version 1.0
Agrobacterium tumefaciens str. C58 chromosome linear, complete sequence - 1..2075577 1851 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 418 60.26 0 472801..473970 - 389 159185737 - Atu3426 - putative sulfonate monooxygenase 419 53.14 -1 474100..474417 + 105 17937135 - Atu3427 - hypothetical protein 420 59.22 0 474470..475087 - 205 15891507 - Atu3428 - hypothetical protein 421 60.85 0 475289..475477 + 62 15891506 - Atu3429 - hypothetical protein 422 62.37 0 475474..476544 + 356 15891505 - Atu3430 - alkanesulfonate monooxygenase 423 62.68 0 476602..477780 - 392 15891504 acd Atu3431 - acyl-CoA dehydrogenase 424 61.72 0 477777..478808 - 343 159185738 - Atu3432 - desulfurizing enzyme 425 57.71 0 478878..480485 - 535 159185739 - Atu3433 - ABC transporter, substrate binding protein (oligopeptide) 426 60.81 0 480755..481744 + 329 159185740 - Atu3434 - ABC transporter, membrane spanning protein (oligopeptide) 427 61.65 0 481741..482736 + 331 159185741 - Atu3435 - ABC transporter, membrane spanning protein (oligopeptide) 428 62.26 0 482733..483731 + 332 15891499 - Atu3436 - ABC transporter, nucleotide binding/ATPase protein (oligopeptide) 429 64.00 +1 483709..484644 + 311 15891498 - Atu3437 - ABC transporter, nucleotide binding/ATPase protein (oligopeptide) 430 62.78 +1 484663..485718 + 351 15891497 - Atu3438 - putative oxidoreductase 431 63.12 +1 485786..487024 + 412 159185742 acd Atu3439 - acyl-CoA dehydrogenase 432 62.14 0 487044..488015 + 323 15891495 - Atu3440 - LysR family transcriptional regulator 433 61.12 0 488032..489384 - 450 15891494 - Atu3441 - nitrilotriacetate monooxygenase 434 58.52 0 489440..491035 - 531 15891493 - Atu3442 - ABC transporter, substrate binding protein (oligopeptide) 435 57.33 0 491078..491527 + 149 159185743 - Atu3443 - hypothetical protein 436 57.29 0 491750..493381 - 543 159185744 - Atu3444 - ABC transporter, substrate binding protein (oligopeptide) 437 61.08 0 493374..494573 - 399 15891491 - Atu3445 - hippurate hydrolase 438 60.26 0 494667..495836 - 389 15891490 - Atu3446 - monooxygenase 439 62.30 0 495827..496720 - 297 15891489 - Atu3447 - hypothetical protein 440 62.20 0 496728..497780 - 350 15891488 - Atu3448 - putative dibenzothiophene desulfurization enzyme B 441 61.09 0 498128..499435 + 435 15891487 - Atu3450 - nitrilotriacetate monooxygenase 442 60.06 0 499522..500550 - 342 15891486 - Atu3451 - monooxygenase 443 60.57 0 500975..502123 + 382 159185745 - Atu3453 - isomerase/lactonizing enzyme 444 67.94 +2 502130..502759 + 209 15891484 - Atu3454 - arylesterase 445 58.47 0 502841..504439 + 532 159185746 - Atu3455 - ABC transporter, substrate binding protein (oligopeptide) 446 61.26 0 504657..505415 - 252 159185747 - Atu3456 - ABC transporter, nucleotide binding/ATPase protein 447 60.22 0 505415..506251 - 278 15891481 - Atu3457 - ABC transporter, nucleotide binding/ATPase protein 448 61.15 0 506256..507143 - 295 15891480 - Atu3458 - ABC transporter, membrane spanning protein 449 58.26 0 507143..508165 - 340 159185748 - Atu3459 - ABC transporter, membrane spanning protein 450 60.35 0 508469..509101 + 210 159185749 - Atu3460 - RhtB family transporter 451 61.04 0 509129..509857 - 242 15891477 - Atu3461 - GntR family transcriptional regulator 452 62.80 +1 509952..510935 - 327 15891476 - Atu3462 - AraC family transcriptional regulator 453 59.54 0 511064..511891 + 275 15891475 cpoF Atu3463 - non-heme chloroperoxidase 454 63.13 +1 511918..512709 + 263 15891474 - Atu3464 - dehydrogenase 455 58.02 0 512723..513208 + 161 159186362 - Atu8032 - hypothetical protein 456 60.26 0 513471..514766 + 431 15891472 - Atu3465 - metallo-beta-lactamase superfamily protein 457 60.17 0 514760..515113 + 117 15891471 - Atu3466 - ArsR family transcriptional regulator 458 61.87 0 515143..515517 + 124 159185750 - Atu3467 - hypothetical protein 459 62.10 0 515514..515951 + 145 159185751 - Atu3468 - hypothetical protein 460 61.07 0 516026..517543 - 505 15891468 pgm Atu3469 - phosphoglyceromutase 461 57.44 0 517516..517710 - 64 159185752 - Atu3470 - hypothetical protein 462 61.74 0 517905..519182 - 425 159185753 bkdB Atu3471 - branched-chain alpha-keto acid dehydrogenase subunit E2 463 60.65 0 519185..520198 - 337 15891465 bkdA2 Atu3472 - 2-oxoisovalerate dehydrogenase beta subunit 464 60.61 0 520202..521440 - 412 159185754 bkdA1 Atu3473 - 2-oxoisovalerate dehydrogenase alpha subunit 465 62.41 0 521485..522612 - 375 159185755 mmgC Atu3474 - acyl-CoA dehydrogenase 466 62.15 0 522624..523862 - 412 159185756 - Atu3475 - acetyl-CoA C-acetyltransferase 467 58.23 0 523971..524444 + 157 15891461 - Atu3476 - AsnC family transcriptional regulator 468 60.70 0 524524..525696 + 390 159185757 acd Atu3477 - acyl-CoA dehydrogenase 469 59.80 0 525705..527306 + 533 159185758 mccB Atu3478 - 3-methylcrotonoyl-CoA carboxylase beta subunit 470 61.50 0 527314..529305 + 663 159185759 mccA Atu3479 - 3-methylcrotonyl-CoA carboxylase alpha subunit 471 62.24 0 529307..530233 + 308 159185760 hmgL Atu3480 - hydroxymethylglutaryl-CoA lyase 472 63.84 +1 530223..530999 + 258 159185761 - Atu3481 - enoyl-CoA hydratase 473 62.46 0 531140..532018 + 292 159185762 panC Atu3482 - pantoate--beta-alanine ligase 474 62.38 0 532015..532854 + 279 15891454 panB Atu3483 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 475 59.47 0 532889..534181 - 430 159185763 - Atu3484 - hypothetical protein 476 58.94 0 534232..536328 - 698 159185764 - Atu3485 - short chain dehydrogenase 477 57.76 0 536529..537359 + 276 15891451 - Atu3486 - DeoR family transcriptional regulator 478 60.63 0 537407..538417 + 336 159185765 - Atu3487 - ABC transporter, substrate binding protein (sugar) 479 59.95 0 538644..540176 + 510 159185766 - Atu3488 - ABC transporter, nucleotide binding/ATPase protein 480 62.87 +1 540191..541192 + 333 15891448 - Atu3489 - ABC transporter, membrane spanning protein 481 61.13 0 541189..542199 + 336 159185767 - Atu3490 - ABC transporter, membrane spanning protein 482 54.63 -1 542203..542526 + 107 15891446 - Atu3491 - hypothetical protein 483 61.17 0 542523..543905 + 460 15891445 - Atu3492 - sugar kinase 484 60.10 0 543958..544794 - 278 15891444 - Atu3493 - non-heme haloperoxidase 485 59.48 0 545112..545807 - 231 15891443 - Atu3494 - hypothetical protein 486 59.33 0 545969..547903 - 644 15891442 - Atu3495 - GGDEF family protein 487 53.45 -1 547913..548419 - 168 15891441 - Atu3496 - hypothetical protein 488 57.18 0 548600..548947 - 115 159185768 - Atu3497 - hypothetical protein 489 62.21 0 549017..550453 + 478 159185769 - Atu3498 - aldehyde dehydrogenase 490 58.18 0 550981..551793 + 270 15891438 - Atu3500 - hypothetical protein 491 60.53 0 551809..552834 - 341 15891437 - Atu3501 - ABC transporter, nucleotide binding/ATPase protein 492 61.26 0 552840..553727 - 295 15891436 - Atu3502 - ABC transporter, membrane spanning protein 493 60.79 0 553731..554564 - 277 159185770 - Atu3503 - ABC transporter, membrane spanning protein 494 57.65 0 554626..555612 - 328 159185771 - Atu3504 - ABC transporter, substrate binding protein (sulfate) 495 60.49 0 555782..556834 - 350 159185772 - Atu3505 - enoyl-CoA hydratase 496 54.73 -1 556991..557392 + 133 159185773 - Atu3506 - hypothetical protein 497 62.82 +1 557462..558241 - 259 159185774 - Atu3507 - hypothetical protein 498 62.42 0 558539..559291 + 250 15891430 ubiG Atu3508 - 3-demethylubiquinone-9 3-methyltransferase 499 60.37 0 559377..559805 - 142 15891429 - Atu3509 - hypothetical protein 500 61.21 0 559802..560662 - 286 159185775 - Atu3510 - amidohydrolase 501 56.44 0 560687..560989 - 100 15891427 grx Atu3511 - glutaredoxin 502 65.03 +1 561002..561793 - 263 159185776 comF Atu3512 - competence protein F 503 61.90 0 561936..562817 + 293 159185777 - Atu3513 - methyltransferase 504 51.39 -2 562835..563050 - 71 17937222 pilA Atu3514 - fimbriae associated protein 505 58.41 0 563122..563436 - 104 159185778 - Atu3515 - hypothetical protein 506 60.14 0 563609..564022 - 137 15891423 - Atu3516 - MutT family NTP pyrophosphatase 507 59.20 0 564019..564795 - 258 159185779 - Atu3517 - acetyltransferase 508 61.67 0 564814..566055 - 413 15891421 argJ Atu3518 - bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 509 56.63 0 566148..567014 - 288 159185780 ppiD Atu3519 - peptidyl-prolyl cis-trans isomerase 510 60.87 0 567257..569965 + 902 159185781 secA Atu3520 - preprotein translocase subunit SecA 511 60.18 0 570113..571006 + 297 15891418 - Atu3521 - permease 512 58.60 0 571088..572290 + 400 159185782 - Atu3522 - glucans biosynthesis protein 513 57.91 0 572347..573762 + 471 159185783 - Atu3523 - polysaccharide biosynthesis associated protein 514 60.77 0 573771..575042 + 423 159186373 - Atu8188 - hypothetical protein 515 61.54 0 575095..575757 - 220 15891414 - Atu3525 - hypothetical protein 516 61.45 0 576261..577103 - 280 159185784 - Atu3527 - hypothetical protein 517 60.51 0 577129..578118 - 329 15891412 - Atu3528 - oxidoreductase 59.48 MEAN 3.31 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.