IslandPath Analysis: Aeromonas hydrophila subsp. hydrophila ATCC 7966



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 62.23   STD DEV: 5.38
Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome - 1..4744448
4122 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
935	 64.67	0	1045524..1046075	-	183	117619446	-	AHA_0970	-	isochorismatase family protein
936	 68.11	+1	1046136..1047104	-	322	117617925	-	AHA_0971	-	hypothetical protein
937	 62.61	0	1047293..1049386	+	697	117618308	hgpB	AHA_0972	-	putative outer-membrane heme receptor
938	 66.32	0	1049675..1050814	+	379	117620719	hcaT	AHA_0973	-	major facilitator superfamily transporter phenyl propionate permease (PPP) family protein
939	 61.43	0	1050899..1051108	-	69	117621286	-	AHA_0974	-	hypothetical protein
940	 62.09	0	1051116..1051727	-	203	117619548	-	AHA_0975	-	hypothetical protein
941	 67.01	0	1051947..1055447	+	1166	117621496	-	AHA_0976	-	proline sensor PrlS
942	 64.79	0	1055820..1058429	+	869	117621053	-	AHA_0977	-	chitinase A
943	 67.47	0	1058502..1060880	+	792	117618575	-	AHA_0978	-	putative metalloprotease
944	 67.52	0	1060787..1062886	+	699	117620158	-	AHA_0979	-	basic endochitinase
945	 66.54	0	1062945..1063745	-	266	117617685	-	AHA_0980	-	ribosomal RNA large subunit methyltransferase A, putative
946	 59.78	0	1063871..1064509	-	212	117618783	crp	AHA_0981	-	cAMP-regulatory protein
947	 55.83	-1	1064626..1065225	+	199	117620888	-	AHA_0982	-	chain A, structural Genomics
948	 59.93	0	1065275..1065571	+	98	117618401	-	AHA_0983	-	hypothetical protein
949	 69.68	+1	1065629..1066159	-	176	117619626	-	AHA_0984	-	putative lipoprotein
950	 60.46	0	1066175..1067044	-	289	117621098	-	AHA_0985	-	phosphoribulokinase, plasmid
951	 66.22	0	1067220..1067663	-	147	117618594	-	AHA_0986	-	hypothetical protein
952	 63.77	0	1067660..1068004	-	114	117619298	-	AHA_0987	-	hypothetical protein
953	 65.33	0	1068004..1069647	-	547	117618683	arnT	AHA_0988	-	4-amino-4-deoxy-L-arabinose transferase
954	 67.67	+1	1069717..1070616	-	299	117618382	-	AHA_0989	-	polysaccharide deacetylase family protein
955	 64.61	0	1070609..1072600	-	663	117617804	-	AHA_0990	-	bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase
956	 63.40	0	1072597..1073577	-	326	117621235	-	AHA_0991	-	undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
957	 64.29	0	1073584..1074720	-	378	117620790	-	AHA_0992	-	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase
958	 61.62	0	1074941..1076287	+	448	117619974	-	AHA_0993	-	UDP-glucose dehydrogenase
959	 57.20	0	1076717..1076959	-	80	117619545	-	AHA_0994	-	enolase
960	 65.45	0	1077049..1078203	+	384	117618369	-	AHA_0996	-	GGDEF family protein
961	 67.04	0	1078185..1079267	-	360	117618847	-	AHA_0995	-	alpha/beta hydrolase
962	 63.22	0	1079236..1080135	-	299	117620850	-	AHA_0997	-	chemotaxis protein CheV
963	 70.13	+1	1080317..1080865	-	182	117620671	-	AHA_0998	-	hypothetical protein
964	 56.52	-1	1081043..1081249	+	68	117617912	-	AHA_0999	-	hypothetical protein
965	 63.38	0	1081396..1082034	+	212	117619302	slyD	AHA_1000	-	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD
966	 61.57	0	1082099..1082314	-	71	117618907	-	AHA_1001	-	hypothetical protein
