IslandPath Analysis: Aeromonas hydrophila subsp. hydrophila ATCC 7966



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 62.23   STD DEV: 5.38
Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome - 1..4744448
4122 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3041	 62.25	0	3530898..3532889	-	663	117619953	tkt	AHA_3123	-	transketolase
3042	 63.28	0	3533232..3534383	+	383	117621328	metK	AHA_3124	-	S-adenosylmethionine synthetase
3043	 67.98	+1	3534453..3534986	+	177	117620873	sprT	AHA_3125	-	SprT protein
3044	 61.09	0	3534995..3535747	+	250	117618834	-	AHA_3126	-	extracellular deoxyribonuclease
3045	 64.75	0	3535811..3536542	+	243	117617899	-	AHA_3127	-	hypothetical protein
3046	 62.89	0	3536657..3537610	+	317	117619413	gshB	AHA_3128	-	glutathione synthase
3047	 64.08	0	3537722..3539347	-	541	117619093	-	AHA_3129	-	methyl-accepting chemotaxis protein
3048	 62.41	0	3539433..3540020	+	195	117621273	-	AHA_3130	-	hypothetical protein
3049	 62.65	0	3540067..3540489	+	140	117620774	-	AHA_3131	-	hypothetical protein
3050	 60.76	0	3540536..3542041	-	501	117618299	-	AHA_3132	-	inner membrane transporter YhiP
3051	 61.21	0	3542593..3543564	-	323	117619807	-	AHA_3133	-	HTH-type transcriptional regulator YidZ
3052	 59.77	0	3543741..3544523	-	260	117618697	-	AHA_3134	-	hypothetical protein
3053	 63.36	0	3545770..3547041	-	423	117619171	ampC	AHA_3135	-	beta-lactamase
3054	 69.38	+1	3547109..3548029	+	306	117621160	-	AHA_3136	-	MoxR protein
3055	 70.01	+1	3548029..3549015	+	328	117617649	-	AHA_3137	-	hypothetical protein
3056	 70.16	+1	3549002..3550975	+	657	117620091	-	AHA_3138	-	hypothetical protein
3057	 62.37	0	3551218..3552660	-	480	117620937	agcS-2	AHA_3139	-	amino acid carrier protein
3058	 60.75	0	3553392..3554354	+	320	117618912	tal	AHA_3140	-	transaldolase B
3059	 58.83	0	3554748..3555296	-	182	117619439	-	AHA_3141	-	hemerythrin HHE cation binding domain-containing protein
3060	 62.48	0	3555454..3556122	-	222	117617799	ung	AHA_3142	-	uracil-DNA glycosylase
3061	 60.63	0	3556958..3557338	+	126	117620090	-	AHA_3143	-	autonomous glycyl radical cofactor GrcA
3062	 58.00	0	3557469..3558749	-	426	117620377	-	AHA_3144	-	C4-dicarboxylate transporter DctA
3063	 61.40	0	3559056..3559910	-	284	117620000	kdsA	AHA_3145	-	2-dehydro-3-deoxyphosphooctonate aldolase
3064	 64.79	0	3560086..3560886	-	266	117618669	-	AHA_3146	-	hypothetical protein
3065	 61.20	0	3560898..3561281	-	127	117617966	-	AHA_3147	-	invasion gene expression up-regulator
3066	 69.85	+1	3561325..3562173	-	282	117617744	-	AHA_3148	-	protein methyltransferase HemK
3067	 64.83	0	3562173..3563261	-	362	117621299	prfA	AHA_3149	-	peptide chain release factor 1
3068	 64.80	0	3563313..3564650	-	445	117620986	hemA	AHA_3150	-	glutamyl-tRNA reductase
3069	 63.76	0	3564694..3565278	+	194	117620301	lolB	AHA_3151	-	outer membrane lipoprotein LolB
3070	 62.76	0	3565305..3566174	+	289	117619126	ispE	AHA_3152	-	4-diphosphocytidyl-2C-methyl-D-erythritol kinase
3071	 58.41	0	3566469..3567485	+	338	117621438	-	AHA_3154	-	ribose-phosphate pyrophosphokinase
3072	 67.12	0	3567588..3569579	+	663	117621234	-	AHA_3155	-	5'-nucleotidase/2',3'-cyclic phosphodiesterase
