IslandPath Analysis: Aeromonas hydrophila subsp. hydrophila ATCC 7966



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 62.23   STD DEV: 5.38
Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome - 1..4744448
4122 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3501	 69.27	+1	4054477..4055628	+	383	117620510	-	AHA_3613	-	chromate transport protein ChrA
3502	 65.39	0	4055709..4056101	-	130	117620213	msrB	AHA_3614	-	methionine-R-sulfoxide reductase
3503	 65.64	0	4056158..4058299	-	713	117619662	glgX-2	AHA_3615	-	glycogen debranching enzyme GlgX
3504	 61.94	0	4058299..4060476	-	725	117617687	glgB	AHA_3616	-	glycogen branching enzyme
3505	 63.33	0	4060559..4062835	-	758	117621052	malQ	AHA_3617	-	4-alpha-glucanotransferase
3506	 55.52	-1	4063095..4064090	+	331	117620869	gap-2	AHA_3618	-	glyceraldehyde-3-phosphate dehydrogenase, type I
3507	 65.05	0	4064206..4065072	+	288	117620178	-	AHA_3619	-	aldose 1-epimerase family protein
3508	 64.25	0	4065142..4066176	-	344	117619327	nadA	AHA_3620	-	quinolinate synthetase
3509	 63.96	0	4066356..4068461	+	701	117621406	-	AHA_3621	-	methyl-accepting chemotaxis protein
3510	 60.02	0	4070047..4070859	-	270	117618152	-	AHA_3636	-	TPR domain-containing protein
3511	 58.86	0	4071009..4071533	-	174	117617688	pal	AHA_3637	-	peptidoglycan-associated lipoprotein
3512	 58.82	0	4071583..4072908	-	441	117619070	tolB	AHA_3638	-	beta-propeller repeat-containing to-pal system protein TolB
3513	 58.25	0	4073003..4074166	-	387	117617662	tolA	AHA_3639	-	protein TolA
3514	 60.40	0	4074172..4074618	-	148	117619046	tolR	AHA_3640	-	protein TolR
3515	 57.83	0	4074618..4075307	-	229	117618590	tolQ	AHA_3641	-	protein TolQ
3516	 52.70	-1	4075297..4075704	-	135	117620441	-	AHA_3642	-	acyl-CoA thioester hydrolase YbgC
3517	 61.34	0	4075810..4076166	-	118	117619995	-	AHA_3643	-	protein YbgE
3518	 52.14	-1	4076108..4076224	-	38	117621339	-	AHA_3644	-	cyd operon protein YbgT
3519	 59.89	0	4076239..4077375	-	378	117618417	cydB-2	AHA_3645	-	cytochrome d ubiquinol oxidase, subunit II
3520	 58.51	0	4077388..4078944	-	518	117617801	cydA	AHA_3646	-	cytochrome d ubiquinol oxidase, subunit I
3521	 61.72	0	4079881..4080891	-	336	117617467	ruvB	AHA_3647	-	Holliday junction DNA helicase B
3522	 61.79	0	4080900..4081514	-	204	117618993	ruvA	AHA_3648	-	Holliday junction DNA helicase RuvA
3523	 62.79	0	4081753..4083762	+	669	117617741	-	AHA_3649	-	methyl-accepting chemotaxis protein
3524	 62.96	0	4083898..4085622	+	574	117619295	proS	AHA_3650	-	prolyl-tRNA synthetase
3525	 64.16	0	4085709..4086386	-	225	117618970	-	AHA_3651	-	short chain dehydrogenase/reductase family oxidoreductase
3526	 59.21	0	4086451..4087080	-	209	117620399	-	AHA_3652	-	hypothetical protein
3527	 63.49	0	4087176..4087616	-	146	117620105	-	AHA_3653	-	transporter
3528	 63.08	0	4087676..4088455	+	259	117619560	-	AHA_3654	-	enoyl-CoA hydratase/isomerase family protein
3529	 64.34	0	4088459..4088887	-	142	117620217	-	AHA_3655	-	hypothetical protein
3530	 63.81	0	4089178..4089843	+	221	117618631	-	AHA_3656	-	chloramphenicol acetyltransferase
3531	 62.71	0	4089895..4090602	-	235	117619438	-	AHA_3657	-	hypothetical protein