967	 65.12	0	1082329..1083297	-	322	117620085	-	AHA_1002	-	vegetatible incompatibility protein HET-E-1
968	 58.36	0	1083417..1084223	+	268	117619579	fkpA	AHA_1003	-	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA
969	 65.74	0	1084375..1085781	+	468	117621258	-	AHA_1004	-	sigma-54 factor interaction domain-containing protein
970	 65.52	0	1085871..1086740	-	289	117620711	-	AHA_1005	-	TPR repeat-containing protein
971	 65.18	0	1086854..1087189	-	111	117617724	-	AHA_1006	-	hypothetical protein
972	 62.28	0	1087316..1087657	-	113	117620518	-	AHA_1007	-	hypothetical protein
973	 59.22	0	1087744..1089582	-	612	117620219	-	AHA_1008	-	5'-nucleotidase/2',3'-cyclic phosphodiesterase
974	 64.46	0	1089815..1091356	-	513	117620372	-	AHA_1009	-	EAL domain-containing protein
975	 63.74	0	1091535..1092389	-	284	117619732	-	AHA_1010	-	import inner membrane translocase, subunit Tim44
976	 56.86	0	1092570..1092671	+	33	117619069	-	AHA_1011	-	hypothetical protein
977	 61.86	0	1092822..1094216	+	464	117618615	dnaB	AHA_1012	-	replicative DNA helicase
978	 59.14	0	1094283..1094375	+	30	117618939	-	AHA_1013	-	hypothetical protein
979	 56.99	0	1094442..1094534	+	30	117618451	-	AHA_1014	-	hypothetical protein
980	 65.74	0	1094685..1095758	+	357	117617805	alr-1	AHA_1015	-	alanine racemase
981	 57.83	0	1095872..1096120	-	82	117621207	-	AHA_1016	-	putative ferredoxin
982	 61.23	0	1096122..1097483	-	453	117618793	yegQ	AHA_1017	-	U32 family peptidase
983	 60.03	0	1097716..1098453	-	245	117619393	-	AHA_1018	-	EAL domain-containing protein
984	 45.09	-2	1098706..1099428	+	240	117619774	-	AHA_1019	-	hypothetical protein
985	 58.13	0	1099458..1099937	+	159	117620486	-	AHA_1020	-	adhesin major subunit pilin
986	 57.88	0	1100017..1102452	+	811	117621204	-	AHA_1021	-	hypothetical protein
987	 43.87	-2	1102472..1103629	+	385	117617548	-	AHA_1022	-	hypothetical protein
988	 46.79	-2	1103654..1104292	-	212	117617726	-	AHA_1023	-	LuxR family DNA-binding response regulator
989	 54.45	-1	1104414..1107842	+	1142	117618906	-	AHA_1025	-	response regulator/sensor histidine kinase
990	 62.90	0	1108869..1110116	+	415	117620393	-	AHA_1029	-	cysteine desulfurase family protein
991	 64.12	0	1110170..1111231	-	353	117620959	cheB-1	AHA_1030	-	chemotaxis-specific methylesterase
992	 54.35	-1	1111242..1111712	-	156	117621563	-	AHA_1031	-	chemoreceptor glutamine deamidase CheD
993	 56.59	-1	1111723..1112526	-	267	117617480	cheR-1	AHA_1032	-	CheR methyltransferase SAM binding domain-containing protein
994	 60.03	0	1112583..1114751	-	722	117618911	-	AHA_1033	-	methyl-accepting chemotaxis protein
995	 56.02	-1	1114822..1115394	-	190	117618640	cheW-1	AHA_1034	-	chemotaxis protein CheW
996	 59.91	0	1115407..1117329	-	640	117619052	-	AHA_1035	-	methyl-accepting chemotaxis protein
997	 60.84	0	1117345..1119558	-	737	117620351	cheA-1	AHA_1036	-	chemotaxis protein CheA
998	 61.16	0	1119585..1119911	-	108	117620668	rsbV	AHA_1037	-	anti-sigma-B factor antagonist
999	 59.08	0	1119926..1120294	-	122	117621529	-	AHA_1038	-	chemotaxis protein CheY
1000	 62.14	0	1120304..1121518	-	404	117617856	-	AHA_1039	-	methyl-accepting chemotaxis protein, putative
