IslandPath Analysis: Aeromonas hydrophila subsp. hydrophila ATCC 7966



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 62.23   STD DEV: 5.38
Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome - 1..4744448
4122 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2381	 63.24	0	2700719..2702731	-	670	117621062	uvrB	AHA_2448	-	excinuclease ABC subunit B
2382	 64.23	0	2703718..2705403	+	561	117620580	-	AHA_2450	-	hypothetical protein
2383	 63.21	0	2705621..2707153	+	510	117618574	-	AHA_2451	-	lytic transglycosylase, catalytic
2384	 65.01	0	2707384..2708349	+	321	117618965	-	AHA_2452	-	hypothetical protein
2385	 64.50	0	2708392..2708853	+	153	117619166	-	AHA_2453	-	hypothetical protein
2386	 65.30	0	2708863..2710395	+	510	117617789	-	AHA_2454	-	TctA protein
2387	 69.97	+1	2710474..2711139	-	221	117620740	-	AHA_2455	-	transcriptional regulatory protein CitT
2388	 66.04	0	2711140..2712723	-	527	117621232	dpiB	AHA_2456	-	sensor histidine kinase DpiB
2389	 64.89	0	2712720..2713955	-	411	117619637	-	AHA_2457	-	Mlc protein
2390	 64.09	0	2714063..2715730	-	555	117620060	-	AHA_2458	-	methyl-accepting chemotaxis protein
2391	 61.98	0	2715742..2716317	+	191	117619771	-	AHA_2459	-	SecC motif-containing protein
2392	 65.42	0	2716511..2718190	+	559	117620483	glpA	AHA_2460	-	sn-glycerol-3-phosphate dehydrogenase subunit A
2393	 67.53	0	2718180..2719460	+	426	117618810	-	AHA_2461	-	anaerobic glycerol-3-phosphate dehydrogenase subunit B
2394	 61.35	0	2719512..2720714	+	400	117619508	glpC	AHA_2462	-	sn-glycerol-3-phosphate dehydrogenase subunit C
2395	 64.28	0	2720802..2731490	-	3562	117617760	-	AHA_2463	-	type I secretion target GGXGXDXXX repeat-containing protein
2396	 63.42	0	2732209..2733654	+	481	117618319	nrfA	AHA_2464	-	cytochrome c nitrite reductase
2397	 62.28	0	2733706..2734320	+	204	117620674	-	AHA_2465	-	cytochrome c-type protein NrfB
2398	 63.64	0	2734317..2735009	+	230	117621271	-	AHA_2466	-	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
2399	 62.90	0	2735006..2735962	+	318	117620614	-	AHA_2467	-	protein NrfD
2400	 66.36	0	2736112..2738073	+	653	117621267	ccmF-2	AHA_2468	-	cytochrome c-type biogenesis protein CcmF
2401	 66.33	0	2738070..2738669	+	199	117620509	-	AHA_2469	-	thiol:disulfide interchange protein DsbE
2402	 68.26	+1	2738666..2739856	+	396	117620024	-	AHA_2470	-	formate-dependent nitrite reductase complex NrfF subunit
2403	 62.72	0	2739994..2740449	+	151	117619496	-	AHA_2471	-	MutT/nudix family protein
2404	 63.84	0	2740852..2741772	+	306	117618941	-	AHA_2472	-	D-alanyl-D-alanine carboxypeptidase family protein
2405	 70.34	+1	2741866..2743416	-	516	117618336	-	AHA_2473	-	dimodular nonribosomal peptide synthetase
2406	 67.07	0	2743413..2749607	-	2064	117617721	-	AHA_2474	-	nonribosomal peptide synthetase
2407	 68.27	+1	2749724..2750473	-	249	117618245	-	AHA_2475	-	2,3-dihydroxybenzoate-2,3-dehydrogenase
2408	 67.41	0	2750503..2753604	-	1033	117621291	-	AHA_2476	-	nonribosomal peptide synthetase
2409	 64.83	0	2753601..2754524	-	307	117620709	-	AHA_2477	-	isochorismatase
2410	 66.73	0	2754548..2756209	-	553	117620119	entE	AHA_2478	-	enterobactin synthase subunit E
