IslandPath Analysis: Aeromonas hydrophila subsp. hydrophila ATCC 7966



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 62.23   STD DEV: 5.38
Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome - 1..4744448
4122 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2882	 64.24	0	3325944..3329072	+	1042	117619539	-	AHA_2960	-	RND efflux transporter
2883	 65.66	0	3329088..3329684	+	198	117618609	-	AHA_2961	-	hypothetical protein
2884	 64.73	0	3329986..3331485	+	499	117620061	-	AHA_2962	-	copper/silver resistance periplasmic protein
2885	 65.39	0	3331559..3334687	+	1042	117620294	-	AHA_2963	-	cation efflux system protein CusA
2886	 60.19	0	3334692..3335108	+	138	117618624	-	AHA_2964	-	secretion protein HlyD
2887	 64.51	0	3335215..3336003	-	262	117619445	-	AHA_2965	-	hypothetical protein
2888	 62.65	0	3336231..3337925	-	564	117617715	-	AHA_2966	-	decarboxylase, group II
2889	 67.85	+1	3338114..3339130	-	338	117618040	lplA	AHA_2967	-	lipoate-protein ligase A
2890	 64.20	0	3339575..3342004	+	809	117618414	-	AHA_2968	-	PAS/GGDEF domain-containing protein
2891	 63.64	0	3342065..3345274	-	1069	117621281	-	AHA_2969	-	AcrB/AcrD/AcrF family transporter
2892	 66.47	0	3345267..3346304	-	345	117619561	-	AHA_2970	-	AcrA/AcrE family protein
2893	 62.94	0	3346341..3346796	-	151	117619868	-	AHA_2971	-	YeeE/YedE family protein
2894	 66.91	0	3346801..3347211	-	136	117617977	-	AHA_2972	-	YeeE/YedE
2895	 60.06	0	3347211..3347528	-	105	117617514	-	AHA_2973	-	nodulation protein NolR
2896	 60.22	0	3347616..3347801	+	61	117619420	-	AHA_2974	-	inner membrane protein YgaP
2897	 65.87	0	3348219..3348593	+	124	117618752	-	AHA_2975	-	hypothetical protein
2898	 66.53	0	3348797..3349525	+	242	117620464	-	AHA_2976	-	Mg2+ transporter
2899	 66.47	0	3349602..3350627	-	341	117620138	-	AHA_2977	-	fructose repressor
2900	 67.30	0	3350655..3352070	-	471	117621441	-	AHA_2978	-	sucrose-6-phosphate hydrolase
2901	 64.18	0	3352070..3353434	-	454	117621115	-	AHA_2979	-	pts system, sucrose-specific IIBC component
2902	 67.50	0	3353518..3354474	-	318	117620781	-	AHA_2980	-	aminoimidazole riboside kinase
2903	 65.66	0	3354590..3356080	-	496	117618402	-	AHA_2981	-	sucrose porin
2904	 63.52	0	3356344..3357486	-	380	117618864	dnaJ	AHA_2982	-	chaperone protein DnaJ
2905	 58.63	0	3357741..3359669	-	642	117620206	dnaK	AHA_2983	-	chaperone protein DnaK
2906	 61.28	0	3359973..3360548	-	191	117619528	grpE	AHA_2984	-	co-chaperone GrpE
2907	 63.47	0	3360638..3361702	+	354	117621127	-	AHA_2985	-	inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase)
2908	 66.01	0	3361814..3363478	+	554	117620655	recN	AHA_2986	-	recombination and repair protein
2909	 65.88	0	3364060..3364953	+	297	117621014	-	AHA_2987	-	manganese-dependent inorganic pyrophosphatase
2910	 61.68	0	3365314..3365754	+	146	117618267	-	AHA_2988	-	hypothetical protein
2911	 63.49	0	3365969..3367132	+	387	117617817	-	AHA_2989	-	macrolide-specific efflux protein MacA
2912	 66.36	0	3367129..3369072	+	647	117619235	-	AHA_2990	-	macrolide-specific ABC-type efflux carrier
2913	 67.98	+1	3369069..3370442	+	457	117618497	-	AHA_2991	-	outer membrane efflux protein
