IslandPath Analysis: Aeromonas hydrophila subsp. hydrophila ATCC 7966



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 62.23   STD DEV: 5.38
Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome - 1..4744448
4122 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2600	 59.82	0	2983971..2984627	+	218	117618579	-	AHA_2674	-	hypothetical protein
2601	 65.00	0	2984791..2986944	+	717	117618991	-	AHA_2675	-	hypothetical protein
2602	 59.42	0	2986965..2987309	+	114	117620322	-	AHA_2676	-	dissimilatory sulfite reductase, gamma subunit
2603	 65.17	0	2987367..2988167	-	266	117619842	-	AHA_2677	-	protein DedD
2604	 66.19	0	2988242..2989489	-	415	117621230	folC	AHA_2678	-	FolC bifunctional protein
2605	 60.65	0	2989504..2990367	-	287	117620783	accD	AHA_2679	-	acetyl-CoA carboxylase, carboxyl transferase, beta subunit
2606	 63.95	0	2990487..2991296	-	269	117619854	truA	AHA_2680	-	tRNA pseudouridine synthase A
2607	 66.17	0	2991476..2993674	-	732	117620298	-	AHA_2681	-	motility protein FimV
2608	 62.64	0	2993950..2994966	-	338	117618052	asd-2	AHA_2682	-	aspartate-semialdehyde dehydrogenase
2609	 66.93	0	2995109..2996239	-	376	117618934	-	AHA_2683	-	erythronate-4-phosphate dehydrogenase
2610	 68.81	+1	2996562..2997308	+	248	117621237	-	AHA_2684	-	phosphatidylglycerophosphatase B
2611	 61.49	0	2997380..2998210	-	276	117617464	-	AHA_2685	-	outer membrane lipoprotein
2612	 66.11	0	2998447..2998986	+	179	117619654	-	AHA_2686	-	isochorismatase family protein
2613	 66.08	0	2999464..3001338	+	624	117620234	-	AHA_2687	-	serine proteinase
2614	 67.97	+1	3001356..3001814	+	152	117619851	-	AHA_2688	-	hypothetical protein
2615	 64.00	0	3001952..3004618	+	888	117620313	-	AHA_2689	-	beta-glucosidase
2616	 63.28	0	3004713..3006098	-	461	117620878	-	AHA_2690	-	transcriptional regulator, AraC family protein
2617	 63.63	0	3005995..3008367	-	790	117617578	ppsA	AHA_2691	-	phosphoenolpyruvate synthase
2618	 62.73	0	3008682..3009494	+	270	117617893	-	AHA_2692	-	hypothetical protein
2619	 63.89	0	3009584..3009871	-	95	117618706	-	AHA_2693	-	hypothetical protein
2620	 60.28	0	3010234..3011610	+	458	117619044	-	AHA_2694	-	aromatic amino acid transport protein AroP
2621	 57.78	0	3011858..3012577	-	239	117619801	-	AHA_2695	-	hypothetical protein
2622	 56.63	-1	3012619..3013176	-	185	117620362	-	AHA_2696	-	hypothetical protein
2623	 62.92	0	3013263..3026045	-	4260	117620923	-	AHA_2697	-	structural toxin protein RtxA
2624	 53.48	-1	3026202..3028127	-	641	117617767	-	AHA_2698	-	diguanylate cyclase/phosphodiesterase
2625	 54.33	-1	3029012..3030340	-	442	117618430	-	AHA_2699	-	agglutination protein
2626	 53.77	-1	3030376..3031794	-	472	117618439	-	AHA_2700	-	HlyD family secretion protein
2627	 57.67	0	3031787..3033931	-	714	117620529	-	AHA_2701	-	toxin secretion ATP-binding protein
2628	 62.61	0	3034335..3035270	-	311	117621140	-	AHA_2702	-	radical SAM protein
2629	 63.39	0	3035884..3040341	+	1485	117619669	gltB	AHA_2703	-	glutamate synthase subunit alpha
2630	 63.56	0	3040354..3041769	+	471	117619509	gltD	AHA_2704	-	glutamate synthase subunit beta
2631	 66.14	0	3041856..3042617	-	253	117619819	-	AHA_2705	-	amino acid ABC transporter, ATP-binding protein
