version 1.0
Agrobacterium tumefaciens str. C58 chromosome linear, complete sequence - 1..2075577 1851 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1143 59.10 0 1295449..1296531 + 360 15890803 prfA Atu4174 - peptide chain release factor 1 1144 55.52 -1 1296528..1297397 + 289 15890802 hemK Atu4175 - protoporphyrinogen oxidase 1145 63.61 +1 1297793..1298578 + 261 159186053 - Atu4176 - hypothetical protein 1146 60.23 0 1298943..1301567 + 874 159186054 clpB Atu4177 - ATP-dependent Clp protease, ATP-binding subunit 1147 59.78 0 1301637..1303583 - 648 15890798 - Atu4178 - hypothetical protein 1148 47.46 -2 1303752..1304204 - 150 17937874 - Atu4179 - hypothetical protein 1149 49.23 -2 1306725..1307114 - 129 159186055 - Atu4183 - hypothetical protein 1150 50.67 -2 1309700..1309999 + 99 15890795 - Atu4185 - hypothetical protein 1151 59.75 0 1310831..1311727 - 298 159186056 dapA Atu4189 - dihydropicolinate synthase 1152 57.48 0 1311759..1312640 - 293 159186057 - Atu4190 - calcium-binding protein, regucalcin 1153 59.97 0 1312684..1313415 - 243 159186058 - Atu4191 - GntR family transcriptional regulator 1154 57.23 0 1313719..1315668 + 649 15890790 - Atu4192 - ABC transporter, substrate binding protein (oligopeptide) 1155 58.16 0 1315779..1316765 + 328 15890789 - Atu4193 - ABC transporter, membrane spanning protein (oligopeptide) 1156 59.82 0 1316775..1317899 + 374 15890788 - Atu4194 - ABC transporter, membrane spanning protein (oligopeptide) 1157 58.70 0 1317928..1319634 + 568 159186059 - Atu4195 - ABC transporter, nucleotide binding/ATPase protein (oligopeptide) 1158 58.00 0 1319679..1320866 + 395 15890786 - Atu4196 - hypothetical protein 1159 57.42 0 1320844..1321719 + 291 15890785 - Atu4197 - hypothetical protein 1160 54.88 -1 1321906..1322202 - 98 15890784 - Atu4198 - hypothetical protein 1161 60.03 0 1322273..1322845 - 190 159186060 - Atu4199 - TetR family transcriptional regulator 1162 56.65 0 1322941..1323429 - 162 159186061 - Atu4200 - hypothetical protein 1163 56.53 0 1323428..1324009 + 193 15890781 - Atu4201 - flavodoxin, WrbA-like protein 1164 57.83 0 1324449..1325150 - 233 15890780 - Atu4202 - methyltransferase 1165 59.77 0 1325168..1325878 - 236 15890779 - Atu4203 - hypothetical protein 1166 61.13 0 1325969..1326709 - 246 159186062 - Atu4204 - AraC family transcriptional regulator 1167 58.33 0 1327589..1328236 - 215 159186063 tetR Atu4205 - TetR family transcriptional regulator 1168 60.51 0 1328325..1329509 + 394 15890776 tetA Atu4206 - tetracycline resistance protein 1169 57.70 0 1329649..1330797 - 382 159186064 - Atu4207 - ROK family transcriptional regulator 1170 58.37 0 1330887..1332260 + 457 15890774 - Atu4208 - ABC transporter, substrate binding protein (sugar) 1171 60.09 0 1332328..1333239 + 303 159186065 - Atu4209 - ABC transporter, membrane spanning protein (sugar) 1172 58.17 0 1333239..1334297 + 352 159186066 - Atu4210 - ABC transporter, membrane spanning protein (sugars) 1173 59.30 0 1334303..1335415 + 370 15890771 - Atu4211 - ABC transporter, nucleotide binding/ATPase protein (sugar) 1174 57.70 0 1335428..1336174 + 248 15890770 ugpQ Atu4212 - glycerophosphodiester phosphodiesterase 1175 57.74 0 1336285..1336665 - 126 