version 1.0
Agrobacterium tumefaciens str. C58 chromosome linear, complete sequence - 1..2075577 1851 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 642 56.29 0 702043..702909 + 288 15891291 - Atu3651 - hypothetical protein 643 55.04 -1 703047..703889 + 280 159185843 - Atu3652 - hypothetical protein 644 52.32 -2 703937..704173 - 78 17937360 - Atu3653 - hypothetical protein 645 50.78 -2 704727..705242 - 171 159185844 - Atu3654 - hypothetical protein 646 52.91 -1 705579..706145 + 188 159185845 - Atu3655 - antioxidant enzyme 647 55.56 -1 706326..706712 + 128 15891287 - Atu3656 - acetyltransferase 648 47.39 -2 706981..707229 + 82 15891286 - Atu3657 - hypothetical protein 649 52.76 -2 707492..708577 + 361 159185846 - Atu3658 - MerR family transcriptional regulator 650 53.94 -1 709086..709745 - 219 159185847 - Atu3661 - hypothetical protein 651 51.71 -2 710360..711970 + 536 15891283 - Atu3662 - hypothetical protein 652 57.68 0 712197..712619 - 140 159185848 - Atu3663 - hypothetical protein 653 58.85 0 712794..713765 + 323 159185849 ephA Atu3664 - epoxide hydrolase 654 59.17 0 714038..714784 - 248 15891280 ditI Atu3665 - short-chain dehydrogenase 655 52.78 -2 714854..715033 + 59 15891279 - Atu8034 - hypothetical protein 656 58.82 0 715046..715504 + 152 15891278 - Atu3666 - hypothetical protein 657 56.84 0 715559..716026 + 155 15891277 panD Atu3667 - aspartate alpha-decarboxylase 658 60.15 0 716058..716579 - 173 15891276 - Atu3668 - siderophore biosynthesis protein 659 58.59 0 716694..718055 - 453 159185850 - Atu3669 - siderophore biosynthesis protein 660 59.34 0 718087..721473 - 1128 159185851 - Atu3670 - siderophore biosynthesis protein 661 59.18 0 721484..722551 - 355 15891273 - Atu3671 - siderophore biosynthesis protein 662 61.67 0 722591..727153 - 1520 15891272 - Atu3672 - polyketide synthase, siderophore biosynthesis protein 663 59.83 0 727195..729447 - 750 159185852 - Atu3673 - siderophore biosynthesis protein 664 48.04 -2 729520..729723 - 67 17937381 - Atu3674 - hypothetical protein 665 61.56 0 729769..734331 + 1520 15891270 - Atu3675 - peptide synthetase, siderophore biosynthesis protein 666 59.31 0 734328..735224 + 298 15891269 - Atu3676 - putative siderophore biosynthesis protein 667 60.43 0 735221..736696 + 491 15891268 - Atu3677 - polyketide synthase, siderophore biosynthesis protein 668 59.58 0 736711..736950 + 79 159185853 - Atu3678 - putative siderophore biosynthesis protein 669 62.24 0 736961..737479 + 172 15891266 - Atu3679 - putative siderophore biosynthesis protein 670 59.22 0 737476..738039 + 187 159185854 - Atu3680 - putative siderophore biosynthesis protein 671 61.39 0 738077..742510 + 1477 159185855 - Atu3681 - polyketide synthetase, siderophore biosynthesis protein 672 61.25 0 742507..749706 + 2399 15891263 - Atu3682 - non-ribosomal peptide synthetase, siderophore biosynthesis protein 673 60.28 0 749718..757409 + 2563 159185856 - Atu3683 - peptide synthetase, siderophore biosynthesis protein 674 59.77 0 757414..759081 + 555 15891261 - Atu3684 - siderophore biosynthesis protein 675 58.23 0 759096..759842 + 248 159185857 - Atu3685 - thioesterase, putative siderophore biosynthesis protein 676 58.84 0 759870..760763 + 297 15891259 - Atu3686 - putative siderophore biosynthesis protein 677 56.83 0 760897..763335 + 812 159185858 - Atu3687 - TonB-dependent receptor 678 59.28 0 763389..764309 + 306 159185859 fecB Atu3688 - ABC transporter, membrane spanning protein (iron(III) dicitrate) 679 62.76 0 764306..765355 + 349 15891256 fecC Atu3689 - ABC transporter, membrane spanning protein (iron(III) dicitrate) 680 60.92 0 765352..766326 + 324 159185860 fecD Atu3690 - ABC transporter, membrane spanning protein (iron (III) dicitrate) 681 58.08 0 766319..767122 + 267 15891254 fecE Atu3691 - ABC transporter, nucleotide binding/ATPase protein (iron (III) dicitrate) 682 58.93 0 767474..768016 + 180 159185861 - Atu3692 - sigma factor 683 60.19 0 768064..769035 + 323 15891252 fecR Atu3693 - two component sensor kinase 684 63.88 +1 769161..771206 - 681 159185862 pbpC Atu3694 - penicillin binding protein 685 61.04 0 771236..776692 - 1818 159185863 - Atu3695 - hypothetical protein 686 53.97 -1 776811..776999 - 62 17937403 - Atu3696 - hypothetical protein 687 60.80 0 777010..777657 - 215 159185864 lonD Atu3697 - ATP-dependent protease LA 2 688 60.06 0 777750..778718 - 322 159185865 - Atu3698 - putative