066 - 225 196155887 - MADE_01068 - Ferric reductase-like transmembrane component 1063 46.03 0 1130175..1131182 - 335 196155888 - MADE_01069 - oxidoreductase, molybdopterin binding 1064 47.77 0 1131383..1132726 - 447 196155889 - MADE_01070 - deoxyguanosinetriphosphate triphosphohydrolase-like protein 1065 42.00 0 1132806..1133405 - 199 196155890 - MADE_01071 - metal dependent phosphohydrolase 1066 45.13 0 1133407..1134627 - 406 196155891 - MADE_01072 - aminotransferase, class I 1067 43.65 0 1134900..1135694 + 264 196155892 - MADE_01073 - putative cytochrome c oxidase, subunit I 1068 46.36 0 1136094..1136423 + 109 196155893 - MADE_01074 - hypothetical protein 1069 45.47 0 1136528..1139608 - 1026 196155894 - MADE_01075 - AcrB/AcrD/AcrF family protein 1070 46.69 0 1139605..1142973 - 1122 196155895 - MADE_01076 - AcrB/AcrD/AcrF family protein 1071 45.00 0 1142998..1144128 - 376 196155896 - MADE_01077 - HlyD family secretion protein 1072 42.99 0 1144342..1144776 - 144 196155897 - MADE_01078 - putative inner membrane protein 1073 44.88 0 1144808..1145725 - 305 196155898 - MADE_01079 - hypothetical protein 1074 47.70 0 1145758..1146495 + 245 196155899 - MADE_01080 - LamB/YcsF family protein 1075 50.07 +1 1146552..1147286 + 244 196155900 - MADE_01081 - Allophanate hydrolase, subunit 1 1076 48.58 +1 1147240..1148223 + 327 196155901 - MADE_01082 - putative carboxylase 1077 44.41 0 1148220..1149086 + 288 196155902 - MADE_01083 - D-alanine transaminase 1078 39.86 -1 1149142..1149570 - 142 196155903 - MADE_01084 - ferric uptake regulator 1079 44.43 0 1149874..1151892 + 672 196155904 - MADE_01085 - methyl-accepting chemotaxis protein 1080 45.52 0 1152028..1152552 - 174 196155905 - MADE_01086 - flavodoxin 1081 41.55 0 1152579..1152797 - 72 196155906 - MADE_01087 - hypothetical protein 1082 42.86 0 1152922..1153614 - 230 196155907 - MADE_01088 - hypothetical esterase/lipase ybfF 1083 46.25 0 1153749..1153988 + 79 196155908 - MADE_01089 - hypothetical protein 1084 39.52 -1 1159935..1160936 + 333 196155909 - MADE_01090 - sensory box/GGDEF family protein 1085 40.98 -1 1160983..1161348 - 121 196155910 - MADE_01091 - hypothetical protein 1086 42.88 0 1161351..1164629 - 1092 196155911 - MADE_01092 - transcriptional regulator 1087 46.87 0 1164834..1165328 + 164 196155912 - MADE_01093 - hypothetical protein 1088 41.67 0 1165480..1166331 + 283 196155913 - MADE_01094 - hypothetical protein 1089 40.92 -1 1166328..1167092 + 254 196155914 - MADE_01095 - hypothetical protein 1090 42.09 0 1167392..1167928 + 178 196155915 - MADE_01096 - adenine phosphoribosyltransferase 1091 47.05 0 1167972..1170764 + 930 196155916 - MADE_01097 - DNA polymerase III subunits gamma and tau 1092 48.18 0 1170803..1171132 + 109 196155917 - MADE_01098 - hypothetical protein 1093 42.20 0 1171624..1174092 + 822 196155918 - MADE_01099 - bacteriophytochrome protein 1094 41.43 -1 1174097..1176493 + 798 196155919 - MADE_01100 - sensory box/GGDEF family protein 1095 41.03 -1 1176465..1176581 + 38 196155920 - MADE_01101 - hypothetical protein 1096 41.88 0 1176708..1177655 + 315 196155921 - MADE_01102 - hypothetical protein 1097 50.10 +1 1177742..1178260 + 172 196155922 - MADE_01103 - recombination protein RecR 1098 45.76 0 1178473..1180395 + 640 196155923 - MADE_01104 - heat shock protein 90 1099 47.60 0 1180744..1181388 + 214 196155924 - MADE_01105 - adenylate kinase(ATP-AMP transphosphorylase) 1100 48.23 0 1181538..1181933 + 131 196155925 - MADE_01106 - uncharacterized relative of glutathione S-transferase 1101 47.94 0 