159186067 - Atu4213 - hypothetical protein 1176 52.38 -2 1336799..1337029 - 76 15890768 cspA Atu4214 - cold shock protein 1177 57.27 0 1337330..1337776 - 148 15890767 ftsZ Atu4215 - cell division protein 1178 61.12 0 1337832..1339130 - 432 159186068 fabF Atu4216 - 3-oxoacyl-(acyl carrier protein) synthase II 1179 60.20 0 1339277..1339864 - 195 159186069 - Atu4217 - TetR family transcriptional regulator 1180 62.25 0 1339962..1341071 + 369 159186070 - Atu4218 - multidrug efflux protein 1181 59.69 0 1341071..1344181 + 1036 15890763 - Atu4219 - cation efflux system protein 1182 56.96 0 1344211..1345086 + 291 15890762 - Atu4220 - short-chain dehydrogenase 1183 61.75 0 1345110..1345658 - 182 15890761 - Atu4221 - hypothetical protein 1184 61.98 0 1345651..1348614 - 987 15890760 soxA Atu4222 - sarcosine oxidase alpha subunit 1185 60.87 0 1348611..1348886 - 91 15890759 soxD Atu4223 - sarcosine oxidase delta subunit 1186 59.63 0 1348911..1350161 - 416 15890758 soxB Atu4224 - sarcosine oxidase beta subunit 1187 59.49 0 1350252..1351226 + 324 15890757 glxA Atu4225 - AraC family transcriptional regulator 1188 59.97 0 1351314..1351940 + 208 159186071 - Atu4226 - transcriptional regulator 1189 60.49 0 1352037..1352942 + 301 15890755 purF Atu4227 - amidophosphoribosyltransferase 1190 58.52 0 1352980..1353666 + 228 15890754 fwdC Atu4228 - formyl-methanofuran dehydrogenase 1191 62.90 +1 1353683..1355011 + 442 15890753 gltB Atu4229 - glutamate synthase large subunit 1192 59.56 0 1355097..1356404 + 435 15890752 glnA Atu4230 - glutamine synthetase III 1193 58.19 0 1356493..1357377 + 294 159186072 purU Atu4231 - formyltetrahydrofolate deformylase 1194 60.63 0 1357532..1358227 + 231 159186073 - Atu4232 - GntR family transcriptional regulator 1195 60.39 0 1358411..1359271 + 286 159186074 - Atu4233 - ABC transporter, substrate binding protein (amino acid) 1196 58.75 0 1359445..1360038 + 197 159186075 - Atu4234 - ABC transporter, membrane spanning protein (amino acid) 1197 59.02 0 1360068..1360799 + 243 159186076 - Atu4235 - ABC transporter, nucleotide binding/ATPase protein (amino acid) 1198 61.41 0 1360880..1362058 + 392 15890746 - Atu4236 - dehydrogenase 1199 61.36 0 1362176..1362778 + 200 15890745 - Atu4237 - hypothetical protein 1200 63.12 +1 1362790..1363635 + 281 159186077 - Atu4238 - hydrolase 1201 60.49 0 1363632..1364570 + 312 15890743 - Atu4239 - flavoprotein oxidoreductase 1202 59.27 0 1364567..1365607 + 346 15890742 - Atu4240 - alkanal monooxygenase alpha chain 1203 61.28 0 1365612..1367078 + 488 159186078 dhaS Atu4241 - aldehyde dehydrogenase 1204 55.87 -1 1367083..1367397 + 104 15890740 - Atu4242 - hypothetical protein 1205 57.76 0 1367454..1368464 + 336 15890739 - Atu4243 - ABC transporter, substrate binding protein (polyamine) 1206 60.50 0 1368524..1369399 + 291 159186079 - Atu4244 - ABC transporter, membrane spanning protein (polyamine) 1207 60.17 0 1369401..1370201 + 266 15890737 - Atu4245 - ABC transporter, membrane spanning protein (polyamine) 1208 59.46 0 1370198..1371280 + 360 15890736 - Atu4246 - ABC transporter, nucleotide binding/ATPase protein (polyamine) 1209 61.03 0 1371293..1372747 + 484 15890735 attK Atu4247 - aldehyde dehydrogenase 