IslandPathversion 1.0

IslandPath Analysis: Aeromonas hydrophila subsp. hydrophila ATCC 7966



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 62.23 STD DEV: 5.38
Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome - 1..4744448
4122 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2937	 62.51	0	3401253..3403058	-	601	117619025	-	AHA_3015	-	exoenzymes regulatory protein AepA
2938	 62.51	0	3403482..3404756	-	424	117618801	thrC	AHA_3016	-	threonine synthase
2939	 63.81	0	3404753..3405733	-	326	117620401	thrB	AHA_3017	-	homoserine kinase
2940	 63.25	0	3405736..3408195	-	819	117620199	-	AHA_3018	-	bifunctional aspartokinase I/homeserine dehydrogenase I
2941	 52.38	-1	3408319..3408402	-	27	117618492	-	AHA_3019	-	thr operon leader peptide
2942	 60.46	0	3408456..3409148	-	230	117621440	-	AHA_3020	-	putative RNA methyltransferase
2943	 60.24	0	3409344..3411071	+	575	117621071	aceK	AHA_3021	-	bifunctional isocitrate dehydrogenase kinase/phosphatase protein
2944	 61.49	0	3411187..3411534	-	115	117620683	-	AHA_3022	-	hypothetical protein
2945	 58.49	0	3411758..3412234	+	158	117621260	-	AHA_3023	-	hypothetical protein
2946	 63.96	0	3412240..3412719	-	159	117620697	rraA-1	AHA_3024	-	ribonuclease activity regulator protein RraA
2947	 60.43	0	3412762..3413178	-	138	117620902	-	AHA_3025	-	hypothetical protein
2948	 59.72	0	3413555..3414274	+	239	117618149	arcA-1	AHA_3026	-	two-component response regulator
2949	 64.52	0	3414864..3416633	+	589	117617854	-	AHA_3029	-	cysteine/glutathione ABC transporter membrane/ATP-binding component
2950	 68.21	+1	3416626..3418371	+	581	117619490	-	AHA_3030	-	cysteine/glutathione ABC transporter membrane/ATP-binding component
2951	 61.83	0	3418625..3418996	+	123	117618602	-	AHA_3031	-	exopolysaccharide synthesis regulator RcsF
2952	 68.19	+1	3419019..3419411	+	130	117618914	-	AHA_3032	-	hypothetical protein
2953	 67.48	0	3419482..3420462	-	326	117619533	-	AHA_3033	-	isoflavone reductase
2954	 66.67	0	3420710..3421417	+	235	117620705	-	AHA_3034	-	hypothetical protein
2955	 63.64	0	3421481..3422602	-	373	117621294	-	AHA_3035	-	3-oxoacyl-(acyl carrier protein) synthase III
2956	 64.69	0	3422658..3423821	-	387	117621276	-	AHA_3036	-	hypothetical protein
2957	 61.92	0	3423825..3424667	-	280	117621337	-	AHA_3037	-	AAA ATPase
2958	 62.64	0	3424835..3425803	+	322	117619990	cysK	AHA_3038	-	cysteine synthase A
2959	 56.20	-1	3426246..3426503	+	85	117620466	ptsH	AHA_3039	-	phosphocarrier protein PtsH
2960	 56.19	-1	3426548..3428275	+	575	117619463	ptsI-2	AHA_3040	-	phosphoenolpyruvate-protein phosphotransferase
2961	 55.10	-1	3428319..3428828	+	169	117617459	crr	AHA_3041	-	glucose-specific PTS system component
2962	 62.51	0	3428907..3429965	-	352	117618033	-	AHA_3042	-	GGDEF domain-containing protein
2963	 62.15	0	3429931..3430749	-	272	117620791	-	AHA_3043	-	hypothetical protein
2964	 61.72	0	3430969..3431514	+	181	117619835	-	AHA_3044	-	cytochrome b561
2965	 68.93	+1	3431598..3435353	-	1251	117621336	-	AHA_3045	-	exonuclease SbcC
2966	 68.46	+1	3435436..3436662	-	408	117620853	-	AHA_3046	-	nuclease sbcCD subunit D
2967	 65.50	0	3436764..3437192	-	142	117619083	-	AHA_3047	-	acetyltransferase YjaB