1001	 65.29	0	1121822..1122910	-	362	117617513	-	AHA_1040	-	3-oxoacyl-(acyl carrier protein) synthase III
1002	 67.52	0	1123113..1124054	+	313	117617990	-	AHA_1041	-	LysR family transcriptional regulator
1003	 62.39	0	1124090..1124791	+	233	117619122	-	AHA_1042	-	amino acid transporter LysE
1004	 61.88	0	1124894..1126753	+	619	117619679	-	AHA_1043	-	U32 family peptidase
1005	 65.61	0	1126842..1127504	+	220	117620257	-	AHA_1044	-	hypothetical protein
1006	 65.20	0	1127520..1127996	-	158	117620809	-	AHA_1045	-	methylated-DNA--protein-cysteine methyltransferase
1007	 68.97	+1	1127993..1129558	-	521	117617794	-	AHA_1046	-	helix-turn-helix, AraC type:HhH-GPD:Ada, metal-binding:AlkA, N-terminal
1008	 66.42	0	1129768..1130169	+	133	117618305	-	AHA_1047	-	hypothetical protein
1009	 66.35	0	1130239..1131813	-	524	117618915	-	AHA_1048	-	thermostable carboxypeptidase 1
1010	 65.29	0	1131851..1132432	-	193	117619007	-	AHA_1049	-	Smr domain-containing protein
1011	 49.46	-2	1132586..1132771	-	61	117618263	-	AHA_1050	-	hypothetical protein
1012	 66.11	0	1132904..1133797	-	297	117617790	-	AHA_1051	-	GumN protein
1013	 69.08	+1	1134385..1135212	-	275	117620201	-	AHA_1052	-	short-chain dehydrogenase/reductase
1014	 59.06	0	1135331..1136776	-	481	117619530	-	AHA_1053	-	putative outermembrane porin
1015	 68.47	+1	1137283..1139220	-	645	117618935	-	AHA_1054	-	methyl-accepting chemotaxis protein
1016	 69.01	+1	1139338..1140234	-	298	117618972	-	AHA_1055	-	hypothetical protein
1017	 65.34	0	1140329..1141831	-	500	117618340	-	AHA_1056	-	GntP
1018	 66.35	0	1141828..1142772	-	314	117617764	-	AHA_1057	-	NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR:3-beta hydroxysteroid dehydrogenase/isomerase:dTDP-4-dehydrorhamnose reductase
1019	 65.25	0	1142808..1143581	-	257	117618816	-	AHA_1058	-	AP endonuclease
1020	 63.98	0	1143578..1144210	-	210	117620657	-	AHA_1059	-	putative aldolase
1021	 67.23	0	1144203..1145453	-	416	117617878	-	AHA_1060	-	YgbK domain-containing protein
1022	 68.21	+1	1145450..1146358	-	302	117621054	-	AHA_1061	-	6-phosphogluconate dehydrogenase
1023	 61.74	0	1146614..1147405	+	263	117620653	-	AHA_1062	-	DeoR family transcriptional regulator
1024	 57.73	0	1147784..1150480	-	898	117620364	-	AHA_1063	-	hypothetical protein
1025	 57.00	0	1151726..1154476	+	916	117619710	-	AHA_1064	-	invasin family protein
1026	 54.56	-1	1154664..1155332	+	222	117617869	-	AHA_1065	-	hypothetical protein
1027	 54.54	-1	1155644..1157251	+	535	117619507	-	AHA_1066	-	intimin/invasin family protein
1028	 38.15	-2	1157771..1158517	+	248	117619415	-	AHA_1067	-	hypothetical protein
1029	 36.04	-2	1158514..1160730	+	738	117621295	-	AHA_1068	-	sensory box/GGDEF family protein
1030	 35.28	-2	1161152..1161820	-	222	117618691	-	AHA_1069	-	transcriptional regulator
1031	 34.01	-2	1162913..1163206	+	97	117620015	-	AHA_1070	-	transcriptional activator protein
1032	 53.74	-1	1163620..1163766	-	48	117619583	-	AHA_1071	-	hypothetical protein
1033	 61.98	0	1164200..1165459	-	419	117620812	-	AHA_1072	-	protein UmuC
1034	 59.23	0	1165440..1165883	-	147	117621500	-	AHA_1073	-	protein UmuD
62.23	MEAN

5.38	STD DEV