IslandPathversion 1.0

IslandPath Analysis: Aeromonas hydrophila subsp. hydrophila ATCC 7966



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 62.23 STD DEV: 5.38
Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome - 1..4744448
4122 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
724	 61.50	0	800502..801062	-	186	117621527	-	AHA_0748	-	carbonic anhydrase
725	 64.25	0	801320..801940	+	206	117619766	-	AHA_0749	-	ribonuclease T2 family protein
726	 65.96	0	802009..802293	+	94	117620331	-	AHA_0750	-	hypothetical protein
727	 65.34	0	802290..803348	+	352	117620898	-	AHA_0751	-	2-nitropropane dioxygenase family oxidoreductase
728	 58.39	0	809221..810054	+	277	117621531	-	AHA_0757	-	MutT/nudix family protein
729	 67.32	0	810083..811306	-	407	117619558	-	AHA_0758	-	two-component system sensor kinase
730	 64.76	0	811363..812043	-	226	117620485	-	AHA_0759	-	transcriptional regulatory protein CpxR
731	 68.56	+1	812205..813365	+	386	117619326	-	AHA_0760	-	macrolide-specific efflux protein MacA
732	 68.21	+1	813368..815314	+	648	117619856	-	AHA_0761	-	macrolide-specific ABC-type efflux carrier
733	 62.01	0	815619..816455	-	278	117618623	-	AHA_0762	-	glutamine/glutamate ABC transporter, periplasmic glutamine/glutamate-binding protein
734	 62.34	0	816452..817213	-	253	117619239	-	AHA_0763	-	ABC transporter
735	 65.61	0	817210..817872	-	220	117621263	-	AHA_0764	-	glutamine transport system permease protein GlnP
736	 64.41	0	817947..818612	-	221	117617583	-	AHA_0765	-	glutamine/glutamate ABC transporter, permease protein
737	 70.05	+1	818609..819820	-	403	117620451	-	AHA_0766	-	threonine synthase
738	 65.32	0	820056..822203	+	715	117620927	-	AHA_0767	-	prolyl endopeptidase
739	 67.55	0	822407..824566	+	719	117621162	-	AHA_0768	-	AsmA protein
740	 61.45	0	824742..825278	+	178	117619692	-	AHA_0769	-	acetyltransferase
741	 68.84	+1	825334..826068	+	244	117620215	-	AHA_0770	-	3-oxoacyl-[acyl-carrier-protein] reductase
742	 67.21	0	826119..829052	-	977	117618634	-	AHA_0771	-	glutamate-ammonia ligase adenylyltransferase
743	 63.49	0	829124..829564	-	146	117618826	-	AHA_0772	-	acetyltransferase
744	 64.91	0	829745..830995	-	416	117619329	-	AHA_0773	-	methyl-accepting chemotaxis protein
745	 60.10	0	831027..831848	+	273	117617903	-	AHA_0774	-	ion transporter, putative
746	 60.23	0	832001..832606	+	201	117618349	-	AHA_0775	-	arylsulfatase
747	 66.45	0	832876..836040	+	1054	117620021	-	AHA_0776	-	bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase
748	 67.18	0	836241..837020	+	259	117620428	-	AHA_0777	-	NUDIX family hydrolase
749	 63.14	0	837040..838230	+	396	117619073	hemE	AHA_0778	-	uroporphyrinogen decarboxylase
750	 63.87	0	838411..839340	+	309	117617581	-	AHA_0779	-	ROK family protein
751	 59.64	0	839390..840400	+	336	117618136	epd	AHA_0780	-	erythrose 4-phosphate dehydrogenase
752	 59.79	0	840463..841626	+	387	117621197	pgk	AHA_0781	-	phosphoglycerate kinase
753	 58.15	0	841743..842822	+	359	117619723	fbaA	AHA_0782	-	fructose-bisphosphate aldolase
754	 64.21	0	843043..844347	+	434	117620290	-	AHA_0783	-	oxidoreductase
755	 58.94	0	844532..844945	-	137	117618844	-	AHA_0784	-	hypothetical protein