1210 59.57 0 1372755..1373036 - 93 159186080 - Atu4248 - hypothetical protein 1211 60.25 0 1373286..1374329 - 347 15890733 - Atu4249 - ABC transporter, nucleotide binding/ATPase protein (sugars) 1212 57.18 0 1374344..1375186 - 280 15890732 - Atu4250 - ABC transporter, membrane spanning protein (sugar) 1213 59.33 0 1375176..1376102 - 308 159186081 - Atu4251 - ABC transporter, membrane spanning protein (sugar) 1214 58.65 0 1376158..1377417 - 419 15890730 - Atu4252 - ABC transporter, substrate binding protein (sugar) 1215 62.32 0 1377447..1379057 - 536 159186082 - Atu4253 - hypothetical protein 1216 61.76 0 1379059..1380117 - 352 15890728 - Atu4254 - LacI family transcription regulator 1217 53.14 -1 1380352..1380876 + 174 159186083 atsA Atu4255 - hypothetical protein 1218 58.46 0 1381036..1382571 - 511 159186084 - Atu4256 - ABC transporter, nucleotide binding/ATPase protein (oligopeptide) 1219 58.21 0 1382645..1383661 - 338 159186085 - Atu4257 - ABC transporter, membrane spanning protein (oligopeptide) 1220 58.12 0 1383768..1384691 - 307 15890724 - Atu4258 - ABC transporter, membrane spanning protein (oligopeptide) 1221 56.45 0 1384746..1386341 - 531 159186086 - Atu4259 - ABC transporter, substrate binding protein (oligopeptide) 1222 58.56 0 1386627..1387403 - 258 159186087 - Atu4260 - ABC transporter, membrane spanning protein 1223 59.00 0 1387390..1388211 - 273 15890721 - Atu4261 - ABC transporter, nucleotide binding/ATPase protein 1224 58.39 0 1388221..1389150 - 309 159186088 - Atu4262 - ABC transporter, substrate binding protein 1225 60.75 0 1389268..1390365 - 365 15890719 - Atu4263 - hypothetical protein 1226 55.85 -1 1390459..1391355 + 298 15890718 - Atu4264 - LysR family transcriptional regulator 1227 58.86 0 1391447..1392061 - 204 15890717 - Atu4265 - hypothetical protein 1228 63.33 +1 1392096..1393442 - 448 15890716 - Atu4266 - GntR family transcriptional regulator 1229 60.99 0 1393578..1393982 + 134 15890715 - Atu4267 - hypothetical protein 1230 61.59 0 1394014..1394643 + 209 159186089 - Atu4268 - RhtB family transporter 1231 62.53 0 1394700..1395545 + 281 159186090 phzC Atu4269 - phenazine biosynthesis protein 1232 56.78 0 1395572..1396168 + 198 159186091 - Atu4270 - hypothetical protein 1233 57.55 0 1396284..1397171 - 295 15890711 - Atu4271 - LysR family transcriptional regulator 1234 53.01 -1 1397284..1397649 + 121 159186365 - Atu8039 - hypothetical protein 1235 57.88 0 1397935..1398378 + 147 15890709 accB Atu4272 - acetyl-CoA carboxylase biotin carboxyl carrier protein 1236 58.49 0 1398375..1399769 + 464 15890708 accC Atu4273 - acetyl-CoA carboxylase, biotin carboxylase 1237 61.77 0 1399766..1400194 + 142 159186092 - Atu4274 - hypothetical protein 1238 57.91 0 1400191..1400898 + 235 15890706 - Atu4275 - hypothetical protein 1239 61.95 0 1400895..1401890 + 331 15890705 - Atu4276 - hypothetical protein 1240 61.59 0 1401921..1402688 + 255 159186093 - Atu4277 - hypothetical protein 1241 58.71 0 1402734..1403939 + 401 159186094 aatA Atu4278 - aspartate aminotransferase 1242 58.50 0 1403998..1404903 - 301 159186095 nac Atu4279 - LysR family transcriptional regulator 59.48 MEAN 3.31 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0