IslandPath Analysis: Aeromonas hydrophila subsp. hydrophila ATCC 7966



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 62.23   STD DEV: 5.38
Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome - 1..4744448
4122 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3315	 68.25	+1	3833218..3835803	-	861	117620856	nirB-1	AHA_3408	-	nitrite reductase [NAD(P)H], large subunit
3316	 65.57	0	3835829..3836650	-	273	117619035	-	AHA_3409	-	nitrate transport ATP-binding protein NrtC
3317	 67.41	0	3836682..3837626	-	314	117617477	-	AHA_3410	-	nitrate transporter component
3318	 66.33	0	3837641..3839140	-	499	117620008	-	AHA_3411	-	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component
3319	 70.09	+1	3839437..3840021	-	194	117620442	-	AHA_3412	-	response regulator NasT, putative
3320	 72.20	+1	3840161..3840919	-	252	117620855	cobA	AHA_3413	-	uroporphyrin-III C-methyltransferase
3321	 69.66	+1	3841089..3843725	-	878	117621327	-	AHA_3414	-	nitrate reductase
3322	 65.68	0	3844029..3844535	+	168	117620534	-	AHA_3415	-	23S rRNA methyltransferase
3323	 58.12	0	3844525..3844641	+	38	117618218	-	AHA_3416	-	RNA methyltransferase
3324	 60.73	0	3844801..3845541	-	246	117620129	-	AHA_3417	-	hypothetical protein
3325	 61.34	0	3845728..3846159	+	143	117619559	-	AHA_3418	-	universal stress protein
3326	 61.79	0	3846229..3846864	-	211	117618990	-	AHA_3419	-	hypothetical protein
3327	 66.99	0	3847018..3848271	-	417	117620449	proA	AHA_3420	-	gamma-glutamyl phosphate reductase
3328	 64.95	0	3848364..3849467	-	367	117619210	proB	AHA_3421	-	gamma-glutamyl kinase
3329	 59.03	0	3849628..3850020	-	130	117618884	crl	AHA_3422	-	DNA-binding transcriptional regulator Crl
3330	 61.70	0	3850082..3851350	-	422	117618053	frsA	AHA_3423	-	fermentation/respiration switch protein
3331	 60.47	0	3851470..3851937	-	155	117617690	gpt	AHA_3424	-	xanthine-guanine phosphoribosyltransferase
3332	 47.37	-2	3852374..3852487	-	37	117619130	-	AHA_3425	-	hypothetical protein
3333	 64.53	0	3852857..3854308	+	483	117619652	pepD	AHA_3426	-	aminoacyl-histidine dipeptidase
3334	 51.67	-1	3854650..3854769	+	39	117621152	-	AHA_3427	-	hypothetical protein
3335	 65.07	0	3854994..3855995	-	333	117617636	-	AHA_3428	-	oligopeptide transport ATP-binding protein AppF
3336	 65.42	0	3855992..3857035	-	347	117620246	-	AHA_3429	-	oligopeptide transport ATP-binding protein OppD
3337	 60.07	0	3857061..3858878	-	605	117620824	-	AHA_3430	-	oligopeptide-binding protein OppA
3338	 60.40	0	3858961..3859998	-	345	117619387	-	AHA_3431	-	inner membrane ABC transporter permease protein YejE
3339	 60.92	0	3860001..3861026	-	341	117619945	-	AHA_3432	-	oligopeptide transport system permease protein OppB
3340	 61.27	0	3861765..3864320	+	851	117618488	-	AHA_3433	-	outer membrane protein
3341	 62.09	0	3864431..3865195	+	254	117619078	-	AHA_3434	-	TonB system biopolymer transport component
3342	 64.05	0	3865192..3866565	+	457	117617540	-	AHA_3435	-	hypothetical protein
3343	 63.45	0	3866576..3867103	+	175	117617985	-	AHA_3436	-	TonB system transport protein ExbB2
3344	 60.54	0	3867171..3867578	+	135	117618714	-	AHA_3437	-	biopolymer transport exbD2 protein
