IslandPathversion 1.0

IslandPath Analysis: Aeromonas hydrophila subsp. hydrophila ATCC 7966



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 62.23 STD DEV: 5.38
Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome - 1..4744448
4122 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3691	 59.52	0	4255585..4256172	+	195	117619713	-	AHA_3830	-	hypothetical protein
3692	 61.88	0	4256233..4256796	-	187	117621268	mgsA	AHA_3831	-	methylglyoxal synthase
3693	 65.53	0	4256780..4258885	-	701	117621447	-	AHA_3832	-	hypothetical protein
3694	 58.54	0	4259088..4259567	-	159	117618962	bfr	AHA_3833	-	bacterioferritin
3695	 54.79	-1	4259710..4260012	-	100	117618229	-	AHA_3834	-	hypothetical protein
3696	 62.18	0	4260054..4260365	+	103	117620649	-	AHA_3835	-	transcriptional activator HlyU
3697	 68.17	+1	4260362..4262428	+	688	117620721	-	AHA_3837	-	hypothetical protein
3698	 68.33	+1	4262415..4263134	-	239	117619253	-	AHA_3836	-	short chain dehydrogenase/reductase family oxidoreductase
3699	 61.05	0	4263341..4264354	+	337	117621297	-	AHA_3838	-	chemotaxis protein CheV
3700	 65.76	0	4264415..4265854	-	479	117618250	-	AHA_3839	-	transporter gate domain-containing protein
3701	 62.60	0	4265931..4266446	-	171	117621019	-	AHA_3840	-	hypothetical protein
3702	 61.31	0	4266919..4268262	-	447	117619365	-	AHA_3841	-	Ion channel family protein
3703	 61.72	0	4268972..4269739	-	255	117617622	-	AHA_3846	-	hypothetical protein
3704	 61.29	0	4269811..4270182	+	123	117620045	folB	AHA_3847	-	dihydroneopterin aldolase
3705	 66.27	0	4270182..4270691	+	169	117618693	folK-2	AHA_3848	-	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
3706	 66.67	0	4270813..4271295	+	160	117618198	-	AHA_3849	-	DNA-binding protein
3707	 65.80	0	4271305..4272693	-	462	117618058	-	AHA_3850	-	major facilitator transporter
3708	 65.06	0	4272755..4273873	-	372	117618352	-	AHA_3851	-	cobalamin synthesis protein/P47K family protein
3709	 64.73	0	4273892..4275286	-	464	117621252	-	AHA_3852	-	FAD binding domain-containing protein
3710	 64.89	0	4275410..4276027	-	205	117619529	-	AHA_3853	-	amino acid transporter LysE
3711	 70.63	+1	4276104..4277012	+	302	117620392	-	AHA_3854	-	HTH-type transcriptional regulator TrpI
3712	 64.89	0	4277017..4278591	-	524	117618668	-	AHA_3855	-	EAL domain-containing protein
3713	 62.86	0	4278756..4281353	-	865	162139475	acnB	AHA_3856	-	bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
3714	 63.92	0	4281582..4283840	-	752	117620893	-	AHA_3857	-	serine protease
3715	 65.90	0	4284039..4285985	+	648	117619359	-	AHA_3858	-	methyl-accepting chemotaxis protein
3716	 63.76	0	4286011..4287765	+	584	117617631	-	AHA_3859	-	hemolysin secretion protein
3717	 65.57	0	4287909..4288091	+	60	117619286	-	AHA_3860	-	hypothetical protein
3718	 59.73	0	4288159..4289586	-	475	117617915	lpdA	AHA_3861	-	dihydrolipoamide dehydrogenase
3719	 62.34	0	4289736..4291631	-	631	117618366	aceF	AHA_3862	-	pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase
3720	 60.39	0	4291745..4294405	-	886	117620590	aceE	AHA_3863	-	pyruvate dehydrogenase subunit E1
3721	 60.39	0	4294485..4295249	-	254	117621112	pdhR	AHA_3864	-	transcriptional regulator PdhR