1182235..1184850 - 871 196155926 - MADE_01107 - TonB-dependent receptor 1102 45.79 0 1185581..1188445 + 954 196155927 - MADE_01108 - peptidase, M16 family protein 1103 45.61 0 1188536..1190767 - 743 196155928 - MADE_01109 - methyl-accepting chemotaxis protein 1104 43.21 0 1190984..1191844 + 286 196155929 - MADE_01110 - putative transporter (formate/nitrite transporter family) protein 1105 46.93 0 1191949..1192566 - 205 196155930 - MADE_01111 - phosphoribosyl-ATP pyrophosphatase/phosphoribosyl-AMP cyclohydrolase 1106 48.95 +1 1192563..1193375 - 270 196155931 - MADE_01112 - imidazole glycerol phosphate synthase subunit HisF 1107 49.32 +1 1193357..1194094 - 245 196155932 - MADE_01113 - phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 1108 46.19 0 1194094..1194723 - 209 196155933 - MADE_01114 - imidazole glycerol phosphate synthase subunit HisH 1109 47.43 0 1194723..1195793 - 356 196155934 - MADE_01115 - imidazole glycerol-phosphate dehydratase/histidinol phosphatase 1110 45.19 0 1195790..1196869 - 359 196155935 - MADE_01116 - histidinol-phosphate aminotransferase 1111 50.19 +1 1196869..1198173 - 434 196155936 - MADE_01117 - Histidinol dehydrogenase 1112 47.62 0 1198187..1199089 - 300 196155937 - MADE_01118 - ATP phosphoribosyltransferase 1113 38.62 -1 1199491..1199736 + 81 196155938 - MADE_01119 - hypothetical protein 1114 46.54 0 1199934..1201652 + 572 196155939 - MADE_01120 - iron-regulated outer membrane virulence protein 1115 45.20 0 1201649..1202221 - 190 196155940 - MADE_01121 - putative lipoprotein 1116 42.28 0 1202386..1202631 - 81 196155941 - MADE_01122 - Na(+)-translocating NADH-quinone reductase subunit B 1117 42.67 0 1202780..1203325 - 181 196155942 - MADE_01123 - hypothetical protein 1118 45.54 0 1203414..1204322 + 302 196155943 - MADE_01124 - hypothetical protein 1119 46.90 0 1204407..1205711 + 434 196155944 - MADE_01125 - alpha-amylase, putative 1120 44.75 0 1205830..1206048 + 72 196155945 - MADE_01126 - putative orphan protein 1121 42.18 0 1206288..1206581 + 97 196155946 - MADE_01127 - putative orphan protein 1122 50.91 +1 1206696..1207298 - 200 196155947 - MADE_01128 - hypothetical protein 1123 43.69 0 1207443..1208108 - 221 196155948 - MADE_01129 - putative calcium binding protein 1124 44.74 0 1208311..1208424 - 37 196155949 - MADE_01130 - hypothetical protein 1125 48.85 +1 1208519..1210438 + 639 196155950 - MADE_01131 - ATP-dependent helicase 1126 49.51 +1 1210517..1211227 + 236 196155951 - MADE_01132 - peptidase M22, glycoprotease 1127 42.52 0 1211338..1211631 + 97 196155952 - MADE_01133 - hypothetical protein 1128 32.52 -2 1211847..1211969 + 40 196155953 - MADE_01134 - hypothetical protein 1129 46.42 0 1212017..1212673 + 218 196155954 - MADE_01135 - Starvation-inducible outer membrane lipoprotein 1130 43.21 0 1212770..1213609 + 279 196155955 - MADE_01136 - hydrolase, alpha/beta fold family protein 1131 45.61 0 1213731..1215383 + 550 196155956 - MADE_01137 - acyl-CoA synthetase (long-chain-fatty-acid-CoA ligase), acyl-adenylate activating enzyme 1132 46.55 0 1215445..1216602 + 385 196155957 - MADE_01138 - ribonuclease D 1133 41.41 -1 1216661..1216957 + 98 196155958 - MADE_01139 - hypothetical protein 1134 35.51 -2 1216932..1217069 - 45 196155959 - MADE_01140 - hypothetical protein 1135 45.58 0 1217056..1218027 + 323 196155960 - MADE_01141 - putative transglycosylase 1136 45.59 0 1218030..1218698 + 222 196155961 - MADE_01142 - putative fumarylacetoacetate hydrolase family protein 44.90 MEAN 3.40 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0