2632	 61.21	0	3042614..3043291	-	225	117620816	-	AHA_2706	-	L-cystine ABC transporter, permease protein
2633	 59.04	0	3043328..3044101	-	257	117621407	-	AHA_2707	-	amino acid ABC transporter, periplasmic amino acid-binding protein
2634	 62.77	0	3044369..3044779	-	136	117617694	-	AHA_2708	-	hypothetical protein
2635	 65.28	0	3044789..3045367	-	192	117617970	-	AHA_2709	-	O-methyltransferase
2636	 66.45	0	3045436..3045903	-	155	117618083	soxR	AHA_2710	-	redox-sensitive transcriptional activator SoxR
2637	 67.67	+1	3045976..3046968	+	330	117618386	-	AHA_2711	-	hypothetical protein
2638	 66.44	0	3046988..3047419	-	143	117619005	-	AHA_2712	-	extracellular protease
2639	 64.27	0	3047487..3048527	-	346	117619342	-	AHA_2713	-	extracellular protease
2640	 66.20	0	3048800..3049438	-	212	117619257	-	AHA_2714	-	hypothetical protein
2641	 65.61	0	3049538..3050764	-	408	117620037	-	AHA_2715	-	putative ATP-dependent RNA helicase RhlE
2642	 58.99	0	3051085..3051618	-	177	117619588	-	AHA_2716	-	spermidine N(1)-acetyltransferase
2643	 65.59	0	3051718..3052368	-	216	117619866	-	AHA_2717	-	inner membrane protein YqjA
2644	 63.76	0	3052599..3054182	-	527	117620701	-	AHA_2718	-	CHASE4 domain-contain protein
2645	 64.68	0	3054404..3055360	+	318	117621001	-	AHA_2719	-	hypothetical protein
2646	 57.37	0	3055495..3056451	+	318	117618310	-	AHA_2720	-	DNA-binding protein
2647	 66.11	0	3057209..3058462	-	417	117617834	-	AHA_2721	-	hypothetical protein
2648	 65.64	0	3058555..3060213	-	552	117619460	leuA-2	AHA_2722	-	2-isopropylmalate synthase
2649	 64.07	0	3060699..3063935	-	1078	117618944	carB	AHA_2723	-	carbamoyl phosphate synthase large subunit
2650	 60.42	0	3063952..3065088	-	378	117618924	carA	AHA_2724	-	carbamoyl-phosphate synthase, small subunit
2651	 64.54	0	3065777..3066670	-	297	117618237	dapB	AHA_2725	-	dihydrodipicolinate reductase
2652	 66.22	0	3066900..3068234	+	444	117621100	-	AHA_2726	-	Na+/H+ antiporter family protein
2653	 67.17	0	3068367..3068966	+	199	117621461	-	AHA_2727	-	5,10-methenyltetrahydrofolate synthetase
2654	 61.47	0	3069152..3069805	+	217	117620736	rpiA	AHA_2728	-	ribose 5-phosphate isomerase A
2655	 61.67	0	3069808..3069927	+	39	117619768	-	AHA_2729	-	ribose-5-phosphate isomerase A
2656	 60.13	0	3069896..3070048	+	50	117619355	-	AHA_2730	-	ribose-5-phosphate isomerase A
2657	 59.79	0	3070152..3071489	+	445	117619317	-	AHA_2731	-	D-3-phosphoglycerate dehydrogenase
2658	 62.99	0	3071696..3072076	-	126	117618853	dgkA	AHA_2732	-	diacylglycerol kinase
2659	 64.98	0	3072232..3073296	+	354	162139471	-	AHA_2733	-	phospho-2-dehydro-3-deoxyheptonate aldolase
2660	 66.88	0	3073303..3073761	+	152	117619704	-	AHA_2734	-	aminoglycoside 6'-N-acetyltransferase Iz
2661	 69.60	+1	3073783..3074532	-	249	117621103	-	AHA_2735	-	vitamin B12 import ATP-binding protein BtuD
2662	 69.44	+1	3074555..3075562	-	335	117620632	-	AHA_2736	-	vtamin B12-transporter permease
2663	 64.62	0	3075663..3076394	-	243	117618256	-	AHA_2737	-	extracellular solute-binding protein, putative
2664	 56.58	-1	3076508..3076864	+	118	117617845	-	AHA_2738	-	transmembrane signal peptide protein