3345	 65.51	0	3867712..3868230	+	172	117619155	-	AHA_3438	-	periplasmic protein TonB2
3346	 64.24	0	3868242..3869477	+	411	117619852	-	AHA_3439	-	TPR repeat-containing protein
3347	 64.50	0	3869902..3872904	-	1000	117620304	-	AHA_3440	-	chitodextrinase
3348	 64.29	0	3873435..3875579	+	714	117619849	-	AHA_3441	-	nuclease
3349	 62.01	0	3876505..3877920	-	471	117620491	gltX	AHA_3447	-	glutamyl-tRNA synthetase
3350	 64.23	0	3878112..3880283	+	723	117617676	-	AHA_3448	-	methyl-accepting chemotaxis transducer
3351	 66.37	0	3880382..3881050	+	222	117617969	-	AHA_3449	-	opacity-associated protein A
3352	 51.43	-2	3881323..3881532	+	69	117619984	-	AHA_3450	-	hypothetical protein
3353	 59.52	0	3882808..3883353	-	181	117621372	orn	AHA_3459	-	oligoribonuclease
3354	 62.78	0	3883400..3884479	+	359	117620846	rsgA	AHA_3460	-	ribosome-associated GTPase
3355	 61.85	0	3884385..3885380	+	331	117618102	psd	AHA_3461	-	phosphatidylserine decarboxylase
3356	 57.94	0	3885377..3885628	+	83	117617668	-	AHA_3462	-	hypothetical protein
3357	 55.16	-1	3885633..3885884	+	83	117619121	-	AHA_3463	-	hypothetical protein
3358	 65.66	0	3885887..3886285	+	132	117619457	-	AHA_3464	-	hypothetical protein
3359	 59.82	0	3886398..3886967	-	189	117618984	-	AHA_3465	-	hypothetical protein
3360	 60.69	0	3887010..3887444	-	144	117620305	-	AHA_3466	-	carboxymuconolactone decarboxylase family protein
3361	 70.40	+1	3887567..3888370	+	267	117619845	-	AHA_3467	-	AraC family transcriptional regulator
3362	 61.87	0	3888431..3888889	-	152	117620572	-	AHA_3468	-	hypothetical protein
3363	 66.11	0	3889097..3891070	+	657	117620272	-	AHA_3469	-	sensory box protein
3364	 58.78	0	3891139..3891645	-	168	117619831	-	AHA_3470	-	hypothetical protein
3365	 64.21	0	3891909..3894185	+	758	117619616	-	AHA_3471	-	immune inhibitor A
3366	 56.30	-1	3894569..3894703	-	44	117619216	-	AHA_3474	-	hypothetical protein
3367	 66.82	0	3894929..3896206	+	425	117618537	-	AHA_3475	-	proline iminopeptidase
3368	 67.57	0	3896306..3899866	+	1186	117618358	-	AHA_3476	-	ABC transporter, ATP-binding protein
3369	 55.56	-1	3899922..3900164	-	80	117617534	-	AHA_3477	-	hypothetical protein
3370	 68.28	+1	3900246..3901421	-	391	117621064	-	AHA_3478	-	extracellular alkaline serine protease
3371	 65.89	0	3901541..3902833	-	430	117621403	-	AHA_3479	-	putative thiosulfate sulfurtransferase
3372	 64.52	0	3902862..3903794	-	310	117618467	-	AHA_3480	-	thermolabile glutaminase
3373	 61.26	0	3903907..3904239	-	110	117618679	-	AHA_3481	-	hypothetical protein
3374	 62.50	0	3904254..3904949	-	231	117619178	trmB	AHA_3482	-	tRNA (guanine-N(7)-)-methyltransferase
3375	 65.45	0	3905316..3906383	+	355	117619828	-	AHA_3483	-	aminopeptidase Y
3376	 64.97	0	3906566..3907747	+	393	117620769	-	AHA_3484	-	aminotransferase, classes I and II
3377	 64.12	0	3907812..3909344	-	510	117620916	-	AHA_3485	-	EAL domain-containing protein
3378	 65.56	0	3909647..3910552	+	301	117621434	-	AHA_3486	-	hypothetical protein
3379	 68.38	+1	3910646..3913093	-	815	117618473	-	AHA_3487	-	ABC-type transport system, permease component
3380	 66.80	0	3913090..3913815	-	241	117618524	-	AHA_3488	-	ABC transporter, ATP-binding protein
