version 1.0
Agrobacterium tumefaciens str. C58 chromosome linear, complete sequence - 1..2075577 1851 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 182 58.71 0 194587..195906 + 439 15891744 ugpB Atu3185 - ABC transporter, substrate binding protein (glycerol-3-phosphate) 183 57.94 0 195977..196858 + 293 159185641 ugpA Atu3186 - ABC transporter, membrane spanning protein (glycerol-3-phosphate) 184 56.42 0 196868..197716 + 282 15891742 ugpE Atu3187 - ABC transporter, membrane spanning protein (glycerol-3-phosphate) 185 62.34 0 197716..198777 + 353 15891741 ugpC Atu3188 - glycerol-3-phosphate transporter ATP-binding subunit 186 52.82 -2 198838..199581 - 247 15891740 - Atu3189 - hypothetical protein 187 59.91 0 199903..200346 - 147 15891739 - Atu3190 - hypothetical protein 188 58.95 0 200556..201242 - 228 15891738 - Atu3191 - outer membrane protein 189 61.88 0 201516..202811 - 431 159185642 - Atu3192 - MFS permease 190 63.43 +1 202881..203282 - 133 15891736 - Atu3193 - MarR family transcriptional regulator 191 63.68 +1 203429..203998 - 189 15891735 - Atu3194 - acetyltransferase 192 60.23 0 204249..205382 - 377 159185643 speF Atu3196 - ornithine decarboxylase 193 59.62 0 205919..206812 + 297 159185644 ptxR Atu3197 - LysR family transcriptional regulator 194 60.27 0 206885..207838 - 317 159185645 - Atu3198 - ABC transporter, substrate binding protein (ribose) 195 61.88 0 207911..208912 - 333 159185646 - Atu3199 - ABC transporter, membrane spanning protein (ribose) 196 62.47 0 208965..210488 - 507 15891730 - Atu3200 - ABC transporter, nucleotide binding/ATPase protein (ribose) 197 57.69 0 210682..211305 - 207 159185647 acrR Atu3201 - TetR family transcriptional regulator 198 60.61 0 211435..214569 - 1044 15891728 - Atu3202 - RND multidrug efflux transporter 199 65.27 +1 214582..215796 - 404 159185648 - Atu3203 - RND multidrug efflux membrane permease 200 59.25 0 216138..217715 - 525 15891726 - Atu3204 - GGDEF family protein 201 60.38 0 217813..218607 - 264 159185649 - Atu3205 - hypothetical protein 202 57.76 0 218729..219772 - 347 159185650 - Atu3206 - hypothetical protein 203 57.89 0 220091..222085 + 664 159185651 - Atu3207 - GGDEF family protein 204 64.28 +1 222123..223169 - 348 159185652 - Atu3208 - putative malate dehydrogenase 205 62.50 0 223481..226213 - 910 15891721 - Atu3210 - putative ftsk cell division protein 206 61.19 0 226501..228198 + 565 15891720 - Atu3212 - ABC transporter, substrate binding protein (oligopeptide) 207 63.54 +1 228208..229197 + 329 15891719 - Atu3213 - ABC transporter, membrane spanning protein (oligopeptide) 208 65.34 +1 229194..230024 + 276 15891718 - Atu3214 - ABC transporter, membrane spanning protein (oligopeptide) 209 63.56 +1 230021..230824 + 267 15891717 - Atu3215 - ABC transporter, nucleotide binding/ATPase protein (oligopeptide) 210 61.83 0 230821..231606 + 261 15891716 - Atu3216 - ABC transporter, nucleotide binding/ATPase protein (oligopeptide) 211 66.13 +2 231610..232728 + 372 15891715 aspC Atu3217 - aspartate aminotransferase 212 53.62 -1 232854..233129 - 91 17936929 - Atu3218 - hypothetical protein 213 48.84 -2 233299..233427 + 42 159186361 - Atu8029 - hypothetical protein 214 61.70 0 233509..235320 - 603 15891713 ilvD Atu3219 - dihydroxy-acid dehydratase 215 35.45 -2 235564..235752 + 62 15891711 - Atu3221 - hypothetical protein 216 56.98 0 235845..236804 + 319 15891710 - Atu3222 - ABC transporter, substrate binding protein (ribose) 217 59.91 0 236874..238397 + 507 15891709 - Atu3223 - ABC transporter, nucleotide binding/ATPase protein (ribose) 218 62.56 0 238394..239440 + 348 15891708 - Atu3224 - ABC transporter, membrane spanning protein (ribose) 219 59.84 0 239437..240417 + 326 15891707 - Atu3225 - inner membrane ABC transporter permease protein YjfF 220 62.18 0 240435..241169 + 244 15891706 - Atu3226 - GntR family transcriptional regulator 221 61.87 0 241387..242325 + 312 159185653 - Atu3227 - AraC family transcriptional regulator 222 58.30 0 242333..245608 - 1091 15891704 dnaE Atu3228 - DNA polymerase III, alpha chain 223 66.46 +2 245605..247023 - 472 15891703 - Atu3229 - hypothetical protein 224 64.44 +1 247037..247801 - 254 15891702 - Atu3230 - hypothetical protein 225 57.49 0 247959..248372 + 137 15891701 - Atu8184 - hypothetical protein 226 62.92 +1 248369..249649 + 426 15891700 - Atu3232 - hydroxypyruvate reductase 227 57.95 0 249754..250017 + 87 15891699 - Atu8185 - hypothetical protein 228 61.03 0 250129..251316 - 395 15891698 - Atu3234 - NAD binding oxidoreductase 229 59.26 0 251338..252390 - 350 159185654 - Atu3235 - hypothetical protein 230 61.45 0 252535..253608 - 357 15891696 - Atu3236 - ABC transporter, nucleotide binding/ATPase protein (sugar) 231 57.83 0 253626..254474 - 282 15891695 - Atu3237 - ABC transporter, membrane spanning protein (sugar) 232 58.09 0 254467..255399 - 310 159185655 - Atu3238 - ABC transporter, membrane spanning protein (sugar) 233 61.14 0 255471..256772 - 433 15891693 - Atu3239 - ABC transporter, substrate binding protein (sugar) 234 63.00 +1 256967..258166 + 399 159185656 - Atu3240 - ROK family transcriptional regulator 235 59.85 0 258219..259319 + 366 159185657 - Atu3241 - dehydrogenase 236 57.94 0 259337..259978 + 213 15891690 - Atu3242 - hypothetical protein 237 61.82 0 260020..261381 - 453 159185658 gatA Atu3243 - hypothetical protein 238 58.56 0 261692..264010 + 772 15891688 - Atu3244 - GGDEF family protein 239 55.15 -1 264041..264934 + 297 15891687 - Atu3245 - ABC transporter, substrate binding protein (amino acid) 240 57.70 0 265006..265908 + 300 15891686 - Atu3246 - ABC transporter, substrate binding protein (amino acid) 241 54.79 -1 265951..266211 - 86 15891685 minE Atu3247 - cell division topological specificity factor MinE 242 62.25 0 266208..267023 - 271 15891684 minD Atu3248 - cell division inhibitor 243 62.92 +1 267059..267778 - 239 159185659 minC Atu3249 - septum formation inhibitor 244 51.44 -2 267841..268083 - 80 17936961 - Atu3250 - hypothetical protein 245 62.30 0 268197..268883 + 228 15891682 - Atu3251 - haloacid dehalogenase-like hydrolase 246 61.65 0 269049..269765 + 238 15891681 exuR Atu3252 - GntR family transcriptional regulator 247 55.49 -1 269828..270802 + 324 15891680 - Atu3253 - ABC transporter, substrate binding protein 248 56.02 -1 270863..271435 + 190 15891679 - Atu3254 - ABC transporter, nucleotide binding/ATPase protein (dicarboxylate) 249 59.30 0 271503..272846 + 447 159185660 - Atu3255 - ABC transporter, membrane spanning protein (dicarboxylate) 250 64.18 +1 272922..273968 + 348 15891677 - Atu3256 - zinc-binding dehydrogenase 251 61.62 0 273985..275193 + 402 15891676 uxuA Atu3257 - mannonate dehydratase 252 58.39 0 275221..275643 - 140 15891675 - Atu3258 - hypothetical protein 253 64.35 +1 275818..277329 + 503 159185661 - Atu3259 - dehydrogenase 254 58.86 0 277383..278381 - 332 159185662 - Atu3260 - ABC transporter, substrate binding protein 255 62.49 0 278398..280218 - 606 159185663 - Atu3261 - ABC transporter, membrane spanning protein 256 60.89 0 280319..282154 - 611 15891671 - Atu3262 - ABC transporter, nucleotide binding/ATPase protein 257 61.90 0 282210..283406 - 398 159185664 selA Atu3263 - L-seryl-tRNA(Ser) selenium transferase 258 61.38 0 283481..284332 + 283 15891669 - Atu3264 - IclR family transcriptional regulator 259 61.28 0 284339..284821 - 160 159185665 - Atu3265 - hypothetical protein 260 59.31 0 284917..286140 - 407 159185666 - Atu3266 - dihydroorotase 261 60.73 0 286142..287017 - 291 15891666 - Atu3267 - ABC transporter, membrane spanning protein (dipeptide) 262 60.29 0 287017..287925 - 302 159185667 - Atu3268 - ABC transporter, membrane spanning protein (dipeptide) 263 59.20 0 288288..289814 - 508 159185668 - Atu3269 - ABC transporter, substrate binding protein (dipeptide) 264 49.79 -2 289874..290116 - 80 15891663 - Atu3270 - hypothetical protein 265 58.13 0 290253..291377 + 374 159185669 - Atu3271 - glycosyltransferase 266 59.57 0 291854..293050 + 398 159185670 pssN Atu3272 - exopolysaccharide export protein 267 61.50 0 293317..294594 + 425 159185671 - Atu3273 - HlyD family secretion protein 268 59.85 0 294591..297731 + 1046 15891659 - Atu3274 - AcrB/AcrD/AcrF family protein 269 60.79 0 297728..298306 - 192 15891658 ialB Atu3275 - invasion associated protein B 270 60.78 0 298306..302331 - 1341 15891657 - Atu3276 - hypothetical protein 271 60.95 0 302505..303029 - 174 159185672 - Atu3277 - nitrilotriacetate monooxygenase 272 61.63 0 303029..303922 - 297 15891655 - Atu3278 - aryl-alcohol dehydrogenase 273 61.40 0 303922..305079 - 385 15891654 - Atu3279 - methanesulfonate sulfonatase 274 61.99 0 305181..305885 + 234 15891653 - Atu3280 - GntR family transcriptional regulator 275 62.77 0 306220..307296 + 358 159185673 - Atu3281 - ABC transporter, nucleotide binding/ATPase protein 276 57.95 0 307348..308598 + 416 15891651 - Atu3282 - ABC transporter, substrate binding protein (sugar) 277 58.58 0 308758..309684 + 308 159185674 malF Atu3283 - ABC transporter, membrane spanning protein (sugar) 278 60.84 0 309689..310546 + 285 159185675 malG Atu3284 - ABC transporter, membrane spanning protein (sugar) 279 60.40 0 310558..312552 + 664 15891648 - Atu3285 - alpha-glucosidase 280 63.61 +1 313002..313787 + 261 15891647 - Atu3286 - ABC transporter, membrane spanning protein 281 60.09 0 313838..314734 + 298 159185676 - Atu3287 - thiamine biosynthesis associated protein 59.48 MEAN 3.31 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0