version 1.0
Agrobacterium tumefaciens str. C58 chromosome linear, complete sequence - 1..2075577 1851 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 877 57.32 0 989206..990072 - 288 15891068 - Atu3894 - ABC transporter, membrane spanning protein (sugar) 878 60.97 0 990075..991145 - 356 15891067 - Atu3895 - ABC transporter, nucleotide binding/ATPase protein (sugar) 879 59.85 0 991160..992230 - 356 15891066 - Atu3896 - ABC transporter, nucleotide binding/ATPase protein (sugar) 880 59.71 0 992268..993791 - 507 15891065 glpD Atu3897 - glycerol-3-phosphate dehydrogenase 881 57.88 0 993899..994672 - 257 15891064 glpR Atu3898 - DeoR family transcriptional regulator 882 61.76 0 994814..996241 - 475 159185937 cysG Atu3899 - siroheme synthase 883 62.97 +1 996252..998900 - 882 159185938 nasA Atu3900 - nitrate reductase large subunit 884 59.52 0 999115..999450 - 111 159185939 nirD Atu3901 - nitrite reductase small subunit 885 60.21 0 999456..1001903 - 815 159185940 nirB Atu3902 - nitrite reductase large subunit 886 59.77 0 1001909..1002706 - 265 15891059 nrtC Atu3903 - ABC transporter, nucleotide binding/ATPase protein (nitrate) 887 61.41 0 1002720..1003613 - 297 159185941 nrtB Atu3904 - ABC transporter, membrane spanning protein (nitrate) 888 60.02 0 1003727..1005019 - 430 159185942 ntrA Atu3905 - ABC transporter, substrate binding protein (nitrate) 889 61.57 0 1005400..1006695 - 431 15891056 nrtC Atu3906 - ABC transporter, nucleotide binding/ATPase protein (nitrate) 890 59.01 0 1006731..1007318 - 195 159185943 nasT Atu3907 - two component response regulator 891 59.01 0 1007420..1008085 - 221 159185944 - Atu3908 - GntR family transcriptional regulator 892 61.19 0 1008352..1009593 + 413 159185945 - Atu3909 - hypothetical protein 893 62.89 +1 1009717..1010484 + 255 15891052 - Atu3910 - hypothetical protein 894 62.10 0 1010496..1011305 + 269 15891051 - Atu3911 - hypothetical protein 895 62.26 0 1011313..1012923 + 536 159185946 - Atu3912 - hypothetical protein 896 61.06 0 1012920..1014650 + 576 15891049 - Atu3913 - biotin carboxylase 897 57.66 0 1014762..1016249 + 495 159185947 amyA Atu3914 - cytoplasmic alpha-amylase 898 61.18 0 1016266..1016721 - 151 159185948 soxR Atu3915 - MerR family transcriptional regulator 899 58.08 0 1016911..1019019 - 702 159185949 bfrA Atu3916 - exogenous ferric siderophore receptor 900 61.09 0 1019167..1020636 + 489 159185950 - Atu3917 - hypothetical protein 901 58.25 0 1020642..1021841 - 399 15891044 - Atu3918 - hypothetical protein 902 56.84 0 1021897..1022181 - 94 159185951 - Atu3919 - hypothetical protein 903 55.17 -1 1022278..1022538 + 86 159185952 - Atu3920 - hypothetical protein 904 45.28 -2 1022584..1022742 + 52 17937624 - Atu3921 - hypothetical protein 905 54.07 -1 1022888..1024165 - 425 159185953 repC Atu3922 - replication protein C 906 58.09 0 1024351..1025364 - 337 15891040 repB Atu3923 - replication protein B 907 57.86 0 1025361..1026575 - 404 159185954 repA Atu3924 - replication protein A 908 57.16 0 1027010..1028398 + 462 15891038 - Atu3925 - hypothetical protein 909 58.08 0 1028765..1029160 + 131 159185955 - Atu3926 - translation initiation inhibitor 910 59.14 0 1029193..1030281 + 362 15891036 - Atu3927 - hypothetical protein 911 59.84 0 1030354..1031832 + 492 159185956 - Atu3928 - hypothetical protein 912 55.50 -1 1031845..1032417 - 190 15891034 - Atu3929 - hypothetical protein 913 57.76 0 1032456..1033466 - 336 159185957 - Atu3930 - hypothetical protein 914 63.08 +1 1033662..1035335 - 557 159185958 hutU Atu3931 - urocanate hydratase 915 57.55 0 1035350..1036150 - 266 159185959 - Atu3932 - hypothetical protein 916 63.24 +1 1036224..1037768 - 514 15891030 hutH Atu3933 - histidine ammonia-lyase 917 61.59 0 1037765..1039024 - 419 159185960 hutI Atu3934 - imidazolonepropionase 918 59.99 0 1039138..1040484 + 448 159185961 - Atu3935 - N-formimino-L-glutamate deiminase 919 59.97 0 1040507..1041253 + 248 159185962 - Atu3936 - GntR family transcriptional regulator 920 48.97 -2 1044310..1044699 - 129 159185963 - Atu3940 - hypothetical protein 921 52.71 -2 1047307..1047564 + 85 15891024 - Atu3942 - hypothetical protein 922 59.27 0 1048988..1050298 - 436 159185964 ordL Atu3947 - oxidoreductase 923 60.38 0 1050598..1051743 + 381 159185965 - Atu3948 - hypothetical protein 924 60.32 0 1051754..1052698 + 314 159185966 arcB Atu3949 - ornithine cyclodeaminase 925 57.89 0 1052716..1054173 + 485 159185967 - Atu3950 - aldehyde dehydrogenase 926 59.56 0 1054176..1055090 - 304 15891018 - Atu3951 - LysR family transcriptional regulator 927 61.10 0 1055276..1056604 + 442 15891017 - Atu3952 - oxidoreductase 928 60.86 0 1056739..1057737 - 332 15891016 - Atu3953 - hypothetical protein 929 60.92 0 1057765..1058616 - 283 15891015 - Atu3954 - ABC transporter, membrane spanning protein 930 61.25 0 1058613..1059461 - 282 15891014 - Atu3955 - ABC transporter, membrane spanning protein 931 59.52 0 1059475..1060566 - 363 159185968 - Atu3956 - ABC transporter, nucleotide binding/ATPase protein 932 56.09 -1 1060653..1061531 - 292 159185969 - Atu3957 - ABC transporter, substrate binding protein (glycine-betaine) 933 60.73 0 1061583..1062929 - 448 159185970 - Atu3958 - oxidoreductase 934 60.47 0 1062926..1064443 - 505 159185971 dhaL Atu3959 - aldehyde dehydrogenase 935 59.10 0 1064436..1065347 - 303 15891009 dapA Atu3960 - dihydrodipicolinate synthase 936 57.87 0 1065344..1066093 - 249 159185972 - Atu3961 - GntR family transcriptional regulator 937 60.00 0 1066585..1067394 - 269 159185973 - Atu3962 - calcium-binding protein, regucalcin 938 61.95 0 1067535..1068233 - 232 159185974 - Atu3963 - GntR family transcriptional regulator 939 60.45 0 1068391..1069404 + 337 159185975 - Atu3964 - dehydrogenase 940 60.28 0 1069397..1070413 + 338 15891004 - Atu3965 - oxidoreductase 941 62.29 0 1070410..1071483 + 357 15891003 - Atu3966 - oxidoreductase 942 60.30 0 1071506..1072777 + 423 15891002 - Atu3967 - ABC transporter, substrate binding protein (sugar) 943 59.86 0 1072835..1073803 + 322 15891001 - Atu3968 - ABC transporter, membrane spanning protein (sugar) 944 58.40 0 1074066..1074839 + 257 159185976 - Atu3969 - ABC transporter, membrane spanning protein (sugar) 945 60.46 0 1074862..1075941 + 359 159185977 - Atu3970 - ABC transporter, nucleotide binding/ATPase protein (sugar) 946 61.33 0 1075979..1077703 + 574 15890998 ilvD Atu3971 - dihydroxy-acid dehydratase 947 59.77 0 1077713..1078510 + 265 15890997 - Atu3972 - hypothetical protein 948 62.87 +1 1078544..1079254 + 236 15890996 - Atu3973 - hypothetical protein 949 62.49 0 1079363..1084558 - 1731 15890995 ina Atu3974 - ice nucleation-like protein 950 58.20 0 1084774..1085931 - 385 159185978 glf Atu3975 - UDP-galactopyranose mutase 951 60.70 0 1086033..1088078 - 681 159185979 - Atu3976 - hypothetical protein 952 61.21 0 1088570..1091539 - 989 159185980 ina Atu3977 - ice nucleation-like protein 953 60.56 0 1092295..1093194 - 299 15890991 - Atu3978 - LysR family transcriptional regulator 954 59.70 0 1093313..1094245 + 310 159185981 - Atu3979 - dioxygenase 955 58.84 0 1094384..1095073 + 229 159185982 - Atu3980 - hydrolase 956 60.48 0 1095147..1095437 + 96 159186375 - Atu8193 - hypothetical protein 957 59.51 0 1095437..1097419 + 660 159185983 - Atu3982 - hypothetical protein 958 57.37 0 1097629..1098069 + 146 15890986 - Atu8194 - hypothetical protein 959 62.48 0 1098066..1099664 + 532 15890985 - Atu3984 - MFS permease 960 62.32 0 1099720..1100502 - 260 15890984 proC Atu3985 - pyrroline-5-carboxylate reductase 961 58.74 0 1100720..1101337 + 205 159185984 - Atu3986 - hypothetical protein 962 64.29 +1 1101334..1102215 - 293 15890982 hexA Atu3987 - LysR family transcriptional regulator 963 61.01 0 1102339..1103859 + 506 15890981 - Atu3988 - MFS permease 964 56.39 0 1104207..1104683 - 158 15890979 copC Atu3990 - copper tolerance protein 965 59.63 0 1104727..1106076 - 449 15890978 copA Atu3991 - multicopper oxidase 966 62.07 0 1106091..1107569 - 492 15890977 copB Atu3992 - copper tolerance protein 967 57.66 0 1107884..1108294 - 136 159186376 - Atu8195 - hypothetical protein 968 61.35 0 1108391..1109311 - 306 159185985 - Atu3994 - hypothetical protein 969 61.85 0 1109394..1110182 - 262 159185986 - Atu3995 - AraC family transcriptional regulator 970 61.52 0 1110393..1110839 - 148 159185987 - Atu3996 - hypothetical protein 971 60.49 0 1111072..1112091 + 339 15890971 bioB Atu3997 - biotin synthetase 972 63.96 +1 1112088..1113233 + 381 15890970 bioF Atu3998 - 8-amino-7-oxononanoate synthase 973 62.75 0 1113230..1113868 + 212 15890969 bioD Atu3999 - dithiobiotin synthetase 974 60.63 0 1113865..1115157 + 430 15890968 bioA Atu4000 - adenosylmethionine--8-amino-7-oxononanoate transaminase 975 63.32 +1 1115195..1116181 + 328 159185988 fabH Atu4001 - 3-oxoacyl-(acyl carrier protein) synthase II 976 64.21 +1 1116218..1117111 - 297 15890966 - Atu4002 - hypothetical protein 59.48 MEAN 3.31 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.