IslandPath Analysis: Aeromonas hydrophila subsp. hydrophila ATCC 7966



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 62.23   STD DEV: 5.38
Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome - 1..4744448
4122 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3852	 64.91	0	4436103..4437182	+	359	117620860	-	AHA_4000	-	hypothetical protein
3853	 37.29	-2	4437421..4438632	-	403	117620662	-	AHA_4001	-	hypothetical protein
3854	 64.34	0	4439021..4440139	-	372	117617940	-	AHA_4002	-	agmatine deiminase
3855	 67.67	+1	4440307..4441200	+	297	117617462	-	AHA_4003	-	regulatory protein, LysR:LysR, substrate-binding
3856	 69.63	+1	4441289..4443178	+	629	117618862	-	AHA_4004	-	DNA-binding transcriptional regulator DhaR
3857	 64.17	0	4443274..4444356	-	360	117619423	gldA	AHA_4005	-	glycerol dehydrogenase
3858	 69.32	+1	4444495..4445211	-	238	117619648	-	AHA_4006	-	PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DhaM
3859	 67.14	0	4445213..4445842	-	209	117620174	-	AHA_4007	-	dihydroxyacetone kinase ADP-binding subunit
3860	 64.33	0	4445858..4446928	-	356	117620543	dhaK	AHA_4008	-	dihydroxyacetone kinase subunit DhaK
3861	 63.76	0	4447160..4448503	-	447	117621123	-	AHA_4009	-	inner membrane protein YjcD
3862	 57.66	0	4448745..4449077	+	110	117619688	-	AHA_4010	-	phosphoribosylaminoimidazole carboxylase ATPase subunit
3863	 51.72	-1	4454846..4455427	-	193	117620414	-	AHA_4017	-	D,D-heptose 1,7-bisphosphate phosphatase
3864	 56.12	-1	4455501..4456685	-	394	117617738	tuf-1	AHA_4018	-	elongation factor Tu
3865	 55.60	-1	4456740..4458845	-	701	117621354	fusA	AHA_4019	-	translation elongation factor G
3866	 52.87	-1	4458921..4459391	-	156	117618933	rpsG	AHA_4020	-	30S ribosomal protein S7
3867	 54.67	-1	4459485..4459859	-	124	117617539	rpsL	AHA_4021	-	30S ribosomal protein S12
3868	 60.84	0	4460043..4460351	-	102	117619048	-	AHA_4022	-	hypothetical protein
3869	 61.34	0	4460329..4460685	-	118	117618672	-	AHA_4023	-	DsrF protein
3870	 62.60	0	4460695..4461087	-	130	117620404	-	AHA_4024	-	intracellular sulfur oxidation protein DsrE
3871	 57.48	0	4461174..4461554	-	126	117619955	-	AHA_4025	-	endoribonuclease L-PSP, putative
3872	 52.30	-1	4461580..4462296	-	238	117619169	-	AHA_4026	-	MukF protein
3873	 58.91	0	4462494..4466798	-	1434	117618755	rpoC	AHA_4027	-	DNA-directed RNA polymerase, beta' subunit
3874	 56.67	-1	4466890..4470981	-	1363	117621409	rpoB	AHA_4028	-	DNA-directed RNA polymerase, beta subunit
3875	 52.46	-1	4471143..4471508	-	121	117620804	rplL	AHA_4029	-	ribosomal protein L7/L12
3876	 52.89	-1	4471560..4472060	-	166	117620749	-	AHA_4030	-	50S ribosomal subunit protein L10
3877	 53.13	-1	4472317..4473018	-	233	117618174	rplA	AHA_4031	-	ribosomal protein L1
3878	 53.61	-1	4473023..4473451	-	142	117617891	rplK	AHA_4032	-	ribosomal protein L11
3879	 53.80	-1	4473585..4474136	-	183	117619084	nusG	AHA_4033	-	transcription termination/antitermination factor NusG
3880	 58.06	0	4474146..4474517	-	123	117618782	secE	AHA_4034	-	preprotein translocase, SecE subunit
3881	 56.12	-1	4474708..4475892	-	394	117620474	tuf-2	AHA_4036	-	elongation factor Tu
3882	 58.68	0	4476523..4477461	+	312	117621012	coaA	AHA_4039	-	pantothenate kinase
