version 1.0
Agrobacterium tumefaciens str. C58 chromosome linear, complete sequence - 1..2075577 1851 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 253 64.35 +1 275818..277329 + 503 159185661 - Atu3259 - dehydrogenase 254 58.86 0 277383..278381 - 332 159185662 - Atu3260 - ABC transporter, substrate binding protein 255 62.49 0 278398..280218 - 606 159185663 - Atu3261 - ABC transporter, membrane spanning protein 256 60.89 0 280319..282154 - 611 15891671 - Atu3262 - ABC transporter, nucleotide binding/ATPase protein 257 61.90 0 282210..283406 - 398 159185664 selA Atu3263 - L-seryl-tRNA(Ser) selenium transferase 258 61.38 0 283481..284332 + 283 15891669 - Atu3264 - IclR family transcriptional regulator 259 61.28 0 284339..284821 - 160 159185665 - Atu3265 - hypothetical protein 260 59.31 0 284917..286140 - 407 159185666 - Atu3266 - dihydroorotase 261 60.73 0 286142..287017 - 291 15891666 - Atu3267 - ABC transporter, membrane spanning protein (dipeptide) 262 60.29 0 287017..287925 - 302 159185667 - Atu3268 - ABC transporter, membrane spanning protein (dipeptide) 263 59.20 0 288288..289814 - 508 159185668 - Atu3269 - ABC transporter, substrate binding protein (dipeptide) 264 49.79 -2 289874..290116 - 80 15891663 - Atu3270 - hypothetical protein 265 58.13 0 290253..291377 + 374 159185669 - Atu3271 - glycosyltransferase 266 59.57 0 291854..293050 + 398 159185670 pssN Atu3272 - exopolysaccharide export protein 267 61.50 0 293317..294594 + 425 159185671 - Atu3273 - HlyD family secretion protein 268 59.85 0 294591..297731 + 1046 15891659 - Atu3274 - AcrB/AcrD/AcrF family protein 269 60.79 0 297728..298306 - 192 15891658 ialB Atu3275 - invasion associated protein B 270 60.78 0 298306..302331 - 1341 15891657 - Atu3276 - hypothetical protein 271 60.95 0 302505..303029 - 174 159185672 - Atu3277 - nitrilotriacetate monooxygenase 272 61.63 0 303029..303922 - 297 15891655 - Atu3278 - aryl-alcohol dehydrogenase 273 61.40 0 303922..305079 - 385 15891654 - Atu3279 - methanesulfonate sulfonatase 274 61.99 0 305181..305885 + 234 15891653 - Atu3280 - GntR family transcriptional regulator 275 62.77 0 306220..307296 + 358 159185673 - Atu3281 - ABC transporter, nucleotide binding/ATPase protein 276 57.95 0 307348..308598 + 416 15891651 - Atu3282 - ABC transporter, substrate binding protein (sugar) 277 58.58 0 308758..309684 + 308 159185674 malF Atu3283 - ABC transporter, membrane spanning protein (sugar) 278 60.84 0 309689..310546 + 285 159185675 malG Atu3284 - ABC transporter, membrane spanning protein (sugar) 279 60.40 0 310558..312552 + 664 15891648 - Atu3285 - alpha-glucosidase 280 63.61 +1 313002..313787 + 261 15891647 - Atu3286 - ABC transporter, membrane spanning protein 281 60.09 0 313838..314734 + 298 159185676 - Atu3287 - thiamine biosynthesis associated protein 282 60.05 0 314731..315471 + 246 15891645 - Atu3288 - hydroxyethylthiazole kinase 283 63.80 +1 315458..316120 + 220 159185677 - Atu3289 - thiamine-phosphate pyrophosphorylase 284 64.54 +1 316117..316914 + 265 15891643 thiD Atu3290 - phosphomethylpyrimidine kinase 285 59.04 0 317131..317589 - 152 159185678 - Atu3291 - Lpr family transcriptional regulator 286 62.13 0 317717..318883 + 388 15891641 alr Atu3292 - alanine racemase 287 63.09 +1 318891..320147 + 418 15891640 dadA Atu3293 - D-amino acid dehydrogenase small subunit 288 62.87 +1 320197..320907 - 236 159185679 - Atu3294 - GntR family transcriptional regulator 289 62.96 +1 321087..321599 + 170 159185680 - Atu3295 - hypothetical protein 290 60.81 0 321688..323052 - 454 15891637 dctD Atu3296 - two component response regulator for C4-dicarboxylate transport 291 60.74 0 323054..324436 - 460 159185681 dctB Atu3297 - two component sensor kinase for C4-dicarboxylate transport 292 60.80 0 325132..326478 + 448 15891635 dctA Atu3298 - C4-dicarboxylate transporter DctA 293 59.82 0 326656..327093 + 145 159185682 - Atu3299 - hypothetical protein 294 59.42 0 327135..328487 - 450 15891633 - Atu3300 - aminotransferase 295 62.78 0 328525..329244 - 239 159185683 fixR Atu3301 - short-chain alcohol dehydrogenase 296 60.90 0 329494..331140 + 548 159185684 celD Atu3302 - cellulose biosynthesis protein 297 60.00 0 331201..332355 + 384 159185685 celE Atu3303 - cellulose synthesis protein 298 63.55 +1 332380..334626 - 748 159186372 celG Atu8186 - cellulose synthesis protein 299 60.61 0 334719..335774 - 351 15891628 celC Atu3307 - endoglucanase 300 61.55 0 335771..338254 - 827 159185686 celB Atu3308 - celB protein 301 59.86 0 338251..340440 - 729 15891626 celA Atu3309 - cellulose synthase 302 64.33 +1 340535..341434 - 299 15891625 - Atu8187 - hypothetical protein 303 