756	 65.76	0	845070..846842	-	590	117617871	dsbD	AHA_0785	-	thiol:disulfide interchange protein DsbD
757	 61.03	0	846839..847246	-	135	117617493	cutA	AHA_0786	-	divalent-cation tolerance protein CutA
758	 58.54	0	847323..847691	+	122	117618081	-	AHA_0787	-	hypothetical protein
759	 60.73	0	847787..848224	-	145	117618118	-	AHA_0788	-	transmembrane pair
760	 69.17	+1	848349..849227	+	292	117620373	-	AHA_0789	-	regulatory protein, LysR:LysR, substrate-binding
761	 64.90	0	849241..850146	-	301	117619784	-	AHA_0790	-	chain A, Ygfz protein
762	 61.48	0	850260..850529	+	89	117621545	-	AHA_0791	-	TPR repeat-containing protein
763	 68.78	+1	850549..850926	+	125	117620958	-	AHA_0792	-	hypothetical protein
764	 64.37	0	851151..852758	-	535	117617572	nadB	AHA_0793	-	L-aspartate oxidase
765	 54.30	-1	852941..853522	+	193	117621092	-	AHA_0794	-	RNA polymerase sigma factor RpoE
766	 61.08	0	853545..854135	+	196	117619289	rseA	AHA_0795	-	sigma-E factor negative regulatory protein
767	 62.63	0	854071..855135	+	354	117618157	rseB	AHA_0796	-	sigma-E factor regulatory protein RseB
768	 64.50	0	855229..855690	+	153	117620365	rseC	AHA_0797	-	sigma-E factor regulatory protein RseC
769	 60.59	0	855811..857604	+	597	117619540	lepA	AHA_0798	-	GTP-binding protein LepA
770	 59.74	0	857608..858531	+	307	117621293	lepB	AHA_0799	-	signal peptidase I
771	 60.71	0	858532..859203	+	223	117620609	rnc	AHA_0800	-	ribonuclease III
772	 59.89	0	859200..860099	+	299	117619280	era	AHA_0801	-	GTP-binding protein Era
773	 63.98	0	860100..860807	+	235	117618822	recO	AHA_0802	-	DNA repair protein RecO
774	 65.45	0	860970..861707	+	245	117620211	pdxJ	AHA_0803	-	pyridoxal phosphate biosynthetic protein PdxJ
775	 62.53	0	861793..863703	-	636	117619755	-	AHA_0804	-	enterotoxin
776	 66.90	0	863806..864660	-	284	117619542	-	AHA_0805	-	tagatose bisphosphate family class II aldolase
777	 69.83	+1	864651..865850	-	399	117621141	nagA-1	AHA_0806	-	N-acetylglucosamine-6-phosphate deacetylase
778	 65.46	0	865851..866348	-	165	117618357	-	AHA_0807	-	N-acetyl-galactosamine
779	 64.96	0	866332..867210	-	292	117617904	-	AHA_0808	-	N-acetylgalactosamine permease IID component
780	 66.02	0	867200..867976	-	258	117618736	-	AHA_0809	-	N-acetylgalactosamine permease IIC component 1
781	 62.45	0	867992..868465	-	157	117619825	-	AHA_0810	-	N-acetylgalactosamine-specific PTS system transporter subunit IIB
782	 67.69	+1	868465..869634	-	389	117617561	-	AHA_0811	-	putative tagatose-6-phosphate ketose/aldose isomerase
783	 67.58	0	869647..870960	-	437	117618004	-	AHA_0812	-	D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit
784	 63.28	0	871233..872030	+	265	117621502	-	AHA_0813	-	DNA-binding transcriptional regulator AgaR
785	 69.16	+1	872100..873020	-	306	117619832	-	AHA_0814	-	putative N-acetylmuramoyl-L-alanine amidase
786	 61.25	0	873024..873503	-	159	117620287	-	AHA_0815	-	hypothetical protein
787	 64.05	0	873576..876287	-	903	117619875	-	AHA_0816	-	hybrid sensory histidine kinase BarA
788	 64.55	0	876441..877763	+	440	117618818	rumA	AHA_0817	-	23S rRNA 5-methyluridine methyltransferase
789	 62.28	0	878030..880240	+	736	117621333	-	AHA_0818	-	GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp synthetase I) ((p)ppGpp synthetase)
