version 1.0
Agrobacterium tumefaciens str. C58 chromosome linear, complete sequence - 1..2075577 1851 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 15 53.74 -1 10885..11178 + 97 15891909 - Atu3017 - phosphoglyceromutase 16 55.21 -1 11249..11632 + 127 159185567 - Atu3018 - hypothetical protein 17 56.80 0 11703..12239 - 178 159185568 - Atu3019 - hypothetical protein 18 56.40 0 12671..13381 + 236 159185569 - Atu3020 - GntR family transcriptional regulator 19 60.04 0 13412..14527 + 371 15891905 - Atu3021 - ABC transporter, nucleotide binding/ATPase protein (sugar) 20 56.56 0 14524..15453 + 309 15891904 - Atu3022 - ABC transporter, membrane spanning protein (sugar) 21 56.92 0 15465..16346 + 293 15891903 - Atu3023 - ABC transporter, membrane spanning protein (sugar) 22 57.06 0 16407..17936 + 509 159185570 - Atu3024 - ABC transporter, membrane spanning protein (sugar) 23 58.82 0 18008..20338 + 776 15891901 - Atu3025 - oligo alginate lyase 24 62.40 0 20354..21103 + 249 15891900 - Atu3026 - short chain dehydrogenase 25 61.28 0 21120..22289 + 389 159186368 - Atu8093 - hypothetical protein 26 60.64 0 22325..23320 + 331 159185571 - Atu3027 - dehydrogenase 27 56.52 0 23317..24114 + 265 15891897 - Atu3028 - hypothetical protein 28 56.25 0 24114..25361 + 415 159185572 gudD Atu3029 - glucarate dehydratase 29 60.21 0 25394..25780 - 128 15891895 - Atu3030 - hypothetical protein 30 58.90 0 25864..26082 + 72 15891894 - Atu3031 - hypothetical protein 31 56.79 0 26127..26531 + 134 15891893 - Atu3032 - hypothetical protein 32 62.92 +1 26596..26835 + 79 159185573 - Atu3033 - hypothetical protein 33 65.39 +1 26854..27402 + 182 159185574 - Atu3034 - ROK family transcriptional regulator 34 60.16 0 27551..29794 - 747 159185575 - Atu3035 - two component response regulator 35 62.39 0 30038..31066 + 342 159185576 - Atu3036 - ABC transporter, membrane spanning protein (dipeptide) 36 60.09 0 31066..31947 + 293 15891888 - Atu3037 - ABC transporter, membrane spanning protein (dipeptide) 37 60.23 0 31952..33598 + 548 15891887 - Atu3038 - ABC transporter, nucleotide binding/ATPase protein (dipeptide) 38 62.17 0 33615..35171 + 518 15891886 - Atu3039 - hydantoinase beta subunit-like protein 39 63.58 +1 35164..36297 + 377 159185577 - Atu3040 - hypothetical protein 40 57.43 0 36341..37954 + 537 15891884 - Atu3041 - ABC transporter, substrate binding protein (dipeptide) 41 63.60 +1 38070..39146 + 358 15891883 - Atu3042 - hypothetical protein 42 61.99 0 39143..40681 + 512 15891882 - Atu3043 - hydantoinase beta subunit-like protein 43 64.02 +1 40726..41670 + 314 159185578 asg Atu3044 - asparaginase 44 57.76 0 41736..42083 - 115 15891880 - Atu3045 - hypothetical protein 45 58.97 0 42150..43475 - 441 159185579 - Atu3046 - oxidoreductase 46 56.12 -1 43487..44377 - 296 159185580 - Atu3047 - ABC transporter, membrane spanning protein (oligopeptide) 47 57.62 0 44419..45369 - 316 15891877 - Atu3048 - ABC transporter, membrane spanning protein (oligopeptide) 48 55.90 -1 45499..47160 - 553 159185581 - Atu3049 - ABC transporter, substrate binding protein (oligopeptide) 49 59.83 0 47297..48628 - 443 159185582 - Atu3050 - putative AgaE 50 60.48 0 48630..49340 - 236 15891874 - Atu3051 - agropine synthesis reductase 51 55.97 -1 49337..49822 - 161 159185583 - Atu3052 - MarR family transcriptional regulator 52 56.28 0 50111..51757 - 548 159185584 - Atu3053 - ABC transporter, nucleotide binding/ATPase protein (peptide) 53 59.15 0 52166..53335 + 389 159185585 - Atu3054 - hypothetical protein 54 58.06 0 53535..54800 - 421 159185586 - Atu3055 - hypothetical protein 55 56.59 0 54845..56809 - 654 15891869 crdS Atu3056 - beta 1,3 glucan synthase catalytic subunit 56 56.93 0 56941..58398 - 485 159185587 - Atu3057 - hypothetical protein 57 57.32 0 58822..60405 + 527 159185588 - Atu3059 - Na+/H+ antiporter 58 58.93 0 60688..62652 - 654 15891866 - Atu3060 - ABC transporter, nucleotide binding/ATPase protein 59 57.74 0 62905..64674 + 589 15891865 - Atu3061 - GGDEF family protein 60 60.74 0 64913..65941 + 342 159185589 - Atu3062 - LacI family transcription regulator 61 58.07 0 65974..66927 + 317 15891863 - Atu3063 - ABC transporter, nucleotide binding/ATPase protein 62 60.20 0 66924..67727 + 267 15891862 - Atu3064 - ABC transporter, nucleotide binding/ATPase protein 63 61.19 0 67724..68728 + 334 15891861 - Atu3065 - ABC transporter, membrane spanning protein (sugar) 64 59.27 0 68733..69800 + 355 15891860 - Atu3066 - resiniferatoxin-binding, phosphotriesterase-related protein 65 60.31 0 69825..70595 + 256 15891859 - Atu3067 - hypothetical protein 66 62.32 0 70605..71501 - 298 15891858 - Atu3068 - ribokinase 67 61.68 0 71526..72368 + 280 15891857 - Atu3069 - hypothetical protein 68 58.70 0 72383..73624 + 413 159185590 amaB Atu3070 - allantoate amidohydrolase 69 57.41 0 73728..74213 + 161 159185591 - Atu3071 - hypothetical protein 70 61.61 0 74687..78721 - 1344 15891854 - Atu3072 - peptide synthetase 71 57.86 0 78886..79578 - 230 159185592 - Atu3073 - aspartate racemase 72 60.85 0 79784..80557 - 257 15891852 - Atu3074 - short chain dehydrogenase 73 60.93 0 80645..81289 + 214 159185593 - Atu3075 - TetR family transcriptional regulator 74 62.21 0 81388..82710 - 440 159185594 uraA Atu3076 - uracil transport protein 75 56.22 0 82966..84123 - 385 159185595 ampC Atu3077 - beta-lactamase 76 63.37 +1 84258..85136 + 292 15891848 ampR Atu3078 - LysR family transcriptional regulator 77 64.86 +1 85146..86363 - 405 159185596 chrA Atu3079 - chromate transport protein 78 65.44 +1 86466..87689 - 407 15891846 - Atu3080 - hypothetical protein 79 60.78 0 87692..89185 - 497 15891845 - Atu3081 - hypothetical protein 80 64.44 +1 89262..89711 - 149 15891844 - Atu8183 - hypothetical protein 81 63.49 +1 89708..90148 - 146 15891843 - Atu3083 - hypothetical protein 82 60.41 0 90145..90687 - 180 159185597 sigW Atu3084 - RNA polymerase sigma factor 83 62.77 0 90839..91582 - 247 15891841 - Atu3085 - hydantoin racemase 84 59.22 0 91594..92412 - 272 15891840 - Atu3086 - ABC transporter, membrane spanning protein (spermidine/putrescine) 85 57.79 0 92416..93327 - 303 159185598 - Atu3087 - ABC transporter, membrane spanning protein (spermidine/putrescine) 86 58.84 0 93565..94854 - 429 15891838 - Atu3088 - ABC transporter, substrate binding protein (spermidine/putrescine) 87 62.25 0 94885..95970 - 361 159185599 - Atu3089 - ABC transporter, nucleotide binding/ATPase protein (spermidine/putrescine) 88 59.02 0 96196..97176 - 326 15891836 - Atu3090 - DNA polymerase III subunit epsilon 89 58.58 0 97368..98270 + 300 159185600 - Atu3091 - hypothetical protein 90 59.26 0 98307..98792 - 161 159185601 - Atu3092 - hypothetical protein 91 62.53 0 98889..99782 - 297 159185602 - Atu3093 - transglycosylase 92 60.22 0 100201..101985 - 594 15891832 mcpA Atu3094 - methyl-accepting chemotaxis protein 93 59.70 0 102222..102695 + 157 159185603 - Atu3095 - hypothetical protein 94 56.77 0 102956..104299 + 447 15891830 ugpB Atu3096 - ABC transporter, substrate binding protein (sn-glycerol 3-phosphate) 95 59.71 0 104382..105272 + 296 15891829 ugpA Atu3097 - sn-glycerol-3-phosphate ABC transporter membrane protein 96 62.15 0 105280..106164 + 294 15891828 ugpE Atu3098 - sn-glycerol-3-phosphate ABC transporter membrane protein 97 62.57 0 106196..107317 + 373 159185604 ugpC Atu3099 - glycerol-3-phosphate transporter ATP-binding subunit 98 54.83 -1 107390..108217 - 275 15891826 - Atu3100 - ABC transporter, membrane spanning protein (sugar) 99 55.63 -1 108214..109092 - 292 159185605 - Atu3101 - ABC transporter, membrane spanning protein (sugar) 100 59.22 0 109168..110442 - 424 15891824 - Atu3102 - ABC transporter, substrate binding protein (sugar) 101 61.36 0 110515..111588 - 357 15891823 - Atu3103 - ABC transporter, nucleotide binding/ATPase protein (sugar) 102 59.46 0 111596..113107 - 503 15891822 arfA Atu3104 - alpha-L-arabinofuranosidase 103 57.53 0 113228..114157 - 309 15891821 celI Atu3105 - hypothetical protein 104 59.29 0 114351..115637 - 428 159185606 - Atu3106 - ABC transporter, substrate binding protein (sugar) 105 61.77 0 115756..116817 + 353 159185607 - Atu3107 - LacI family transcription regulator 106 61.41 0 116810..118693 + 627 15891818 - Atu3108 - hypothetical protein 107 61.65 0 118690..119706 + 338 15891817 - Atu3109 - 2-hydroxyacid dehydrogenase 108 61.09 0 119703..120491 + 262 15891816 - Atu3110 - hypothetical protein 109 59.87 0 120666..121739 - 357 159185608 - Atu3111 - ABC transporter, nucleotide binding/ATPase protein (sugar) 110 58.22 0 121831..122706 - 291 15891814 - Atu3112 - ABC transporter, membrane spanning protein (sugar) 111 55.97 -1 122699..123586 - 295 159185609 - Atu3113 - ABC transporter, membrane spanning protein (sugar) 112 60.31 0 123659..124948 - 429 159185610 - Atu3114 - ABC transporter, substrate binding protein (sugar) 113 58.66 0 125066..125764 + 232 15891811 - Atu3115 - TetR family transcriptional regulator 114 60.07 0 126031..127152 + 373 159185611 - Atu3116 - oxidoreductase 59.48 MEAN 3.31 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.