62.87 +1 341868..343052 + 394 15891624 - Atu3311 - phosphomannose isomerase 304 59.40 0 343105..344067 - 320 15891623 - Atu3312 - hypothetical protein 305 59.13 0 344081..344584 - 167 159185687 - Atu3313 - hypothetical protein 306 61.25 0 344599..346536 - 645 15891621 - Atu3314 - cellulose synthase 307 61.18 0 346533..347516 - 327 159185688 galE Atu3315 - UDP-glucose 4-epimerase 308 57.18 0 347518..348540 - 340 15891619 - Atu3316 - dTDP-glucose 4-6-dehydratase 309 57.83 0 348935..349285 + 116 15891618 - Atu3317 - hypothetical protein 310 53.83 -1 349345..350115 - 256 159185689 - Atu3318 - LuxR family transcriptional regulator 311 50.41 -2 350386..350631 + 81 159185690 - Atu3319 - hypothetical protein 312 55.59 -1 351017..351982 + 321 15891615 - Atu3320 - fibrinogen binding protein 313 56.68 0 352131..354152 + 673 159185691 - Atu3321 - hypothetical protein 314 59.54 0 354773..356428 + 551 159185692 - Atu3322 - ABC transporter, nucleotide binding/ATPase protein 315 58.79 0 356437..357795 + 452 159185693 - Atu3323 - HlyD family secretion protein 316 53.94 -1 357879..358373 + 164 159185694 - Atu3324 - hypothetical protein 317 57.60 0 358370..359638 - 422 15891610 exoQ Atu3325 - exopolysaccharide production protein 318 60.94 0 359646..360902 - 418 15891609 exoF Atu3326 - exopolysaccharide production protein 319 56.98 0 361096..361776 - 226 159185695 exoY Atu3327 - succinoglycan exopolysaccharide synthesis protein 320 53.55 -1 362198..362380 - 60 15891607 - Atu8030 - hypothetical protein 321 59.56 0 362396..362944 - 182 15891606 - Atu3328 - aldehyde dehydrogenase-like protein 322 61.80 0 363091..364425 + 444 15891605 bioA Atu3329 - beta alanine--pyruvate transaminase 323 57.87 0 364570..366387 + 605 159185696 mclA Atu3330 - methyl-accepting chemotaxis protein 324 63.49 +1 366526..367311 - 261 15891603 - Atu3331 - hypothetical protein 325 60.59 0 367331..368317 - 328 159185697 - Atu3332 - hypothetical protein 326 63.36 +1 368557..369342 - 261 15891601 - Atu3333 - 3-ketoacyl-(acyl-carrier-protein) reductase 327 60.68 0 369339..369572 - 77 159185698 - Atu3334 - hypothetical protein 328 60.82 0 369819..370400 + 193 159185699 - Atu3335 - 3-methyladenine DNA glycosylase 329 62.89 +1 370442..370600 - 52 15891598 - Atu8031 - hypothetical protein 330 55.05 -1 370824..371021 - 65 15891597 - Atu3336 - hypothetical protein 331 60.65 0 371196..372209 - 337 15891596 thuR Atu3337 - LacI family transcription regulator 332 58.29 0 372478..373743 + 421 159185700 thuE Atu3338 - ABC transporter, substrate binding protein (trehalose/maltose) 333 59.69 0 373807..374781 + 324 15891594 thuF Atu3339 - ABC transporter, membrane spanning protein (trehalose/maltose) 334 60.19 0 374778..375611 + 277 159185701 thuG Atu3340 - ABC transporter, membrane spanning protein (trehalose/maltose) 335 62.78 0 375622..376650 + 342 15891592 thuK Atu3341 - ABC transporter, nucleotide binding/ATPase protein (trehalose/maltose) 336 60.05 0 376708..377493 + 261 159185702 thuA Atu3342 - trehalose utilization-related protein 337 60.76 0 377500..378549 + 349 15891590 ThuB Atu3343 - trehalose utilization-related protein 338 60.85 0 378583..379338 - 251 15891589 exsD Atu3344 - radical activating protein 339 56.02 -1 379335..379691 - 118 15891588 exsC Atu3345 - 6-pyruvoyl tetrahydropterin synthase 340 61.04 0 379691..380401 - 236 15891587 exsB Atu3346 - succinoglycan biosynthesis regulator 341 60.76 0 380545..381678 - 377 15891586 - Atu3347 - hypothetical protein 342 58.43 0 381702..382466 - 254 159185703 - Atu3348 - hypothetical protein 343 59.60 0 382523..383611 - 362 159185704 - Atu3349 - ABC transporter, nucleotide binding/ATPase protein 344 56.48 0 383617..384558 - 313 159185705 - Atu3350 - ABC transporter, membrane spanning protein 345 56.37 0 384551..385453 - 300 15891582 - Atu3351 - ABC transporter, membrane spanning protein (sugar) 346 60.50 0 385597..386829 - 410 15891581 - Atu3352 - ABC transporter, substrate binding protein (sugar) 347 59.12 0 387134..388564 - 476 15891580 manC Atu3353 - mannose-1-phosphate guanylyltransferase (GDP) 348 62.89 +1 388845..391253 - 802 159185706 - Atu3354 - pyrroloquinoline-quinone-dependent quinate dehydrogenase 349 61.56 0 391676..392575 + 299 159185707 - Atu3355 - LysR family transcriptional regulator 350 61.64 0 392736..395024 + 762 15891577 - Atu3356 - malic enzyme 351 60.71 0 395279..396118 + 279 159185708 - Atu3357 - ABC transporter, substrate binding protein (amino acid) 352 58.93 0 396414..397046 + 210 159185709 - Atu3358 - ABC transporter, membrane spanning protein (amino acid) 59.48 MEAN 3.31 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0