3722	 59.34	0	4295525..4296097	-	190	117619699	-	AHA_3865	-	N-acetyl-anhydromuranmyl-L-alanine amidase
3723	 61.74	0	4296188..4296715	+	175	117621109	-	AHA_3866	-	hypothetical protein
3724	 61.31	0	4296721..4297578	+	285	117619520	nadC	AHA_3867	-	nicotinate-nucleotide pyrophosphorylase
3725	 48.03	-2	4297901..4298383	+	160	117618846	-	AHA_3868	-	pilin family protein
3726	 57.28	0	4298377..4300092	+	571	117618626	pilB	AHA_3869	-	type IV-A pilus assembly ATPase PilB
3727	 58.62	0	4300208..4301449	+	413	117618056	pilC	AHA_3870	-	type 4 fimbrial assembly protein PilC
3728	 60.94	0	4301472..4302344	+	290	117617611	gspO	AHA_3871	-	prepilin peptidase
3729	 62.76	0	4302364..4302978	+	204	117621396	coaE	AHA_3872	-	dephospho-CoA kinase
3730	 61.09	0	4302950..4303738	+	262	117620794	-	AHA_3873	-	hypothetical protein
3731	 61.54	0	4303748..4303942	+	64	117620426	-	AHA_3874	-	hypothetical protein
3732	 62.35	0	4304003..4304419	-	138	117621149	-	AHA_3875	-	mutator MutT protein
3733	 64.22	0	4304425..4305609	-	394	117618573	-	AHA_3876	-	TPR repeat-containing protein
3734	 60.68	0	4305684..4308404	-	906	117618932	secA	AHA_3877	-	preprotein translocase, SecA subunit
3735	 59.38	0	4308464..4309369	-	301	117618478	-	AHA_3878	-	M23/M37 peptidase domain-containing protein
3736	 56.06	-1	4309510..4310433	-	307	117617758	lpxC	AHA_3879	-	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
3737	 60.68	0	4310535..4311686	-	383	117618768	ftsZ	AHA_3880	-	cell division protein FtsZ
3738	 60.48	0	4311727..4312986	-	419	117618704	ftsA	AHA_3881	-	cell division protein FtsA
3739	 58.48	0	4312967..4313650	-	227	117618438	ftsQ	AHA_3882	-	cell division protein FtsQ
3740	 64.74	0	4313817..4315271	-	484	117618995	murC	AHA_3883	-	UDP-N-acetylmuramate--alanine ligase
3741	 67.59	0	4315268..4316353	-	361	117621231	murG	AHA_3884	-	undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
3742	 63.85	0	4316353..4317489	-	378	117617598	ftsW	AHA_3885	-	cell division protein FtsW
3743	 66.51	0	4317531..4318814	-	427	117619646	murD	AHA_3886	-	UDP-N-acetylmuramoylalanine--D-glutamate ligase
3744	 61.40	0	4318818..4319900	-	360	117620237	mraY	AHA_3887	-	phospho-N-acetylmuramoyl-pentapeptide-transferase
3745	 64.31	0	4319894..4321249	-	451	117619374	murF	AHA_3888	-	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
3746	 64.92	0	4321246..4322730	-	494	117619938	murE	AHA_3889	-	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
3747	 63.42	0	4322711..4324465	-	584	117617604	ftsI	AHA_3890	-	peptidoglycan synthetase FtsI
3748	 61.90	0	4324462..4324776	-	104	117620415	ftsL	AHA_3891	-	cell division protein FtsL
3749	 62.09	0	4324780..4325718	-	312	117620544	mraW	AHA_3892	-	S-adenosyl-methyltransferase MraW
3750	 59.04	0	4325719..4326177	-	152	117618920	mraZ	AHA_3893	-	MraZ protein
3751	 60.67	0	4327140..4327973	-	277	117619331	-	AHA_3894	-	tetrapyrrole methylase family protein
3752	 62.15	0	4327948..4329960	+	670	117617908	-	AHA_3895	-	LppC superfamily protein
3753	 61.83	0	4329881..4330273	+	130	117618374	-	AHA_3896	-	hypothetical protein
3754	 62.44	0	4330283..4330873	+	196	117621136	gmhA-2	AHA_3897	-	phosphoheptose isomerase
3755	 61.40	0	4330830..4331456	+	208	117620538	-	AHA_3898	-	secreted protein