790	 59.77	0	880325..881122	+	265	117619961	-	AHA_0819	-	MazG family protein
791	 58.79	0	881264..882901	+	545	117618946	pyrG	AHA_0820	-	CTP synthetase
792	 57.76	0	882991..884292	+	433	117617509	eno	AHA_0821	-	phosphopyruvate hydratase
793	 55.97	-1	884471..884788	+	105	117619133	-	AHA_0822	-	cell division protein
794	 67.08	0	884781..885512	+	243	117618657	ispD	AHA_0823	-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
795	 61.01	0	885509..885985	+	158	117620244	ispF	AHA_0824	-	2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
796	 64.02	0	885985..887043	+	352	117619805	truD	AHA_0825	-	tRNA pseudouridine synthase D
797	 64.57	0	887024..887785	+	253	117621429	surE	AHA_0826	-	acid phosphatase SurE
798	 63.59	0	887790..888407	+	205	117620836	pcm	AHA_0827	-	protein-L-isoaspartate(D-aspartate) O-methyltransferase
799	 58.51	0	888410..888985	+	191	117620964	-	AHA_0828	-	hypothetical protein
800	 55.97	-1	888924..890036	+	370	117620387	nlpD	AHA_0829	-	lipoprotein NlpD
801	 59.65	0	890084..891067	+	327	117617733	rpoS	AHA_0830	-	RNA polymerase sigma factor RpoS
802	 63.21	0	891152..892165	-	337	117621272	gcp	AHA_0831	-	O-sialoglycoprotein endopeptidase
803	 53.24	-1	892345..892560	+	71	117618153	rpsU	AHA_0832	-	ribosomal protein S21
804	 52.93	-1	892575..893018	+	147	117617706	-	AHA_0833	-	GatB/YqeY domain-containing protein
805	 58.61	0	893107..894894	+	595	117619022	dnaG	AHA_0834	-	DNA primase
806	 57.35	0	895117..896973	+	618	117618585	-	AHA_0835	-	RNA polymerase sigma factor RpoD
807	 62.98	0	897701..900277	-	858	117620706	-	AHA_0837	-	alpha-amylase
808	 66.13	0	900553..901107	-	184	117618646	-	AHA_0838	-	cytochrome B
809	 56.27	-1	901088..901462	-	124	117620911	-	AHA_0839	-	hypothetical protein
810	 67.29	0	901727..903016	-	429	117617677	purD	AHA_0840	-	phosphoribosylamine--glycine ligase
811	 63.97	0	903127..904719	-	530	117617984	purH	AHA_0841	-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
812	 62.33	0	905131..905568	+	145	117618435	zntR	AHA_0842	-	zinc-responsive transcriptional regulator
813	 66.48	0	905558..906094	+	178	117621221	-	AHA_0843	-	riboflavin biosynthesis protein RibD domain-containing protein
814	 63.39	0	906075..906440	+	121	117621552	-	AHA_0844	-	hypothetical protein
815	 64.40	0	906557..907702	-	381	117619818	-	AHA_0845	-	putative oxygen-independent coproporphyrinogen III oxidase
816	 63.65	0	907837..908433	-	198	117620363	rdgB	AHA_0846	-	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
817	 65.80	0	908662..909819	+	385	117618641	-	AHA_0847	-	chloramphenicol resistance protein
818	 68.10	+1	909928..910977	+	349	117617637	-	AHA_0848	-	oxidoreductase, NAD-binding
819	 64.31	0	911635..912186	-	183	117619553	-	AHA_0849	-	ribosomal-protein-alanine acetyltransferase
820	 64.86	0	912186..912740	-	184	117621167	-	AHA_0850	-	ribosomal-protein-serine acetyltransferase
821	 64.92	0	913092..914861	+	589	117618830	-	AHA_0851	-	elastase
822	 69.80	+1	914913..915806	-	297	117620417	-	AHA_0852	-	LysR family transcriptional regulator
823	 66.42	0	916021..917214	+	397	117618279	-	AHA_0853	-	multidrug resistance protein MdtH
62.23	MEA