2914	 66.42	0	3370614..3371420	+	268	117620865	-	AHA_2992	-	vibriobactin utilization protein ViuB
2915	 65.02	0	3371634..3372788	+	384	117621489	-	AHA_2993	-	phospho-2-dehydro-3-deoxyheptonate aldolase
2916	 56.69	-1	3373371..3373781	-	136	117617525	-	AHA_2994	-	DNA-binding protein StpA
2917	 60.57	0	3374198..3374656	-	152	117617971	-	AHA_2995	-	acetyltransferase
2918	 60.08	0	3374807..3375307	+	166	117618675	-	AHA_2996	-	hypothetical protein
2919	 54.68	-1	3375377..3375718	-	113	117619205	-	AHA_2997	-	inner membrane protein YhaI
2920	 63.58	0	3376442..3377380	+	312	117620368	-	AHA_2998	-	transcriptional regulatory protein, C terminal
2921	 64.48	0	3377952..3379229	-	425	117621010	-	AHA_2999	-	FAD dependent oxidoreductase
2922	 66.67	0	3379281..3379892	-	203	117621486	-	AHA_3000	-	DNA-binding transcriptional repressor PuuR
2923	 67.28	0	3380203..3381666	+	487	117617848	-	AHA_3001	-	succinate-semialdehyde dehydrogenase (NADP+)
2924	 66.98	0	3381816..3383105	+	429	117617839	gabT	AHA_3002	-	4-aminobutyrate transaminase
2925	 63.54	0	3383463..3384806	+	447	117618588	-	AHA_3003	-	amino acid permease
2926	 63.17	0	3385313..3386656	+	447	117621051	-	AHA_3004	-	amino acid permease
2927	 62.35	0	3386755..3387264	-	169	117617657	-	AHA_3005	-	hypothetical protein
2928	 66.75	0	3387384..3388538	+	384	117620245	-	AHA_3006	-	sodium dependent phosphate pump
2929	 60.93	0	3388706..3389176	+	156	117620814	-	AHA_3007	-	fkbp-type peptidyl-prolyl cis-trans isomerase fkpa
2930	 68.23	+1	3389563..3390330	+	255	117619498	-	AHA_3008	-	extradiol ring-cleavage dioxygenase, class III enzyme, subunit B
2931	 67.89	+1	3390494..3393763	+	1089	117619924	-	AHA_3009	-	virulence sensor protein BvgS
2932	 62.68	0	3394220..3394921	-	233	117618562	deoD-1	AHA_3010	-	purine nucleoside phosphorylase
2933	 62.04	0	3395208..3395618	-	136	117619023	-	AHA_3011	-	hypothetical protein
2934	 34.72	-2	3396182..3397264	+	360	117620602	-	AHA_3012	-	region found in RelA / SpoT proteins
2935	 66.86	0	3397606..3399177	-	523	117618199	-	AHA_3013	-	ABC transporter ATPase
2936	 54.60	-1	3399584..3400486	+	300	117617512	-	AHA_3014	-	hypothetical protein
2937	 62.51	0	3401253..3403058	-	601	117619025	-	AHA_3015	-	exoenzymes regulatory protein AepA
2938	 62.51	0	3403482..3404756	-	424	117618801	thrC	AHA_3016	-	threonine synthase
2939	 63.81	0	3404753..3405733	-	326	117620401	thrB	AHA_3017	-	homoserine kinase
2940	 63.25	0	3405736..3408195	-	819	117620199	-	AHA_3018	-	bifunctional aspartokinase I/homeserine dehydrogenase I
2941	 52.38	-1	3408319..3408402	-	27	117618492	-	AHA_3019	-	thr operon leader peptide
2942	 60.46	0	3408456..3409148	-	230	117621440	-	AHA_3020	-	putative RNA methyltransferase
2943	 60.24	0	3409344..3411071	+	575	117621071	aceK	AHA_3021	-	bifunctional isocitrate dehydrogenase kinase/phosphatase protein
2944	 61.49	0	3411187..3411534	-	115	117620683	-	AHA_3022	-	hypothetical protein
2945	 58.49	0	3411758..3412234	+	158	117621260	-	AHA_3023	-	hypothetical protein
2946	 63.96	0	3412240..3412719	-	159	117620697	rraA-1	AHA_3024	-	ribonuclease activity regulator protein RraA
2947	 60.43	0	3412762..3413178	-	138	117620902	-	AHA_3025	-	hypothetical protein
