version 1.0
Agrobacterium tumefaciens str. C58 chromosome linear, complete sequence - 1..2075577 1851 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 158 61.43 0 169398..170867 - 489 15891768 - Atu3161 - hypothetical protein 159 59.17 0 171019..172032 - 337 159185631 - Atu3162 - LacI family transcription regulator 160 61.42 0 172147..173157 - 336 159185632 - Atu3163 - zinc-binding dehydrogenase 161 60.70 0 173174..173944 - 256 159185633 - Atu3164 - sorbitol dehydrogenase 162 59.49 0 174204..175457 - 417 159185634 - Atu3165 - ABC transporter, substrate binding protein (sorbitol/mannitol) 163 64.04 +1 175837..176826 + 329 159185635 scrK Atu3166 - fructokinase 164 62.52 0 176823..178100 + 425 15891762 agaZ Atu3167 - tagatose 6-phosphate kinase 165 58.30 0 178224..179096 + 290 15891761 - Atu3168 - ABC transporter, membrane spanning protein (sorbitol/mannitol) 166 60.24 0 179109..179933 + 274 15891760 - Atu3169 - ABC transporter, membrane spanning protein (sorbitol/mannitol) 167 61.46 0 179946..180944 + 332 15891759 - Atu3170 - ABC transporter, nucleotide binding/ATPase protein (sorbitol/mannitol) 168 63.05 +1 180955..182031 - 358 15891758 - Atu3171 - ABC transporter, nucleotide binding/ATPase protein (sugar) 169 56.80 0 182036..182866 - 276 15891757 - Atu3172 - ABC transporter, membrane spanning protein (sugar) 170 60.23 0 182870..183754 - 294 159185636 - Atu3173 - ABC transporter, membrane spanning protein (sugar) 171 58.41 0 183965..185224 - 419 15891755 - Atu3174 - ABC transporter, substrate binding protein (sugar) 172 61.55 0 185263..186435 - 390 15891754 mdeA Atu3175 - hypothetical protein 173 62.20 0 186432..187148 - 238 15891753 - Atu3176 - GntR family transcriptional regulator 174 62.87 +1 187365..187838 - 157 15891752 rnhA Atu3177 - ribonuclease H 175 58.97 0 188009..189022 - 337 15891751 - Atu3178 - ABC transporter, substrate binding protein 176 63.21 +1 189051..189917 - 288 159185637 - Atu3179 - ABC transporter, membrane spanning protein 177 61.87 0 189910..190743 - 277 15891749 - Atu3180 - ABC transporter, nucleotide binding/ATPase protein 178 60.68 0 191044..192246 + 400 159185638 - Atu3181 - hypothetical protein 179 60.27 0 192325..192762 - 145 159185639 - Atu3182 - hypothetical protein 180 58.15 0 192860..193129 - 89 15891746 - Atu3183 - hypothetical protein 181 61.59 0 193126..194169 - 347 159185640 - Atu3184 - hypothetical protein 182 58.71 0 194587..195906 + 439 15891744 ugpB Atu3185 - ABC transporter, substrate binding protein (glycerol-3-phosphate) 183 57.94 0 195977..196858 + 293 159185641 ugpA Atu3186 - ABC transporter, membrane spanning protein (glycerol-3-phosphate) 184 56.42 0 196868..197716 + 282 15891742 ugpE Atu3187 - ABC transporter, membrane spanning protein (glycerol-3-phosphate) 185 62.34 0 197716..198777 + 353 15891741 ugpC Atu3188 - glycerol-3-phosphate transporter ATP-binding subunit 186 52.82 -2 198838..199581 - 247 15891740 - Atu3189 - hypothetical protein 187 59.91 0 199903..200346 - 147 15891739 - Atu3190 - hypothetical protein 188 58.95 0 200556..201242 - 228 15891738 - Atu3191 - outer membrane protein 189 61.88 0 201516..202811 - 431 159185642 - Atu3192 - MFS permease 