2968	 62.61	0	3437373..3438284	+	303	117618630	rdgC	AHA_3048	-	recombination associated protein
2969	 70.38	+1	3438464..3440242	+	592	117620438	-	AHA_3049	-	gamma-glutamyltranspeptidase
2970	 66.42	0	3440629..3442272	+	547	117619992	-	AHA_3050	-	monovalent cation:proton antiporter family protein
2971	 66.41	0	3442315..3443853	+	512	117619836	-	AHA_3051	-	leucyl aminopeptidase
2972	 58.32	0	3444421..3445869	+	482	117621509	pyk-3	AHA_3052	-	pyruvate kinase
2973	 63.42	0	3446019..3449342	+	1107	117618190	kefA	AHA_3053	-	potassium efflux system KefA
2974	 64.03	0	3449552..3450385	+	277	117619903	-	AHA_3054	-	hypothetical protein
2975	 69.94	+1	3450450..3451457	+	335	117619562	-	AHA_3055	-	6-phosphogluconolactonase
2976	 62.35	0	3451559..3452854	-	431	117618770	uraA	AHA_3056	-	uracil permease
2977	 65.83	0	3453103..3454422	+	439	117618423	-	AHA_3057	-	intein-containing protein
2978	 66.37	0	3454419..3454760	+	113	117621262	-	AHA_3058	-	17 kDa antigen
2979	 63.46	0	3454830..3456545	-	571	117620546	-	AHA_3059	-	malate dehydrogenase
2980	 66.22	0	3456786..3457916	+	376	117620336	-	AHA_3060	-	two-component hybrid sensor and regulator
2981	 62.96	0	3457985..3458956	-	323	117619659	-	AHA_3061	-	formate dehydrogenase, cytochrome b556 subunit
2982	 65.54	0	3458953..3459576	-	207	117619514	-	AHA_3062	-	formate dehydrogenase iron-sulfur subunit
2983	 64.15	0	3459581..3462481	-	966	117619904	-	AHA_3063	-	formate dehydrogenase
2984	 64.71	0	3462505..3462708	-	67	117620773	-	AHA_3064	-	Tat pathway signal sequence domain-containing protein
2985	 64.25	0	3462778..3463398	-	206	117621069	-	AHA_3065	-	TorD family cytoplasmic chaperone
2986	 66.15	0	3463409..3465139	-	576	117617793	-	AHA_3066	-	iron-sulfur cluster-binding protein
2987	 60.62	0	3465244..3465921	-	225	117619464	-	AHA_3067	-	hypothetical protein
2988	 65.14	0	3465839..3466429	-	196	117618277	-	AHA_3068	-	hypothetical protein
2989	 36.14	-2	3466704..3467702	-	332	117619008	-	AHA_3069	-	type I restriction enzyme r protein n terminus (hsdr_n)
2990	 62.70	0	3467969..3468826	+	285	117619458	-	AHA_3070	-	formate dehydrogenase accessory protein
2991	 68.29	+1	3468922..3469782	+	286	117620926	-	AHA_3071	-	hypothetical protein
2992	 68.86	+1	3470007..3472100	-	697	117621516	atoS	AHA_3072	-	sensory box sensor histidine kinase AtoS
2993	 69.10	+1	3472132..3473487	-	451	117618089	-	AHA_3073	-	acetoacetate metabolism regulatory protein AtoC
2994	 65.24	0	3473736..3474578	+	280	117618655	-	AHA_3074	-	extracellular tungstate binding protein
2995	 66.67	0	3474646..3475347	+	233	117619248	-	AHA_3075	-	molybdenum transport system permease protein ModB
2996	 66.81	0	3475463..3476158	+	231	117619799	-	AHA_3076	-	molybdenum transport ATP-binding protein ModC
2997	 69.33	+1	3476130..3476768	+	212	117620333	mobA	AHA_3077	-	molybdopterin-guanine dinucleotide biosynthesis protein A
2998	 69.87	+1	3476765..3478510	+	581	117620944	-	AHA_3078	-	molybdopterin biosynthesis MoeA protein
2999	 65.72	0	3478574..3479632	+	352	117621533	-	AHA_3079	-	inner membrane protein YeeA
3000	 61.43	0	3479703..3481076	-	457	117619125	-	AHA_3080	-	metal-dependent phosphohydrolase
3001	 65.06	0	3481164..3481784	-	206	117617589	-	AHA_3081	-	ABC-type multidrug transport system, ATPase and permease component