2948	 59.72	0	3413555..3414274	+	239	117618149	arcA-1	AHA_3026	-	two-component response regulator
2949	 64.52	0	3414864..3416633	+	589	117617854	-	AHA_3029	-	cysteine/glutathione ABC transporter membrane/ATP-binding component
2950	 68.21	+1	3416626..3418371	+	581	117619490	-	AHA_3030	-	cysteine/glutathione ABC transporter membrane/ATP-binding component
2951	 61.83	0	3418625..3418996	+	123	117618602	-	AHA_3031	-	exopolysaccharide synthesis regulator RcsF
2952	 68.19	+1	3419019..3419411	+	130	117618914	-	AHA_3032	-	hypothetical protein
2953	 67.48	0	3419482..3420462	-	326	117619533	-	AHA_3033	-	isoflavone reductase
2954	 66.67	0	3420710..3421417	+	235	117620705	-	AHA_3034	-	hypothetical protein
2955	 63.64	0	3421481..3422602	-	373	117621294	-	AHA_3035	-	3-oxoacyl-(acyl carrier protein) synthase III
2956	 64.69	0	3422658..3423821	-	387	117621276	-	AHA_3036	-	hypothetical protein
2957	 61.92	0	3423825..3424667	-	280	117621337	-	AHA_3037	-	AAA ATPase
2958	 62.64	0	3424835..3425803	+	322	117619990	cysK	AHA_3038	-	cysteine synthase A
2959	 56.20	-1	3426246..3426503	+	85	117620466	ptsH	AHA_3039	-	phosphocarrier protein PtsH
2960	 56.19	-1	3426548..3428275	+	575	117619463	ptsI-2	AHA_3040	-	phosphoenolpyruvate-protein phosphotransferase
2961	 55.10	-1	3428319..3428828	+	169	117617459	crr	AHA_3041	-	glucose-specific PTS system component
2962	 62.51	0	3428907..3429965	-	352	117618033	-	AHA_3042	-	GGDEF domain-containing protein
2963	 62.15	0	3429931..3430749	-	272	117620791	-	AHA_3043	-	hypothetical protein
2964	 61.72	0	3430969..3431514	+	181	117619835	-	AHA_3044	-	cytochrome b561
2965	 68.93	+1	3431598..3435353	-	1251	117621336	-	AHA_3045	-	exonuclease SbcC
2966	 68.46	+1	3435436..3436662	-	408	117620853	-	AHA_3046	-	nuclease sbcCD subunit D
2967	 65.50	0	3436764..3437192	-	142	117619083	-	AHA_3047	-	acetyltransferase YjaB
2968	 62.61	0	3437373..3438284	+	303	117618630	rdgC	AHA_3048	-	recombination associated protein
2969	 70.38	+1	3438464..3440242	+	592	117620438	-	AHA_3049	-	gamma-glutamyltranspeptidase
2970	 66.42	0	3440629..3442272	+	547	117619992	-	AHA_3050	-	monovalent cation:proton antiporter family protein
2971	 66.41	0	3442315..3443853	+	512	117619836	-	AHA_3051	-	leucyl aminopeptidase
2972	 58.32	0	3444421..3445869	+	482	117621509	pyk-3	AHA_3052	-	pyruvate kinase
2973	 63.42	0	3446019..3449342	+	1107	117618190	kefA	AHA_3053	-	potassium efflux system KefA
2974	 64.03	0	3449552..3450385	+	277	117619903	-	AHA_3054	-	hypothetical protein
2975	 69.94	+1	3450450..3451457	+	335	117619562	-	AHA_3055	-	6-phosphogluconolactonase
2976	 62.35	0	3451559..3452854	-	431	117618770	uraA	AHA_3056	-	uracil permease
2977	 65.83	0	3453103..3454422	+	439	117618423	-	AHA_3057	-	intein-containing protein
2978	 66.37	0	3454419..3454760	+	113	117621262	-	AHA_3058	-	17 kDa antigen
2979	 63.46	0	3454830..3456545	-	571	117620546	-	AHA_3059	-	malate dehydrogenase
2980	 66.22	0	3456786..3457916	+	376	117620336	-	AHA_3060	-	two-component hybrid sensor and regulator
2981	 62.96	0	3457985..3458956	-	323	117619659	-	AHA_3061	-	formate dehydrogenase, cytochrome b556 subunit
62.23	MEAN

5.38	STD DEV




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