3532	 64.11	0	4090775..4092379	+	534	117617812	-	AHA_3658	-	periplasmic murein peptide-binding protein
3533	 63.81	0	4092384..4092803	+	139	117617837	-	AHA_3659	-	hypothetical protein
3534	 61.19	0	4092858..4093277	-	139	117618422	-	AHA_3660	-	hypothetical protein
3535	 61.00	0	4093296..4093595	-	99	117621083	-	AHA_3661	-	hypothetical protein
3536	 60.14	0	4093595..4094146	-	183	117619611	-	AHA_3662	-	integral membrane protein
3537	 67.52	0	4094187..4095011	-	274	117618903	proC	AHA_3663	-	pyrroline-5-carboxylate reductase
3538	 61.11	0	4095070..4095771	-	233	117619465	-	AHA_3664	-	hypothetical protein
3539	 61.06	0	4095811..4096845	+	344	117620239	-	AHA_3665	-	twitching mobility protein
3540	 63.96	0	4096874..4097983	+	369	117619622	-	AHA_3666	-	twitching motility protein PilU
3541	 61.63	0	4098015..4098788	+	257	117621094	-	AHA_3667	-	hypothetical protein
3542	 63.32	0	4098965..4100188	-	407	117620545	-	AHA_3668	-	ATP-dependent RNA helicase SrmB
3543	 57.95	0	4100317..4101027	+	236	117618463	-	AHA_3669	-	SmtA protein
3544	 62.77	0	4101219..4102526	+	435	117617883	brnQ-2	AHA_3670	-	branched-chain amino acid transport system II carrier protein
3545	 62.40	0	4102863..4104197	+	444	117619352	brnQ-3	AHA_3671	-	branched-chain amino acid transport system II carrier protein
3546	 58.33	0	4104268..4104531	-	87	117618774	-	AHA_3672	-	hypothetical protein
3547	 59.09	0	4104503..4104964	-	153	117618522	-	AHA_3673	-	chemotaxis protein CheX
3548	 55.99	-1	4104954..4105412	-	152	117620096	zur	AHA_3674	-	zinc uptake regulation protein
3549	 60.49	0	4105551..4106537	+	328	117618436	dusA	AHA_3675	-	tRNA-dihydrouridine synthase A
3550	 61.33	0	4106540..4106689	+	49	117618494	-	AHA_3676	-	hypothetical protein
3551	 59.62	0	4106764..4107189	-	141	117621226	-	AHA_3677	-	hypothetical protein
3552	 50.51	-2	4107291..4107587	-	98	117617689	-	AHA_3678	-	DNA-binding protein HU-alpha
3553	 57.76	0	4107905..4108387	+	160	117621366	algQ	AHA_3679	-	anti-RNA polymerase sigma 70 factor
3554	 57.22	0	4108489..4108869	+	126	117617946	-	AHA_3680	-	type IV pilus assembly protein PilZ
3555	 64.03	0	4108941..4110305	-	454	117619550	radA	AHA_3681	-	DNA repair protein RadA
3556	 63.41	0	4111911..4112678	+	255	117619089	-	AHA_3683	-	hypothetical protein
3557	 65.01	0	4112807..4113712	-	301	117619910	-	AHA_3684	-	esterase/lipase
3558	 66.37	0	4113762..4115468	-	568	117619146	-	AHA_3685	-	phosphoserine phosphatase
3559	 67.51	0	4115555..4117801	+	748	117619584	-	AHA_3686	-	histidine kinase-response regulator hybrid protein
3560	 59.14	0	4117871..4118587	-	238	117618320	deoD-2	AHA_3687	-	purine nucleoside phosphorylase
3561	 63.03	0	4118665..4119873	-	402	117618803	deoB	AHA_3688	-	phosphopentomutase
3562	 61.94	0	4119888..4121219	-	443	117618002	deoA	AHA_3689	-	thymidine phosphorylase
3563	 62.14	0	4121329..4122102	-	257	117618460	deoC-2	AHA_3690	-	deoxyribose-phosphate aldolase
3564	 57.73	0	4122788..4124062	-	424	117621118	-	AHA_3691	-	NupC family nucleoside transporter
3565	 63.37	0	4124276..4125064	-	262	117617593	-	AHA_3692	-	putative deoxyribonuclease
3566	 61.00	0	4125105..4125722	+	205	117619650	-	AHA_3693	-	N-terminal methylation domain-containing protein