3883	 66.15	0	4477537..4478502	-	321	117618897	-	AHA_4040	-	BirA bifunctional protein
3884	 66.76	0	4478499..4479536	-	345	117621269	murB	AHA_4041	-	UDP-N-acetylenolpyruvoylglucosamine reductase
3885	 61.47	0	4479664..4480317	+	217	117620707	-	AHA_4042	-	KtrA
3886	 63.50	0	4480314..4481669	+	451	117620074	-	AHA_4043	-	KtrB
3887	 68.12	+1	4481697..4482524	-	275	117619630	-	AHA_4044	-	AraC family transcriptional regulator
3888	 66.29	0	4482625..4483158	+	177	117619922	-	AHA_4045	-	alkylhydroperoxidase
3889	 62.76	0	4483172..4483606	+	144	117619132	-	AHA_4046	-	MC21 protein
3890	 66.77	0	4483649..4485619	-	656	117618779	topB	AHA_4047	-	DNA topoisomerase III
3891	 64.28	0	4485984..4487114	+	376	117618472	-	AHA_4048	-	cytochrome c-type protein TorC
3892	 66.14	0	4487137..4489617	+	826	117621386	-	AHA_4049	-	molybdopterin guanine dinucleotide-containing S/N-oxide reductase family protein
3893	 62.99	0	4489760..4490221	-	153	117617748	-	AHA_4050	-	hypothetical protein
3894	 67.70	+1	4490263..4491612	-	449	117617830	-	AHA_4051	-	sensor histidine kinase
3895	 64.84	0	4491650..4492306	-	218	117618398	-	AHA_4052	-	two-component system, regulatory protein
3896	 63.96	0	4492393..4492725	-	110	117621030	-	AHA_4053	-	hypothetical protein
3897	 58.94	0	4492789..4493034	+	81	117621131	-	AHA_4054	-	hypothetical protein
3898	 67.93	+1	4493079..4493711	-	210	117620107	-	AHA_4055	-	membrane protein YedZ
3899	 65.57	0	4493731..4494732	-	333	117618625	-	AHA_4056	-	putative sulfite oxidase subunit YedY
3900	 50.00	-2	4494804..4494899	-	31	117619222	-	AHA_4057	-	hypothetical protein
3901	 66.46	0	4495103..4495585	+	160	117619305	-	AHA_4058	-	chloride channel protein EriC
3902	 65.03	0	4495658..4496938	-	426	117619500	-	AHA_4059	-	transcriptional regulatory protein ZraR
3903	 64.73	0	4496935..4497450	-	171	117620380	-	AHA_4060	-	hypothetical protein
3904	 61.81	0	4497459..4498859	-	466	117618807	-	AHA_4061	-	sensor histidine kinase
3905	 65.31	0	4499180..4499695	+	171	117619747	-	AHA_4062	-	7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
3906	 67.09	0	4499699..4500403	-	234	117620184	-	AHA_4063	-	pteridine reductase 1
3907	 63.46	0	4500523..4500927	+	134	117620748	-	AHA_4065	-	CBS domain-containing protein
3908	 65.18	0	4500924..4501460	-	178	117621059	-	AHA_4064	-	hypothetical protein
3909	 62.61	0	4501546..4502310	+	254	117617888	-	AHA_4066	-	glutamine transport system substrate-binding protein, putative
3910	 56.49	-1	4502405..4502866	-	153	117618479	asnC	AHA_4067	-	DNA-binding transcriptional regulator AsnC
3911	 60.92	0	4502900..4504012	+	370	117618980	asnA	AHA_4068	-	asparagine synthetase AsnA
3912	 69.30	+1	4504023..4504136	-	37	117619378	-	AHA_4069	-	hypothetical protein
3913	 64.97	0	4504222..4505046	-	274	117618802	-	AHA_4070	-	metallo-beta-lactamase superfamily protein
3914	 64.14	0	4505107..4507680	-	857	117619764	clpB	AHA_4071	-	ATP-dependent chaperone protein ClpB
3915	 68.29	+1	4507852..4508589	-	245	117618449	-	AHA_4072	-	hypothetical protein
3916	 62.59	0	4508708..4509688	-	326	117618510	-	AHA_4073	-	ribosomal large subunit pseudouridine synthase D
3917	 55.01	-1	4509644..4510561	+	305	117621430	-	AHA_4074	-	ComL family lipoprotein
