version 1.0
Agrobacterium tumefaciens str. C58 chromosome linear, complete sequence - 1..2075577 1851 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 302 64.33 +1 340535..341434 - 299 15891625 - Atu8187 - hypothetical protein 303 62.87 +1 341868..343052 + 394 15891624 - Atu3311 - phosphomannose isomerase 304 59.40 0 343105..344067 - 320 15891623 - Atu3312 - hypothetical protein 305 59.13 0 344081..344584 - 167 159185687 - Atu3313 - hypothetical protein 306 61.25 0 344599..346536 - 645 15891621 - Atu3314 - cellulose synthase 307 61.18 0 346533..347516 - 327 159185688 galE Atu3315 - UDP-glucose 4-epimerase 308 57.18 0 347518..348540 - 340 15891619 - Atu3316 - dTDP-glucose 4-6-dehydratase 309 57.83 0 348935..349285 + 116 15891618 - Atu3317 - hypothetical protein 310 53.83 -1 349345..350115 - 256 159185689 - Atu3318 - LuxR family transcriptional regulator 311 50.41 -2 350386..350631 + 81 159185690 - Atu3319 - hypothetical protein 312 55.59 -1 351017..351982 + 321 15891615 - Atu3320 - fibrinogen binding protein 313 56.68 0 352131..354152 + 673 159185691 - Atu3321 - hypothetical protein 314 59.54 0 354773..356428 + 551 159185692 - Atu3322 - ABC transporter, nucleotide binding/ATPase protein 315 58.79 0 356437..357795 + 452 159185693 - Atu3323 - HlyD family secretion protein 316 53.94 -1 357879..358373 + 164 159185694 - Atu3324 - hypothetical protein 317 57.60 0 358370..359638 - 422 15891610 exoQ Atu3325 - exopolysaccharide production protein 318 60.94 0 359646..360902 - 418 15891609 exoF Atu3326 - exopolysaccharide production protein 319 56.98 0 361096..361776 - 226 159185695 exoY Atu3327 - succinoglycan exopolysaccharide synthesis protein 320 53.55 -1 362198..362380 - 60 15891607 - Atu8030 - hypothetical protein 321 59.56 0 362396..362944 - 182 15891606 - Atu3328 - aldehyde dehydrogenase-like protein 322 61.80 0 363091..364425 + 444 15891605 bioA Atu3329 - beta alanine--pyruvate transaminase 323 57.87 0 364570..366387 + 605 159185696 mclA Atu3330 - methyl-accepting chemotaxis protein 324 63.49 +1 366526..367311 - 261 15891603 - Atu3331 - hypothetical protein 325 60.59 0 367331..368317 - 328 159185697 - Atu3332 - hypothetical protein 326 63.36 +1 368557..369342 - 261 15891601 - Atu3333 - 3-ketoacyl-(acyl-carrier-protein) reductase 327 60.68 0 369339..369572 - 77 159185698 - Atu3334 - hypothetical protein 328 60.82 0 369819..370400 + 193 159185699 - Atu3335 - 3-methyladenine DNA glycosylase 329 62.89 +1 370442..370600 - 52 15891598 - Atu8031 - hypothetical protein 330 55.05 -1 370824..371021 - 65 15891597 - Atu3336 - hypothetical protein 331 60.65 0 371196..372209 - 337 15891596 thuR Atu3337 - LacI family transcription regulator 332 58.29 0 372478..373743 + 421 159185700 thuE Atu3338 - ABC transporter, substrate binding protein (trehalose/maltose) 333 59.69 0 373807..374781 + 324 15891594 thuF Atu3339 - ABC transporter, membrane spanning protein (trehalose/maltose) 334 60.19 0 374778..375611 + 277 159185701 thuG Atu3340 - ABC transporter, membrane spanning protein (trehalose/maltose) 335 62.78 0 375622..376650 + 342 15891592 thuK Atu3341 - ABC