190 63.43 +1 202881..203282 - 133 15891736 - Atu3193 - MarR family transcriptional regulator 191 63.68 +1 203429..203998 - 189 15891735 - Atu3194 - acetyltransferase 192 60.23 0 204249..205382 - 377 159185643 speF Atu3196 - ornithine decarboxylase 193 59.62 0 205919..206812 + 297 159185644 ptxR Atu3197 - LysR family transcriptional regulator 194 60.27 0 206885..207838 - 317 159185645 - Atu3198 - ABC transporter, substrate binding protein (ribose) 195 61.88 0 207911..208912 - 333 159185646 - Atu3199 - ABC transporter, membrane spanning protein (ribose) 196 62.47 0 208965..210488 - 507 15891730 - Atu3200 - ABC transporter, nucleotide binding/ATPase protein (ribose) 197 57.69 0 210682..211305 - 207 159185647 acrR Atu3201 - TetR family transcriptional regulator 198 60.61 0 211435..214569 - 1044 15891728 - Atu3202 - RND multidrug efflux transporter 199 65.27 +1 214582..215796 - 404 159185648 - Atu3203 - RND multidrug efflux membrane permease 200 59.25 0 216138..217715 - 525 15891726 - Atu3204 - GGDEF family protein 201 60.38 0 217813..218607 - 264 159185649 - Atu3205 - hypothetical protein 202 57.76 0 218729..219772 - 347 159185650 - Atu3206 - hypothetical protein 203 57.89 0 220091..222085 + 664 159185651 - Atu3207 - GGDEF family protein 204 64.28 +1 222123..223169 - 348 159185652 - Atu3208 - putative malate dehydrogenase 205 62.50 0 223481..226213 - 910 15891721 - Atu3210 - putative ftsk cell division protein 206 61.19 0 226501..228198 + 565 15891720 - Atu3212 - ABC transporter, substrate binding protein (oligopeptide) 207 63.54 +1 228208..229197 + 329 15891719 - Atu3213 - ABC transporter, membrane spanning protein (oligopeptide) 208 65.34 +1 229194..230024 + 276 15891718 - Atu3214 - ABC transporter, membrane spanning protein (oligopeptide) 209 63.56 +1 230021..230824 + 267 15891717 - Atu3215 - ABC transporter, nucleotide binding/ATPase protein (oligopeptide) 210 61.83 0 230821..231606 + 261 15891716 - Atu3216 - ABC transporter, nucleotide binding/ATPase protein (oligopeptide) 211 66.13 +2 231610..232728 + 372 15891715 aspC Atu3217 - aspartate aminotransferase 212 53.62 -1 232854..233129 - 91 17936929 - Atu3218 - hypothetical protein 213 48.84 -2 233299..233427 + 42 159186361 - Atu8029 - hypothetical protein 214 61.70 0 233509..235320 - 603 15891713 ilvD Atu3219 - dihydroxy-acid dehydratase 215 35.45 -2 235564..235752 + 62 15891711 - Atu3221 - hypothetical protein 216 56.98 0 235845..236804 + 319 15891710 - Atu3222 - ABC transporter, substrate binding protein (ribose) 217 59.91 0 236874..238397 + 507 15891709 - Atu3223 - ABC transporter, nucleotide binding/ATPase protein (ribose) 218 62.56 0 238394..239440 + 348 15891708 - Atu3224 - ABC transporter, membrane spanning protein (ribose) 219 59.84 0 239437..240417 + 326 15891707 - Atu3225 - inner membrane ABC transporter permease protein YjfF 220 62.18 0 240435..241169 + 244 15891706 - Atu3226 - GntR family transcriptional regulator 221 61.87 0 241387..242325 + 312 159185653 - Atu3227 - AraC family transcriptional regulator 222 58.30 0 242333..245608 - 1091 15891704 dnaE Atu3228 - DNA polymerase III, alpha chain 223 66.46 +2 245605..247023 - 472 15891703 - Atu3229 - hypothetical protein 224 64.44 +1 247037..247801 - 254 15891702 - Atu3230 - hypothetical protein 225 57.49 0 247959..248372 + 137 15891701 - Atu8184 - hypothetical protein 226 62.92 +1 248369..249649 + 426 15891700 - Atu3232 - hydroxypyruvate reductase 227 57.95 0 249754..250017 + 87 15891699 - Atu8185 - hypothetical protein 228 61.03 0 250129..251316 - 395 15891698 - Atu3234 - NAD binding oxidoreductase 229 59.26 0 251338..252390 - 350 159185654 - Atu3235 - hypothetical protein 230 61.45 0 252535..253608 - 357 15891696 - Atu3236 - ABC transporter, nucleotide binding/ATPase protein (sugar) 231 57.83 0 253626..254474 - 282 15891695 - Atu3237 - ABC transporter, membrane spanning protein (sugar) 232 58.09 0 254467..255399 - 310 159185655 - Atu3238 - ABC transporter, membrane spanning protein (sugar) 233 61.14 0 255471..256772 - 433 15891693 - Atu3239 - ABC transporter, substrate binding protein (sugar) 234 63.00 +1 256967..258166 + 399 159185656 - Atu3240 - ROK family transcriptional regulator 235 59.85 0 258219..259319 + 366 159185657 - Atu3241 - dehydrogenase 236 57.94 0 259337..259978 + 213 15891690 - Atu3242 - hypothetical protein 237 61.82 0 260020..261381 - 453 159185658 gatA Atu3243 - hypothetical protein 238 58.56 0 261692..264010 + 772 15891688 - Atu3244 - GGDEF family protein 239 55.15 -1 264041..264934 + 297 15891687 - Atu3245 - ABC transporter, substrate binding protein (amino acid) 240 57.70 0 265006..265908 + 300 15891686 - Atu3246 - ABC transporter, substrate binding protein (amino acid) 241 54.79 -1 265951..266211 - 86 15891685 minE Atu3247 - cell division topological specificity factor MinE 242 62.25 0 266208..267023 - 271 15891684 minD Atu3248 - cell division inhibitor 243 62.92 +1 267059..267778 - 239 159185659 minC Atu3249 - septum formation inhibitor 244 51.44 -2 267841..268083 - 80 17936961 - Atu3250 - hypothetical protein 245 62.30 0 268197..268883 + 228 15891682 - Atu3251 - haloacid dehalogenase-like hydrolase 246 61.65 0 269049..269765 + 238 15891681 exuR Atu3252 - GntR family transcriptional regulator 247 55.49 -1 269828..270802 + 324 15891680 - Atu3253 - ABC transporter, substrate binding protein 248 56.02 -1 270863..271435 + 190 15891679 - Atu3254 - ABC transporter, nucleotide binding/ATPase protein (dicarboxylate) 249 59.30 0 271503..272846 + 447 159185660 - Atu3255 - ABC transporter, membrane spanning protein (dicarboxylate) 250 64.18 +1 272922..273968 + 348 15891677 - Atu3256 - zinc-binding dehydrogenase 251 61.62 0 273985..275193 + 402 15891676 uxuA Atu3257 - mannonate dehydratase 252 58.39 0 275221..275643 - 140 15891675 - Atu3258 - hypothetical protein 253 64.35 +1 275818..277329 + 503 159185661 - Atu3259 - dehydrogenase 254 58.86 0 277383..278381 - 332 159185662 - Atu3260 - ABC transporter, substrate binding protein 255 62.49 0 278398..280218 - 606 159185663 - Atu3261 - ABC transporter, membrane spanning protein 256 60.89 0 280319..282154 - 611 15891671 - Atu3262 - ABC transporter, nucleotide binding/ATPase protein 257 61.90 0 282210..283406 - 398 159185664 selA Atu3263 - L-seryl-tRNA(Ser) selenium transferase 59.48 MEAN 3.31 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.