version 1.0
Agrobacterium tumefaciens str. C58 chromosome linear, complete sequence - 1..2075577 1851 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 812 48.07 -2 920424..921407 - 327 15891127 - Atu3824 - hypothetical protein 813 59.57 0 922011..922841 + 276 15891126 - Atu3826 - acyl-CoA hydrolase 814 59.23 0 922844..923731 + 295 15891125 - Atu3827 - LysR family transcriptional regulator 815 56.65 0 923782..924360 + 192 15891124 - Atu3828 - acetyltransferase 816 61.50 0 924427..925278 - 283 15891123 - Atu3829 - LysR family transcriptional regulator 817 61.58 0 925369..926625 + 418 15891122 - Atu3830 - MFS permease 818 56.17 0 926945..928135 + 396 15891121 int Atu3831 - phage-related integrase 819 47.73 -2 928343..929884 + 513 15891120 - Atu3832 - hypothetical protein 820 49.63 -2 930048..930587 - 179 15891119 - Atu3833 - hypothetical protein 821 49.86 -2 930600..931295 - 231 15891118 - Atu3834 - hypothetical protein 822 46.31 -2 931282..932067 - 261 15891117 - Atu3835 - hypothetical protein 823 52.85 -2 932358..932936 - 192 159185911 - Atu3836 - hypothetical protein 824 54.12 -1 932981..933235 - 84 159185912 - Atu3837 - hypothetical protein 825 56.55 0 933309..933743 - 144 17937543 - Atu3838 - hypothetical protein 826 61.49 0 935740..936048 - 102 17937545 - Atu3840 - hypothetical protein 827 53.04 -1 936047..936523 + 158 17937546 - Atu3841 - hypothetical protein 828 47.38 -2 936504..937094 - 196 15891112 - Atu3842 - hypothetical protein 829 48.82 -2 937437..938579 + 380 159185913 - Atu3843 - hypothetical protein 830 46.20 -2 938631..939143 + 170 15891110 - Atu3844 - hypothetical protein 831 61.23 0 939216..939896 - 226 15891109 - Atu3845 - hypothetical protein 832 57.82 0 939917..940357 - 146 17937551 - Atu3846 - hypothetical protein 833 58.81 0 940426..940947 - 173 159185914 - Atu3847 - hypothetical protein 834 55.44 -1 941336..941629 + 97 159185915 - Atu3848 - hypothetical protein 835 57.98 0 941783..942415 + 210 159185916 - Atu3849 - resolvase 836 58.50 0 942412..942705 + 97 15891105 - Atu3850 - hypothetical protein 837 59.08 0 943008..943310 - 100 159185917 - Atu3851 - hypothetical protein 838 59.93 0 943321..943587 - 88 159185918 - Atu3852 - hypothetical protein 839 53.67 -1 943741..943917 + 58 17937558 - Atu3853 - hypothetical protein 840 58.76 0 944097..946196 - 699 159185919 - Atu3854 - hypothetical protein 841 55.67 -1 946422..946721 + 99 17937561 - Atu3856 - hypothetical protein 842 55.26 -1 946765..947562 - 265 17937562 - Atu3857 - hypothetical protein 843 50.13 -2 947608..947988 + 126 159185920 - Atu3858 - hypothetical protein 844 59.22 0 948602..950845 - 747 15891101 - Atu3860 - hypothetical protein 845 60.77 0 951014..951403 - 129 159185921 - Atu3861 - acyl-CoA hydrolase 846 58.12 0 951538..951771 + 77 15891099 - Atu3862 - hypothetical protein 847 60.32 0 951813..953294 - 493 159185922 exsE Atu3863 - ABC transporter, nucleotide binding/ATPase protein 848 57.51 0 953425..953697 - 90 17937568 - Atu3864 - hypothetical protein 849 61.41 0 953911..957237 + 1108 159185923 - Atu3865 - hypothetical protein 850 60.72 0 957239..959644 + 801 15891096 - Atu3866 - hypothetical protein 851 60.41 0 959649..960527 + 292 159185924 - Atu3867 - hypothetical protein 852 55.45 -1 960696..961934 + 412 15891094 - Atu3868 - hypothetical protein 853 58.84 0 962082..963704 + 540 159185925 - Atu3869 - ABC transporter, nucleotide binding/ATPase protein 854 59.37 0 963765..964778 + 337 15891092 ldhA Atu3870 - D-lactate dehydrogenase 855 59.69 0 964886..966031 + 381 15891091 lldA Atu3871 - L-lactate dehydrogenase 856 59.13 0 966061..966405 - 114 159185926 - Atu3872 - hypothetical protein 857 58.31 0 966601..967581 + 326 159185927 - Atu3873 - hypothetical protein 858 62.88 +1 967837..969315 - 492 159185928 lyxK Atu3874 - L-xylulose kinase 859 59.55 0 969329..970171 - 280 159185929 - Atu3875 - aldolase 860 60.81 0 970174..971898 - 574 15891086 glpD Atu3876 - glycerol-3-phosphate dehydrogenase 861 62.26 0 972021..973019 - 332 15891085 - Atu3877 - aldo-keto reductase 862 62.71 0 973016..973951 - 311 159185930 - Atu3878 - transcriptional regulator 863 60.18 0 974032..975033 - 333 15891083 - Atu3879 - ABC transporter, membrane spanning protein (sugar) 864 60.03 0 975046..976566 - 506 15891082 - Atu3880 - ABC