3918	 65.99	0	4510710..4512038	-	442	117617887	-	AHA_4075	-	coenzyme A disulfide reductase
3919	 63.38	0	4512132..4513532	-	466	117620755	-	AHA_4076	-	sodium/dicarboxylate symporter family protein
3920	 64.84	0	4513698..4515011	-	437	117619569	-	AHA_4077	-	hypothetical protein
3921	 62.55	0	4515317..4516069	-	250	117620118	-	AHA_4078	-	periplasmic binding protein, putative
3922	 62.69	0	4516166..4517650	-	494	117619102	pntB	AHA_4079	-	pyridine nucleotide transhydrogenase
3923	 61.95	0	4517662..4519188	-	508	117618516	pntA	AHA_4080	-	NAD(P) transhydrogenase subunit alpha
3924	 65.67	0	4519696..4520898	-	400	117618205	-	AHA_4081	-	alcohol dehydrogenase, iron-containing
3925	 65.67	0	4521006..4521908	+	300	117617632	-	AHA_4082	-	putative HTH-type transcriptional regulator YqhC
3926	 67.78	+1	4522504..4524396	-	630	117620665	-	AHA_4083	-	methyl-accepting chemotaxis protein
3927	 64.04	0	4524647..4526017	-	456	117620847	-	AHA_4084	-	phosphatidylserine decarboxylase
3928	 60.22	0	4526595..4527137	+	180	117620276	-	AHA_4086	-	hypothetical protein
3929	 61.18	0	4527403..4528332	+	309	117619960	pyrB	AHA_4087	-	aspartate carbamoyltransferase catalytic subunit
3930	 59.14	0	4528349..4528813	+	154	117618992	pyrI	AHA_4088	-	aspartate carbamoyltransferase regulatory subunit
3931	 64.40	0	4528950..4529522	+	190	117620436	-	AHA_4089	-	arginine repressor
3932	 61.40	0	4529701..4531104	-	467	117617535	-	AHA_4090	-	putative transporter
3933	 56.72	-1	4531228..4532232	-	334	117620615	argF-2	AHA_4091	-	ornithine carbamoyltransferase
3934	 61.60	0	4532363..4533289	-	308	117621279	arcC-2	AHA_4092	-	carbamate kinase
3935	 59.38	0	4533353..4534573	-	406	117619675	arcA-2	AHA_4093	-	arginine deiminase
3936	 55.95	-1	4535244..4535495	+	83	117619867	-	AHA_4094	-	hypothetical protein
3937	 59.26	0	4535596..4536243	+	215	117618886	-	AHA_4095	-	ParA family protein
3938	 51.22	-2	4536245..4536613	+	122	117619338	-	AHA_4096	-	CopG family transcriptional regulator
3939	 61.88	0	4537215..4538948	-	577	117617924	-	AHA_4097	-	methyl-accepting chemotaxis protein
3940	 58.46	0	4539000..4540010	-	336	117617979	mglC	AHA_4098	-	beta-methylgalactoside transporter inner membrane component
3941	 56.67	-1	4540027..4541547	-	506	117621108	mglA	AHA_4099	-	galactose/methyl galaxtoside transporter ATP-binding protein
3942	 59.57	0	4541602..4542588	-	328	117620811	mglB	AHA_4100	-	galactose ABC transporter, periplasmic galactose-binding protein
3943	 65.53	0	4542823..4545900	-	1025	117618533	lacZ	AHA_4101	-	beta-D-galactosidase
3944	 65.07	0	4546119..4547123	-	334	117618214	galR	AHA_4102	-	transcriptional regulator GalR
3945	 66.27	0	4547328..4548341	+	337	117619106	galE-2	AHA_4103	-	UDP-glucose 4-epimerase
3946	 65.06	0	4548448..4549506	+	352	117618551	galT	AHA_4104	-	galactose-1-phosphate uridylyltransferase
3947	 67.45	0	4549503..4550651	+	382	117620488	galK	AHA_4105	-	galactokinase
3948	 67.81	+1	4550572..4551708	+	378	117619928	galM	AHA_4106	-	galactose mutarotase
3949	 68.05	+1	4551894..4552904	+	336	117621009	-	AHA_4107	-	aldo/keto reductase family oxidoreductase
3950	 63.97	0	4553085..4553900	+	271	117620408	-	AHA_4108	-	undecaprenyl pyrophosphate phosphatase
3951	 68.92	+1	4553962..4554627	-	221