transporter, nucleotide binding/ATPase protein (trehalose/maltose) 336 60.05 0 376708..377493 + 261 159185702 thuA Atu3342 - trehalose utilization-related protein 337 60.76 0 377500..378549 + 349 15891590 ThuB Atu3343 - trehalose utilization-related protein 338 60.85 0 378583..379338 - 251 15891589 exsD Atu3344 - radical activating protein 339 56.02 -1 379335..379691 - 118 15891588 exsC Atu3345 - 6-pyruvoyl tetrahydropterin synthase 340 61.04 0 379691..380401 - 236 15891587 exsB Atu3346 - succinoglycan biosynthesis regulator 341 60.76 0 380545..381678 - 377 15891586 - Atu3347 - hypothetical protein 342 58.43 0 381702..382466 - 254 159185703 - Atu3348 - hypothetical protein 343 59.60 0 382523..383611 - 362 159185704 - Atu3349 - ABC transporter, nucleotide binding/ATPase protein 344 56.48 0 383617..384558 - 313 159185705 - Atu3350 - ABC transporter, membrane spanning protein 345 56.37 0 384551..385453 - 300 15891582 - Atu3351 - ABC transporter, membrane spanning protein (sugar) 346 60.50 0 385597..386829 - 410 15891581 - Atu3352 - ABC transporter, substrate binding protein (sugar) 347 59.12 0 387134..388564 - 476 15891580 manC Atu3353 - mannose-1-phosphate guanylyltransferase (GDP) 348 62.89 +1 388845..391253 - 802 159185706 - Atu3354 - pyrroloquinoline-quinone-dependent quinate dehydrogenase 349 61.56 0 391676..392575 + 299 159185707 - Atu3355 - LysR family transcriptional regulator 350 61.64 0 392736..395024 + 762 15891577 - Atu3356 - malic enzyme 351 60.71 0 395279..396118 + 279 159185708 - Atu3357 - ABC transporter, substrate binding protein (amino acid) 352 58.93 0 396414..397046 + 210 159185709 - Atu3358 - ABC transporter, membrane spanning protein (amino acid) 353 60.03 0 397043..397825 + 260 15891574 - Atu3359 - ABC transporter, membrane spanning protein (amino acid) 354 60.66 0 397838..398653 + 271 159185710 - Atu3360 - ABC transporter, nucleotide binding/ATPase protein (amino acid) 355 62.88 +1 398658..400004 + 448 15891572 - Atu3361 - hypothetical protein 356 62.55 0 400031..401341 + 436 15891571 - Atu3362 - monooxygenase 357 57.51 0 401420..403156 - 578 15891570 - Atu3363 - sensory methylation accepting chemotaxis protein 358 63.16 +1 403471..404724 + 417 15891569 - Atu3364 - D-amino acid dehydrogenase 359 57.58 0 404740..405300 - 186 159185711 - Atu3365 - hypothetical protein 360 56.10 -1 405343..405588 - 81 159186369 - Atu8094 - hypothetical protein 361 55.93 -1 405983..406522 + 179 159185712 - Atu3366 - tripartite ATP-independent periplasmic transporter DctQ 362 60.00 0 406555..408024 + 489 15891565 - Atu3367 - TRAP dicarboxylate transporter, DctM subunit 363 56.56 0 408413..409510 - 365 15891564 - Atu3368 - periplasmic mannitol-binding protein 364 63.10 +1 409815..410570 + 251 15891563 - Atu3369 - hypothetical protein 365 59.57 0 410653..411681 - 342 159185713 - Atu3370 - ABC transporter, membrane spanning protein (sugar) 366 57.85 0 411714..413255 - 513 159185714 - Atu3371 - ABC transporter, nucleotide binding/ATPase protein (sugar) 367 58.82 0 413489..414418 - 309 15891560 - Atu3372 - ABC transporter, substrate binding protein (sugar) 