3381	 62.17	0	3913814..3914413	+	199	117619110	-	AHA_3489	-	acyl-CoA thioesterase I
3382	 59.79	0	3914497..3915441	-	314	117617728	-	AHA_3490	-	chemotaxis protein CheV
3383	 62.61	0	3915737..3930880	-	5047	117618784	-	AHA_3491	-	hypothetical protein
3384	 63.48	0	3931109..3932770	-	553	117620516	-	AHA_3492	-	hypothetical protein
3385	 58.81	0	3932889..3933524	-	211	117619951	-	AHA_3493	-	hemolysin III
3386	 65.01	0	3933748..3935253	+	501	117619706	-	AHA_3494	-	group II decarboxylase
3387	 53.80	-1	3935358..3935909	+	183	117620603	ispZ	AHA_3495	-	intracellular septation protein A
3388	 64.65	0	3935935..3936231	+	98	117617855	-	AHA_3496	-	YciI-like protein
3389	 63.89	0	3936313..3937104	-	263	117619469	cysQ-2	AHA_3497	-	3'(2'),5'-bisphosphate nucleotidase
3390	 60.44	0	3937251..3937571	+	106	117618885	-	AHA_3498	-	ComEA protein
3391	 59.51	0	3937685..3938578	+	297	117618873	galU	AHA_3499	-	UTP-glucose-1-phosphate uridylyltransferase
3392	 60.87	0	3938792..3940189	+	465	117618661	-	AHA_3500	-	dipeptide/tripeptide permease
3393	 60.19	0	3940263..3941234	-	323	117619260	-	AHA_3501	-	response regulator receiver domain-containing protein
3394	 63.16	0	3941560..3943155	-	531	117617501	-	AHA_3502	-	hypothetical protein
3395	 65.49	0	3941575..3942252	+	225	117618099	-	AHA_3503	-	hypothetical protein
3396	 61.64	0	3942322..3943176	+	284	117620088	-	AHA_3504	-	DNA replication protein, putative
3397	 67.14	0	3943305..3943940	+	211	117621456	-	AHA_3505	-	NAD-dependent epimerase/dehydratase family protein
3398	 65.58	0	3944051..3945247	-	398	117619862	-	AHA_3506	-	ABC-type multidrug transport system, permease component
3399	 65.17	0	3945351..3946487	-	378	117620273	-	AHA_3507	-	ABC-type multidrug transport system, permease component
3400	 65.77	0	3946487..3947491	-	334	117618109	-	AHA_3508	-	membrane-fusion protein
3401	 63.58	0	3947565..3948923	-	452	117618828	-	AHA_3509	-	outer membrane efflux protein
3402	 57.04	0	3949262..3950227	+	321	117619221	-	AHA_3510	-	tRNA-dihydrouridine synthase B
3403	 55.22	-1	3950253..3950549	+	98	117617872	fis	AHA_3511	-	DNA-binding protein Fis
3404	 61.45	0	3950619..3951251	-	210	117618459	-	AHA_3512	-	amino acid transporter LysE
3405	 54.07	-1	3957236..3957640	-	134	117620034	-	AHA_3517	-	iron-sulfur cluster insertion protein ErpA
3406	 62.21	0	3957677..3958372	-	231	117620607	-	AHA_3518	-	hypothetical protein
3407	 64.87	0	3958459..3959853	-	464	117619175	-	AHA_3519	-	chloride channel protein
3408	 64.80	0	3960076..3961362	+	428	117619735	hemL	AHA_3520	-	glutamate-1-semialdehyde-2,1-aminomutase
3409	 62.75	0	3961572..3962387	+	271	117618477	-	AHA_3521	-	hypothetical protein
3410	 63.46	0	3962448..3963350	-	300	117618811	-	AHA_3522	-	hypothetical protein
3411	 65.70	0	3963607..3964329	-	240	117621040	-	AHA_3523	-	PAP2 family protein
3412	 64.73	0	3964517..3965032	+	171	117618120	-	AHA_3524	-	hypothetical protein
3413	 63.63	0	3965108..3966688	-	526	117617783	-	AHA_3525	-	response regulator
3414	 63.72	0	3966803..3967684	-	293	117619015	-	AHA_3526	-	LysR family transcriptional regulator
62.23	MEAN

5.38	STD DEV




Last Updated: Dec 04,