3073	 62.48	0	3569777..3570373	+	198	117620789	pth	AHA_3156	-	peptidyl-tRNA hydrolase
3074	 60.62	0	3570608..3571699	+	363	117619645	ychF	AHA_3157	-	GTP-binding protein YchF
3075	 65.52	0	3573107..3574939	-	610	117619200	-	AHA_3166	-	citrate transporter
3076	 61.00	0	3575202..3575924	+	240	117618892	-	AHA_3167	-	nicotinamide mononucleotide transporter PnuC
3077	 71.90	+1	3575921..3576646	+	241	117618045	-	AHA_3168	-	uridine phosphorylase
3078	 65.40	0	3576735..3577445	+	236	117621310	-	AHA_3169	-	cAMP-binding protein
3079	 61.32	0	3577489..3577806	+	105	117621039	-	AHA_3170	-	hypothetical protein
3080	 63.44	0	3577904..3578275	+	123	117620687	-	AHA_3171	-	hypothetical protein
3081	 63.02	0	3578305..3580116	+	603	117618685	-	AHA_3172	-	trehalose-6-phosphate hydrolase
3082	 66.83	0	3580526..3582316	+	596	117621473	-	AHA_3173	-	hypothetical protein
3083	 66.58	0	3582804..3586349	+	1181	117620985	nifJ-2	AHA_3174	-	pyruvate:ferredoxin (flavodoxin) oxidoreductase
3084	 65.79	0	3586417..3587904	-	495	117620310	-	AHA_3175	-	EmrB/QacA family drug resistance transporter
3085	 61.47	0	3587959..3588555	+	198	117619884	-	AHA_3176	-	phosphatase YqaB
3086	 61.15	0	3588641..3589438	-	265	117619157	-	AHA_3177	-	hypothetical protein
3087	 64.76	0	3589548..3591017	-	489	117618726	-	AHA_3178	-	succinylglutamic semialdehyde dehydrogenase
3088	 59.51	0	3591088..3592107	-	339	117618026	astA	AHA_3179	-	arginine N-succinyltransferase beta subunit
3089	 62.40	0	3592183..3593400	-	405	117617515	argD	AHA_3180	-	bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein
3090	 58.76	0	3593678..3594259	-	193	117620011	-	AHA_3181	-	para-aminobenzoate synthase glutamine amidotransferase component II
3091	 53.70	-1	3594280..3594495	-	71	117619120	-	AHA_3182	-	hypothetical protein
3092	 60.90	0	3594619..3595623	-	334	117618550	trpS-2	AHA_3183	-	tryptophanyl-tRNA synthetase
3093	 64.87	0	3595663..3596331	-	222	117618203	gph-2	AHA_3184	-	phosphoglycolate phosphatase
3094	 61.87	0	3596318..3597130	-	270	117618311	rpe	AHA_3185	-	ribulose-phosphate 3-epimerase
3095	 60.02	0	3597382..3598254	-	290	117617792	-	AHA_3186	-	DNA adenine methylase
3096	 62.00	0	3598325..3599932	-	535	117621528	-	AHA_3187	-	DamX-related protein
3097	 59.37	0	3599922..3601004	-	360	117620957	aroB	AHA_3188	-	3-dehydroquinate synthase
3098	 53.76	-1	3601019..3601537	-	172	117620078	aroK-2	AHA_3189	-	shikimate kinase
3099	 59.45	0	3601729..3603930	-	733	117619719	pilQ	AHA_3190	-	type IV pilus secretin PilQ
3100	 54.80	-1	3603945..3604475	-	176	117618158	-	AHA_3191	-	type IV pilus biogenesis protein PilP
3101	 52.67	-1	3604472..3605071	-	199	117619416	pilO	AHA_3192	-	type IV pilus biogenesis protein PilO
3102	 58.20	0	3605068..3605646	-	192	117619082	pilN	AHA_3193	-	type IV pilus biogenesis PilN
3103	 58.17	0	3605634..3606704	-	356	117619973	pilM	AHA_3194	-	type IV pilus biogenesis protein PilM
3104	 61.65	0	3606991..3609480	+	829	117620440	mrcA	AHA_3195	-	penicillin-binding protein 1A
3105	 61.05	0	3609556..3610587	-	343	117620885	-	AHA_3196	-	hydrogen peroxide-inducible genes activator