368 59.39 0 414936..416378 - 480 159185715 - Atu3374 - amidohydrolase 369 58.81 0 416506..418083 - 525 15891557 - Atu3375 - ABC transporter, substrate binding protein (peptide) 370 59.60 0 418080..418928 - 282 159185716 - Atu3376 - beta-lactamase 371 61.65 0 418936..420570 - 544 15891555 - Atu3377 - ABC transporter, nucleotide binding/ATPase protein (peptide) 372 63.00 +1 420567..421385 - 272 15891554 - Atu3378 - ABC transporter, membrane spanning protein (oligopeptide) 373 60.00 0 421382..422326 - 314 15891553 dppB Atu3379 - ABC transporter, membrane spanning protein (peptide) 374 58.72 0 422507..423412 - 301 159185717 - Atu3381 - LysR family transcriptional regulator 375 61.04 0 423621..424934 - 437 159185718 prsE2 Atu3382 - HlyD family secretion protein 376 61.74 0 424921..426768 - 615 15891550 prsD Atu3383 - rhizobicin secretion 377 60.05 0 426783..427538 - 251 15891549 - Atu3384 - hypothetical protein 378 58.59 0 427642..430413 - 923 159185719 hasR Atu3385 - heme receptor 379 61.45 0 430563..431558 - 331 15891547 - Atu3386 - two component sensor kinase 380 56.29 0 431670..432170 - 166 15891546 pfrI Atu3387 - sigma factor 381 61.89 0 432382..433134 - 250 15891545 fecE Atu3388 - ABC transporter, nucleotide binding/ATPase protein (iron) 382 61.52 0 433128..434195 - 355 15891544 - Atu3389 - ABC transporter, membrane spanning protein (iron) 383 58.68 0 434192..435331 - 379 15891543 - Atu3390 - ABC transporter, substrate binding protein (iron) 384 56.44 0 435428..436561 - 377 15891542 - Atu3391 - ABC transporter, substrate binding protein (iron) 385 59.76 0 436675..437499 + 274 15891541 - Atu3392 - methyltransferase 386 58.73 0 437676..438116 - 146 15891540 - Atu3393 - pseudoazurin 387 63.05 +1 438113..438913 - 266 15891539 fecE Atu3394 - ABC transporter, nucleotide binding/ATPase protein (iron) 388 63.31 +1 438910..439863 - 317 159185720 - Atu3395 - ABC transporter, membrane spanning protein (iron (III)) 389 60.47 0 439935..440966 - 343 15891537 - Atu3396 - ABC transporter, substrate binding protein (iron) 390 59.82 0 441410..442285 - 291 159185721 - Atu3397 - hypothetical protein 391 63.11 +1 442488..443612 + 374 15891535 argE Atu3398 - acetylornithine deacetylase 392 62.88 +1 443635..444558 + 307 159185722 - Atu3399 - 2-hydroxyacid dehydrogenase 393 56.58 0 444587..444943 + 118 15891533 - Atu3400 - hypothetical protein 394 63.05 +1 445133..446596 + 487 159185723 - Atu3401 - aldehyde dehydrogenase 395 62.36 0 446610..447653 + 347 159185724 - Atu3402 - 3-isopropylmalate dehydrogenase 396 62.48 0 447669..449126 + 485 159185725 attK2 Atu3403 - succinate semialdehyde dehydrogenase 397 60.08 0 449217..450491 - 424 15891529 ordL Atu3404 - oxidoreductase 398 55.16 -1 450507..451175 - 222 159185726 hadL Atu3405 - haloalkanoic acid dehalogenase 399 60.69 0 451499..452335 + 278 159185727 - Atu3406 - hypothetical protein 400 62.52 0 452350..453723 + 457 15891526 - Atu3407 - hypothetical protein 401 58.51 0 453848..454693 + 281 15891525 hadL Atu3408 - 2-haloalkanoic acid dehalogenase 59.48 MEAN 3.31 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.