3002	 62.33	0	3481913..3483181	-	422	117621338	-	AHA_3082	-	methyl-accepting chemotaxis protein
3003	 67.53	0	3483402..3483863	-	153	117619971	-	AHA_3083	-	acetyltransferase
3004	 66.67	0	3483942..3484385	-	147	117619154	-	AHA_3084	-	DoxX
3005	 66.67	0	3484391..3485146	-	251	117618666	-	AHA_3085	-	hypothetical protein
3006	 62.66	0	3485139..3485987	-	282	117619199	-	AHA_3086	-	hypothetical protein
3007	 62.50	0	3486059..3486322	-	87	117618699	-	AHA_3087	-	signal peptide protein
3008	 53.23	-1	3486681..3486881	-	66	117617993	-	AHA_3088	-	hypothetical protein
3009	 57.14	0	3487096..3487389	+	97	117617571	-	AHA_3089	-	hypothetical protein
3010	 64.34	0	3487862..3491341	+	1159	117619855	-	AHA_3092	-	sensory box sensor histidine kinase/response regulator
3011	 59.37	0	3491744..3493429	+	561	117621565	-	AHA_3093	-	peptide ABC transporter, periplasmic peptide-binding protein
3012	 62.09	0	3493549..3494532	+	327	117618713	-	AHA_3094	-	peptide ABC transporter, permease protein
3013	 64.71	0	3494534..3495454	+	306	117619268	-	AHA_3095	-	chitooligosaccharide transport system permease protein
3014	 64.81	0	3495451..3496473	+	340	117619785	-	AHA_3096	-	peptide ABC transporter, ATP-binding protein
3015	 63.34	0	3496485..3497477	+	330	117620678	-	AHA_3097	-	oligopeptide transport ATP-binding protein AppF
3016	 66.44	0	3497580..3499313	+	577	117621388	-	AHA_3098	-	endochitinase
3017	 70.45	+1	3499306..3500178	+	290	117618145	-	AHA_3099	-	N-acetylglucosamine kinase
3018	 67.20	0	3500339..3502207	+	622	117620784	-	AHA_3100	-	beta-hexosaminidase
3019	 66.92	0	3502424..3503977	+	517	117617725	-	AHA_3101	-	aerotaxis receptor Aer
3020	 67.79	+1	3504045..3504401	+	118	117618307	-	AHA_3102	-	putative methylated-DNA binding protein
3021	 59.22	0	3504417..3504698	-	93	117620312	-	AHA_3103	-	hypothetical protein
3022	 62.09	0	3504699..3507320	-	873	117621538	topA	AHA_3104	-	DNA topoisomerase I
3023	 65.99	0	3507682..3509019	+	445	117619820	astB	AHA_3105	-	succinylarginine dihydrolase
3024	 64.98	0	3509106..3510113	-	335	117620350	sohB	AHA_3106	-	putative periplasmic protease
3025	 64.95	0	3510347..3511102	+	251	117619161	-	AHA_3107	-	short chain dehydrogenase/reductase family oxidoreductase
3026	 65.65	0	3511202..3512086	+	294	117618418	-	AHA_3108	-	LysR family transcriptional regulator
3027	 66.16	0	3512153..3513325	-	390	117617998	-	AHA_3109	-	sugar efflux transporter
3028	 67.11	0	3513487..3514623	+	378	117621212	-	AHA_3110	-	putative aminotransferase B
3029	 69.17	+1	3514517..3516274	+	585	117619757	-	AHA_3111	-	immunogenic protein
3030	 65.35	0	3516345..3517253	-	302	117620318	-	AHA_3112	-	LysR family transcriptional regulator
3031	 63.09	0	3517441..3518697	+	418	117617991	purA	AHA_3113	-	adenylosuccinate synthetase
3032	 66.11	0	3518912..3519448	+	178	117621029	-	AHA_3114	-	putative phosphatidylethanolamine-binding protein
3033	 67.16	0	3519460..3520272	+	270	117621494	-	AHA_3115	-	AraC/XylS family transcriptional regulator
3034	 64.41	0	3520457..3522937	+	826	117619790	-	AHA_3116	-	hypothetical protein
3035	 60.58	0	3523016..3524215	-	399	117620349	tyrS-2	AHA_3117	-	tyrosyl-tRNA synthetase
3036	 64.99	0	3524330..3525640	+	436