2665	 62.98	0	3076925..3078064	+	379	117619466	-	AHA_2739	-	pilus retraction protein PilT
2666	 62.26	0	3078348..3079619	+	423	117618951	glgC-2	AHA_2740	-	glucose-1-phosphate adenylyltransferase
2667	 67.03	0	3079686..3080234	+	182	117618607	-	AHA_2741	-	hypothetical protein
2668	 67.08	0	3080349..3080591	-	80	117620423	-	AHA_2742	-	LuxR family transcriptional regulator
2669	 65.61	0	3080588..3082861	-	757	117618716	feoB	AHA_2743	-	ferrous iron transport protein B
2670	 57.46	0	3082917..3083144	-	75	117620172	-	AHA_2744	-	hypothetical protein
2671	 61.07	0	3083219..3083593	+	124	117619391	yciH	AHA_2745	-	translation initation factor SUI1, putative
2672	 63.98	0	3083850..3084407	+	185	117618751	-	AHA_2746	-	integral membrane protein
2673	 69.10	+1	3084439..3085548	+	369	117618266	-	AHA_2747	-	hypothetical protein
2674	 67.76	+1	3085541..3086548	+	335	117617615	-	AHA_2748	-	hypothetical protein
2675	 67.27	0	3086545..3087042	+	165	117621266	-	AHA_2749	-	hypothetical protein
2676	 65.46	0	3087116..3087862	+	248	117620522	-	AHA_2750	-	hypothetical protein
2677	 61.58	0	3087964..3088710	+	248	117619459	-	AHA_2751	-	hypothetical protein
2678	 68.15	+1	3088772..3089785	-	337	117619016	-	AHA_2752	-	GGDEF domain-containing protein
2679	 59.55	0	3090472..3090780	-	102	117618076	-	AHA_2753	-	hypothetical protein
2680	 30.52	-2	3092623..3094152	+	509	117618520	-	AHA_2754	-	HD domain-containing protein
2681	 66.67	0	3094521..3094703	-	60	117621375	-	AHA_2755	-	hypothetical protein
2682	 62.02	0	3094830..3096206	-	458	117617683	cysS	AHA_2756	-	cysteinyl-tRNA synthetase
2683	 60.24	0	3096397..3096894	+	165	117620903	ppiB	AHA_2757	-	peptidyl-prolyl cis-trans isomerase B
2684	 67.82	+1	3096884..3097579	+	231	117621348	-	AHA_2758	-	HIT family protein, putative
2685	 65.56	0	3097576..3098301	+	241	117619972	lpxH	AHA_2759	-	UDP-2,3-diacylglucosamine hydrolase
2686	 64.78	0	3098388..3099341	-	317	117620456	-	AHA_2760	-	protein NrfD
2687	 65.47	0	3099390..3100058	-	222	117618154	-	AHA_2761	-	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
2688	 66.03	0	3100055..3100684	-	209	117620521	-	AHA_2762	-	formate-dependent nitrite reductase
2689	 58.01	0	3100834..3101445	-	203	117619392	-	AHA_2763	-	cytochrome c553
2690	 62.41	0	3101576..3103807	+	743	117619730	-	AHA_2764	-	deCa-heme c-type cytochrome
2691	 64.61	0	3103864..3104835	+	323	117618857	-	AHA_2765	-	nitrate/TMAO reductase
2692	 64.31	0	3104847..3106838	+	663	117620600	-	AHA_2766	-	outer membrane protein
2693	 64.31	0	3106994..3109075	-	693	117621079	-	AHA_2767	-	chemotaxis transducer, putative
2694	 54.65	-1	3109630..3110919	+	429	117617928	-	AHA_2768	-	methyl-accepting chemotaxis protein
2695	 58.02	0	3111643..3112197	-	184	117618413	pgsA	AHA_2772	-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
2696	 65.48	0	3112501..3114351	-	616	117620499	uvrC	AHA_2773	-	excinuclease ABC, C subunit
2697	 58.76	0	3114540..3115184	-	214	117620574	uvrY	AHA_2774	-	response regulator
2698	 67.45	0	3115397..3116158	-	253	117618893	kdsB	AHA_2775	-	3-deoxy-D-manno-octulosonate cytidylyltransferase
2699	 61.38	0	3116155..3116343	-	62	117619512	-	AHA_2776	-	hypothetical