3756	 59.52	0	4331509..4331928	-	139	117619826	sspB	AHA_3899	-	stringent starvation protein B
3757	 59.68	0	4331931..4332560	-	209	117619618	sspA	AHA_3900	-	stringent starvation protein A
3758	 55.92	-1	4332648..4333382	-	244	117617555	-	AHA_3901	-	ubiquinol--cytochrome c reductase, cytochrome c1
3759	 57.14	0	4333379..4334596	-	405	117618000	petB	AHA_3902	-	ubiquinol-cytochrome c reductase, cytochrome b subunit
3760	 59.39	0	4334599..4335189	-	196	117621513	petA	AHA_3903	-	ubiquinol-cytochrome c reductase, iron-sulfur subunit
3761	 54.20	-1	4335485..4335877	-	130	117617920	rpsI	AHA_3904	-	ribosomal protein S9
3762	 50.82	-2	4335893..4336321	-	142	117619817	rplM	AHA_3905	-	50S ribosomal protein L13
3763	 58.72	0	4336588..4337682	-	364	117620492	-	AHA_3906	-	AFG1 family ATPase
3764	 59.84	0	4337823..4338203	+	126	117618686	-	AHA_3907	-	hypothetical protein
3765	 61.97	0	4338285..4339646	+	453	117619388	degQ	AHA_3908	-	serine peptidase DegQ
3766	 65.15	0	4339736..4340857	+	373	117618466	degS	AHA_3909	-	periplasmic serine peptidase DegS
3767	 61.43	0	4341166..4341528	+	120	117619149	-	AHA_3910	-	transcriptional regulator
3768	 62.02	0	4341529..4341894	+	121	117620173	-	AHA_3911	-	transcriptional regulator
3769	 64.65	0	4341894..4342190	+	98	117620542	-	AHA_3912	-	putative cytoplasmic protein
3770	 62.80	0	4342336..4343007	+	223	117621541	-	AHA_3913	-	permease
3771	 64.06	0	4343019..4343669	+	216	117617833	-	AHA_3914	-	hypothetical protein
3772	 66.67	0	4343713..4344852	+	379	117618344	-	AHA_3915	-	dihydroorotase
3773	 64.78	0	4344836..4345951	+	371	117618789	-	AHA_3916	-	pyridoxal phosphate-dependent enzyme, putative
3774	 65.99	0	4345951..4346691	+	246	117617469	-	AHA_3917	-	4-hydroxy-2-oxoglutarate aldolase
3775	 65.14	0	4346796..4348700	+	634	117617917	-	AHA_3918	-	BigG family transcription antiterminator
3776	 63.74	0	4348716..4348988	-	90	117618360	-	AHA_3919	-	phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr)
3777	 61.71	0	4349009..4349875	-	288	117618832	-	AHA_3920	-	hypothetical protein
3778	 59.06	0	4349918..4350364	-	148	117619275	-	AHA_3921	-	hypothetical protein
3779	 46.88	-2	4350367..4350654	-	95	117619362	yfiA-2	AHA_3922	-	ribosomal subunit interface protein
3780	 59.10	0	4350676..4352115	-	479	117618923	rpoN	AHA_3923	-	RNA polymerase sigma-54 factor
3781	 59.09	0	4352181..4352906	-	241	117620537	-	AHA_3924	-	ABC transporter, ATP-binding protein
3782	 55.85	-1	4352910..4353473	-	187	117620989	-	AHA_3925	-	protein YhbN
3783	 56.86	0	4353424..4353984	-	186	117617523	-	AHA_3926	-	hypothetical protein
3784	 64.50	0	4353981..4354535	-	184	117618454	-	AHA_3927	-	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
3785	 60.74	0	4354535..4355530	-	331	117617703	kdsD	AHA_3928	-	arabinose 5-phosphate isomerase
3786	 61.67	0	4355738..4356538	+	266	117619350	-	AHA_3929	-	ABC transporter, ATP-binding protein
3787	 63.33	0	4356538..4357317	+	259	117618508	-	AHA_3930	-	putative ABC transporter, permease protein
3788	 55.28	-1	4357325..4357816	+	163	117620093	-	AHA_3931	-	Mce family protein
3789	 61.61	0	4357826..4358458	+	210	117620450	ttg2D	AHA_3932	-	toluene tolerance protein Ttg2D
3790	 61.19	0	4358308..4