transporter, nucleotide binding/ATPase protein (sugar) 865 56.61 0 976639..977652 - 337 159185931 - Atu3881 - ABC transporter, substrate binding protein (sugar) 866 54.82 -1 978116..978478 - 120 159185932 - Atu3883 - chemotaxis response regulator 867 58.53 0 978660..979544 + 294 15891079 - Atu3884 - hypothetical protein 868 59.85 0 979862..980638 + 258 159185933 - Atu3885 - inositol monophosphatase family protein 869 61.57 0 980660..981601 - 313 15891077 pldB Atu3886 - lysophospholipase 870 58.80 0 981981..982463 + 160 15891075 hspL Atu3887 - small heat shock protein 871 59.12 0 982526..983545 - 339 159185934 - Atu3888 - hypothetical protein 872 61.67 0 983644..984504 + 286 15891073 - Atu3889 - LysR family transcriptional regulator 873 61.40 0 984511..986010 - 499 159185935 glpK Atu3890 - glycerol kinase 874 57.78 0 986083..987804 - 573 15891071 - Atu3891 - hypothetical protein 875 60.88 0 987992..988285 - 97 159185936 - Atu3892 - hypothetical protein 876 58.14 0 988288..989202 - 304 15891069 - Atu3893 - ABC transporter, membrane spanning protein (sugarl) 877 57.32 0 989206..990072 - 288 15891068 - Atu3894 - ABC transporter, membrane spanning protein (sugar) 878 60.97 0 990075..991145 - 356 15891067 - Atu3895 - ABC transporter, nucleotide binding/ATPase protein (sugar) 879 59.85 0 991160..992230 - 356 15891066 - Atu3896 - ABC transporter, nucleotide binding/ATPase protein (sugar) 880 59.71 0 992268..993791 - 507 15891065 glpD Atu3897 - glycerol-3-phosphate dehydrogenase 881 57.88 0 993899..994672 - 257 15891064 glpR Atu3898 - DeoR family transcriptional regulator 882 61.76 0 994814..996241 - 475 159185937 cysG Atu3899 - siroheme synthase 883 62.97 +1 996252..998900 - 882 159185938 nasA Atu3900 - nitrate reductase large subunit 884 59.52 0 999115..999450 - 111 159185939 nirD Atu3901 - nitrite reductase small subunit 885 60.21 0 999456..1001903 - 815 159185940 nirB Atu3902 - nitrite reductase large subunit 886 59.77 0 1001909..1002706 - 265 15891059 nrtC Atu3903 - ABC transporter, nucleotide binding/ATPase protein (nitrate) 887 61.41 0 1002720..1003613 - 297 159185941 nrtB Atu3904 - ABC transporter, membrane spanning protein (nitrate) 888 60.02 0 1003727..1005019 - 430 159185942 ntrA Atu3905 - ABC transporter, substrate binding protein (nitrate) 889 61.57 0 1005400..1006695 - 431 15891056 nrtC Atu3906 - ABC transporter, nucleotide binding/ATPase protein (nitrate) 890 59.01 0 1006731..1007318 - 195 159185943 nasT Atu3907 - two component response regulator 891 59.01 0 1007420..1008085 - 221 159185944 - Atu3908 - GntR family transcriptional regulator 892 61.19 0 1008352..1009593 + 413 159185945 - Atu3909 - hypothetical protein 893 62.89 +1 1009717..1010484 + 255 15891052 - Atu3910 - hypothetical protein 894 62.10 0 1010496..1011305 + 269 15891051 - Atu3911 - hypothetical protein 895 62.26 0 1011313..1012923 + 536 159185946 - Atu3912 - hypothetical protein 896 61.06 0 1012920..1014650 + 576 15891049 - Atu3913 - biotin carboxylase 897 57.66 0 1014762..1016249 + 495 159185947 amyA Atu3914 - cytoplasmic alpha-amylase 898 61.18 0 1016266..1016721 - 151 159185948 soxR Atu3915 - MerR family transcriptional regulator 899 58.08 0 1016911..1019019 - 702 159185949 bfrA Atu3916 - exogenous ferric siderophore receptor 900 61.09 0 1019167..1020636 + 489 159185950 - Atu3917 - hypothetical protein 901 58.25 0 1020642..1021841 - 399 15891044 - Atu3918 - hypothetical protein 902 56.84 0 1021897..1022181 - 94 159185951 - Atu3919 - hypothetical protein 903 55.17 -1 1022278..1022538 + 86 159185952 - Atu3920 - hypothetical protein 904 45.28 -2 1022584..1022742 + 52 17937624 - Atu3921 - hypothetical protein 905 54.07 -1 1022888..1024165 - 425 159185953 repC Atu3922 - replication protein C 906 58.09 0 1024351..1025364 - 337 15891040 repB Atu3923 - replication protein B 907 57.86 0 1025361..1026575 - 404 159185954 repA Atu3924 - replication protein A 908 57.16 0 1027010..1028398 + 462 15891038 - Atu3925 - hypothetical protein 909 58.08 0 1028765..1029160 + 131 159185955 - Atu3926 - translation initiation inhibitor 910 59.14 0 1029193..1030281 + 362 15891036 - Atu3927 - hypothetical protein 911 59.84 0 1030354..1031832 + 492 159185956 - Atu3928 - hypothetical protein 59.48 MEAN 3.31 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.