thioredoxin 689 54.71 -1 778772..779281 - 169 15891247 - Atu3699 - hypothetical protein 690 58.01 0 779833..780525 + 230 15891246 - Atu3701 - glutathione S-transferase 691 62.99 +1 781025..782167 - 380 159185866 trmU Atu3703 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 692 57.77 0 782420..783610 - 396 159185867 - Atu3704 - hypothetical protein 693 62.19 0 784049..784696 - 215 159185868 - Atu3705 - hypothetical protein 694 58.90 0 785354..786949 - 531 15891242 serA Atu3706 - D-3-phosphoglycerate dehydrogenase 695 60.73 0 787033..788211 - 392 15891241 serC Atu3707 - phosphoserine aminotransferase 696 57.09 0 788425..789270 - 281 159185869 - Atu3708 - outer surface protein 697 59.94 0 789459..790811 - 450 159185870 mrsA Atu3709 - phosphoglucomutase/phosphomannomutase 698 60.25 0 791000..792946 - 648 159185871 ftsH Atu3710 - metalloprotease 699 59.91 0 793101..794432 - 443 15891237 mesJ Atu3711 - hypothetical protein 700 60.81 0 794457..795446 - 329 159185872 - Atu3712 - hypothetical protein 701 64.04 +1 795620..796153 - 177 15891235 palA Atu3713 - omp16 protein 702 59.56 0 796364..797671 - 435 159185873 tolB Atu3714 - translocation protein TolB 703 61.04 0 797692..798846 - 384 15891233 tolA Atu3715 - hypothetical protein 704 61.66 0 798856..799314 - 152 15891232 tolR Atu3716 - tolR protein 705 58.47 0 799373..800092 - 239 159185874 tolQ Atu3717 - tolQ protein 706 58.96 0 800354..800794 - 146 15891230 - Atu3718 - hypothetical protein 707 57.39 0 800919..801446 - 175 159185875 mutT Atu3719 - MutT/nudix family protein 708 57.51 0 801446..802024 - 192 159185876 - Atu3720 - hypothetical protein 709 53.42 -1 802060..802278 - 72 159185877 - Atu3721 - hypothetical protein 710 62.44 0 802331..803371 - 346 15891226 ruvB Atu3722 - Holliday junction DNA helicase B 711 60.19 0 803458..804075 - 205 15891225 ruvA Atu3723 - Holliday junction DNA helicase motor protein 712 62.38 0 804103..804615 - 170 15891224 ruvC Atu3724 - Holliday junction resolvase 713 61.26 0 804862..807171 + 769 159185878 - Atu3725 - methyl-accepting chemotaxis protein 714 60.98 0 807318..808319 + 333 15891222 - Atu3726 - flavin dependant oxidoreductase 715 56.89 0 808406..809152 - 248 15891221 - Atu3727 - hypothetical protein 716 58.13 0 809350..809853 + 167 159185879 - Atu3728 - hypothetical protein 717 59.48 0 809890..810543 - 217 159185880 - Atu3729 - hypothetical protein 718 58.79 0 810848..811672 - 274 15891218 - Atu3730 - hypothetical protein 719 62.93 +1 811772..812359 - 195 15891217 - Atu3731 - 5-formyltetrahydrofolate cyclo-ligase 720 61.66 0 812359..813636 - 425 15891216 - Atu3732 - hemolysin 721 47.89 -2 813639..813851 - 70 17937438 - Atu3733 - hypothetical protein 722 57.41 0 814088..814465 - 125 15891215 - Atu8191 - hypothetical protein 723 58.24 0 814477..814749 - 90 159186374 - Atu8192 - hypothetical protein 724 61.12 0 815073..817055 + 660 15891213 tktA Atu3736 - transketolase 725 60.63 0 817118..818128 + 336 15891212 gapA Atu3737 - glyceraldehyde 3-phosphate dehydrogenase 726 61.63 0 818445..820310 + 621 159185881 - Atu3738 - potassium/proton antiporter 727 60.93 0 820378..821580 + 400 159185882 pgk Atu3739 - phosphoglycerate kinase 728 59.36 0 821772..822797 + 341 15891209 - Atu3740 - fructose bisphosphate aldolase 729 61.78 0 823147..824436 + 429 15891208 - Atu3741 - MFS permease 730 57.56 0 825027..825542 + 171 159185883 - Atu3742 - hypothetical protein 731 57.21 0 825696..825917 - 73 15891206 rpmE Atu3743 - 50S ribosomal protein L31 732 62.50 0 826179..827978 + 599 15891205 - Atu3744 - ABC transporter, nucleotide binding/ATPase protein 733 62.65 0 828081..829724 - 547 15891204 - Atu3745 - putative FAD-binding dehydrogenase 734 63.10 +1 829813..830598 - 261 159185884 motB Atu3746 - hypothetical protein 735 61.78 0 830847..831869 - 340 159185885 - Atu3747 - hypothetical protein 736 61.80 0 832071..832871 - 266 15891201 suhB Atu3748 - extragenic suppressor protein SuhB 737 61.19 0 833035..834147 - 370 15891200 enhC Atu3749 - enhanced entry protein 738 60.09 0 834144..834797 - 217 159185886 thiE Atu3750 - thiamine-phosphate pyrophosphorylase 739 60.26 0 834902..835666 + 254 15891198 - Atu3751 - hypothetical protein 740 52.54 -2 835769..835945 - 58 17937457 - Atu3752 - hypothetical protein 741 56.37 0 836179..836382 + 67 15891197 - Atu3753 - hypothetical protein 59.48 MEAN 3.31 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0