3567	 63.27	0	4126088..4127440	-	450	117620248	rumA-2	AHA_3694	-	23S rRNA (uracil-5-)-methyltransferase RumA
3568	 64.86	0	4127775..4129211	-	478	117617972	amt	AHA_3695	-	ammonium transporter
3569	 60.81	0	4129799..4130413	+	204	117621537	-	AHA_3697	-	proline-rich antigen
3570	 61.90	0	4130568..4131638	-	356	117619151	-	AHA_3698	-	putative permease
3571	 61.97	0	4131780..4132886	-	368	117618567	-	AHA_3699	-	putative permease
3572	 62.49	0	4133065..4134573	+	502	117620405	pepA	AHA_3700	-	leucyl aminopeptidase
3573	 63.60	0	4134736..4135191	+	151	117619980	-	AHA_3701	-	DNA polymerase III, chi subunit
3574	 61.59	0	4135194..4138109	+	971	117621368	valS	AHA_3702	-	valyl-tRNA synthetase
3575	 61.21	0	4138122..4139588	+	488	117620852	-	AHA_3703	-	CBS domain-containing protein
3576	 60.06	0	4139607..4140272	+	221	117617498	-	AHA_3704	-	DedA family protein
3577	 62.92	0	4140412..4141239	+	275	117621185	-	AHA_3705	-	D-alanyl-D-alanine carboxypeptidase family protein
3578	 53.44	-1	4142483..4142671	-	62	117620430	csrA	AHA_3712	-	carbon storage regulator
3579	 61.22	0	4142765..4144012	-	415	117620906	-	AHA_3713	-	aspartate kinase
3580	 61.30	0	4144029..4146653	-	874	117621345	alaS	AHA_3714	-	alanyl-tRNA synthetase
3581	 61.68	0	4147104..4147604	-	166	117617700	recX	AHA_3715	-	regulatory protein RecX
3582	 59.81	0	4147646..4148710	-	354	117617987	recA	AHA_3716	-	recA protein
3583	 66.06	0	4148790..4149281	-	163	117618605	-	AHA_3717	-	CinA, C-terminal
3584	 65.81	0	4149516..4152098	+	860	117619909	mutS	AHA_3718	-	DNA mismatch repair protein MutS
3585	 62.73	0	4152192..4153790	-	532	117620494	-	AHA_3719	-	BCCT family transporter
3586	 58.33	0	4153800..4154327	-	175	117619927	-	AHA_3720	-	hypothetical protein
3587	 63.33	0	4154491..4154970	+	159	117620515	-	AHA_3721	-	MarR family transcriptional regulator
3588	 59.97	0	4155019..4155600	-	193	117621564	-	AHA_3722	-	protein of unknown function, DUF
3589	 63.49	0	4155763..4156707	+	314	117619068	-	AHA_3723	-	D-isomer specific 2-hydroxyacid dehydrogenase family protein
3590	 59.49	0	4156774..4158111	-	445	117618377	-	AHA_3724	-	metalloprotease opacity-associated protein A family
3591	 60.56	0	4158372..4159664	+	430	117617784	-	AHA_3725	-	hypothetical protein
3592	 61.78	0	4159664..4160605	+	313	117621188	-	AHA_3727	-	immunogenic protein
3593	 58.96	0	4160600..4161274	-	224	117620759	-	AHA_3726	-	periplasmic protein
3594	 62.95	0	4161360..4162274	-	304	117620049	znuA	AHA_3728	-	zinc ABC transporter, periplasmic zinc-binding protein
3595	 63.01	0	4162369..4163133	+	254	117619620	znuC	AHA_3729	-	high-affinity zinc uptake ABC transporter, ATP-binding protein ZnuC
3596	 63.97	0	4163155..4163934	+	259	117618931	znuB	AHA_3730	-	zinc uptake ABC transporter, permease protein ZnuB
3597	 64.81	0	4164025..4164942	-	305	117620291	-	AHA_3731	-	LysR family transcriptional regulator
3598	 65.62	0	4165034..4165891	+	285	117618577	-	AHA_3732	-	drug/metabolite exporter family protein
3599	 64.26	0	4165902..4166483	-	193	117621213	-	AHA_3733	-	uracil-DNA glycosylase
3600	 64.56	0	4166586..4167488	+	300	117620208	rarD-2	AHA_3735	-	RarD protein
62.23	MEAN

5.