3106	 61.12	0	3610608..3612248	-	546	117621362	-	AHA_3197	-	methyl-accepting chemotaxis protein
3107	 64.62	0	3612471..3613106	-	211	117618036	-	AHA_3198	-	thioredoxin domain-containing protein
3108	 60.16	0	3613187..3614047	-	286	117618500	-	AHA_3199	-	Zn-dependent hydrolase
3109	 66.33	0	3614174..3615073	+	299	117620002	-	AHA_3200	-	LysR family transcriptional regulator
3110	 62.55	0	3615156..3615932	-	258	117618525	-	AHA_3201	-	hypothetical protein
3111	 65.38	0	3616109..3616966	+	285	117619915	-	AHA_3202	-	hypothetical protein
3112	 65.97	0	3617115..3617834	+	239	117618285	-	AHA_3203	-	M24/M37 family peptidase
3113	 64.69	0	3617912..3619327	-	471	117620797	-	AHA_3204	-	mate efflux family protein
3114	 63.86	0	3619402..3622680	+	1092	117617660	-	AHA_3205	-	small conductance mechanosensitive Ion channel (MscS) family protein
3115	 65.56	0	3622703..3623422	+	239	117618115	-	AHA_3206	-	glycerophosphoryl diester phosphodiesterase family protein
3116	 60.60	0	3623548..3625425	+	625	117619744	-	AHA_3207	-	methyl-accepting chemotaxis protein
3117	 60.95	0	3625943..3627727	+	594	117620153	frdA	AHA_3208	-	fumarate reductase flavoprotein subunit
3118	 58.91	0	3627720..3628454	+	244	117620626	-	AHA_3209	-	fumarate reductase iron-sulfur subunit
3119	 58.15	0	3628471..3628869	+	132	117620813	-	AHA_3210	-	fumarate reductase subunit C
3120	 58.26	0	3628982..3629338	+	118	117621544	-	AHA_3211	-	fumarate reductase subunit D
3121	 64.81	0	3629484..3630182	-	232	117617545	-	AHA_3212	-	hypothetical protein
3122	 68.38	+1	3630276..3630917	+	213	117617992	-	AHA_3213	-	TetR family transcriptional regulator
3123	 63.06	0	3631058..3631834	-	258	117619034	-	AHA_3214	-	hypothetical protein
3124	 66.26	0	3631891..3633111	-	406	117619724	-	AHA_3215	-	hypothetical protein
3125	 68.23	+1	3633245..3633883	-	212	117620135	-	AHA_3216	-	methyltransferase domain-containing protein
3126	 68.06	+1	3634101..3634745	+	214	117620285	-	AHA_3217	-	thermostable hemolysin
3127	 68.85	+1	3634742..3636208	+	488	117621357	-	AHA_3218	-	long-chain acyl-CoA synthetases
3128	 63.33	0	3636205..3636864	+	219	117617907	-	AHA_3219	-	long-chain acyl-CoA synthetase
3129	 68.20	+1	3636861..3637706	+	281	117617906	-	AHA_3220	-	short chain dehydrogenase
3130	 66.04	0	3637708..3638346	+	212	117618334	-	AHA_3221	-	TPR repeat-containing protein
3131	 65.07	0	3638429..3639118	+	229	117618787	-	AHA_3222	-	DNA-binding response regulator
3132	 67.01	0	3639115..3640554	+	479	117619254	-	AHA_3223	-	sensor histidine kinase
3133	 64.30	0	3640610..3641116	-	168	117620207	-	AHA_3224	-	ATP-dependent Zn proteases
3134	 62.84	0	3641522..3642565	+	347	117620652	guaC	AHA_3225	-	guanosine 5'-monophosphate oxidoreductase
3135	 65.34	0	3642660..3643868	+	402	117618359	-	AHA_3226	-	hypothetical protein
3136	 56.26	-1	3643912..3644478	+	188	117618817	efp	AHA_3227	-	translation elongation factor P
3137	 64.27	0	3644620..3645246	+	208	117619902	-	AHA_3228	-	inner membrane protein YjdF
3138	 65.07	0	3645314..3646066	+	250	117619141	-	AHA_3229	-	hypothetical protein
3139	 68.23	+1	3646184..3647140	+	318	117618773	-	AHA_3230	-	glycerate dehydrogenase
3140	 65.82	0	3647202..3647672	-	156	117618442	-	AHA_3231