2411	 66.50	0	2756286..2757479	-	397	117619131	-	AHA_2479	-	isochorismate synthases
2412	 62.86	0	2757805..2758356	+	183	117618633	-	AHA_2480	-	hypothetical protein
2413	 65.07	0	2758502..2760502	+	666	117619594	-	AHA_2481	-	hypothetical protein
2414	 62.12	0	2760580..2761854	-	424	117620025	glgC-1	AHA_2482	-	glucose-1-phosphate adenylyltransferase
2415	 63.07	0	2762043..2763683	+	546	117618894	-	AHA_2484	-	GGDEF/eal domain-containing protein
2416	 60.40	0	2763646..2764140	-	164	117619591	-	AHA_2483	-	hypothetical protein
2417	 58.68	0	2764309..2764671	-	120	117618424	-	AHA_2485	-	hypothetical protein
2418	 63.45	0	2764858..2766162	-	434	117617752	-	AHA_2486	-	inosine-guanosine kinase
2419	 66.67	0	2766342..2766734	-	130	117621398	-	AHA_2487	-	hypothetical protein
2420	 63.35	0	2766807..2767832	-	341	117620570	hemH	AHA_2488	-	ferrochelatase
2421	 60.93	0	2767896..2768540	-	214	117620262	-	AHA_2489	-	adenylate kinase
2422	 61.06	0	2768795..2770720	-	641	117620628	htpG	AHA_2490	-	heat shock protein 90
2423	 65.51	0	2770954..2771556	-	200	117620825	recR	AHA_2491	-	recombination protein RecR
2424	 66.78	0	2771682..2772539	-	285	117621413	fdhD-2	AHA_2492	-	formate dehydrogenase family accessory protein FdhD
2425	 63.33	0	2772551..2774680	-	709	117617665	-	AHA_2493	-	formate hydrogenlyase transcriptional activator
2426	 53.63	-1	2775035..2775433	-	132	117617975	-	AHA_2494	-	hypothetical protein
2427	 62.14	0	2775515..2777659	-	714	117618564	fdhA	AHA_2495	-	formate dehydrogenase, alpha subunit, selenocysteine-containing
2428	 65.33	0	2777706..2778305	-	199	117620413	-	AHA_2496	-	iron-sulfur cluster-binding protein
2429	 31.56	-2	2779070..2780818	+	582	117618788	-	AHA_2497	-	hypothetical protein
2430	 63.67	0	2781291..2783159	+	622	117621412	trkD	AHA_2498	-	potassium transport protein Kup
2431	 64.86	0	2783748..2784413	+	221	117619673	hyfA	AHA_2499	-	hydrogenase-4 component A
2432	 64.16	0	2784413..2786284	+	623	117619567	-	AHA_2500	-	hydrogenase 4 subunit B
2433	 64.36	0	2786286..2787239	+	317	117619501	-	AHA_2501	-	hydrogenase-4 component C
2434	 63.18	0	2787320..2789038	+	572	117618926	-	AHA_2502	-	hydrogenase-4 component G
2435	 63.98	0	2789048..2789605	+	185	117617630	-	AHA_2503	-	hydrogenase-4 component H
2436	 64.09	0	2789605..2790420	+	271	117617723	-	AHA_2504	-	hydrogenase-4 component I
2437	 58.70	0	2790413..2790826	+	137	117620555	-	AHA_2505	-	formate hydrogenlyase maturation protein HycH
2438	 58.43	0	2790826..2791335	+	169	117618210	hycI	AHA_2506	-	hydrogenase 3 maturation protease
2439	 64.02	0	2791890..2793326	+	478	117618180	selA	AHA_2508	-	selenocysteine synthase
2440	 64.38	0	2793331..2795214	+	627	117618347	selB	AHA_2509	-	selenocysteine-specific translation elongation factor
2441	 64.62	0	2795211..2797649	+	812	117621137	hypF	AHA_2510	-	[NiFe] hydrogenase maturation protein HypF
2442	 58.73	0	2797655..2797906	+	83	117621569	hypC	AHA_2511	-	hydrogenase assembly chaperone HypC/HupF
2443	 63.63	0	2797900..2799018	+	372	117619804	hypD	AHA_2512	-	hydrogenase expression/formation protein HypD
2444	 63.18	0	2799015..2800019	+	334	117620330	hypE	AHA_2513	-	hydrogenase expression/formation protein HypE
2445	 62.57	0	2800089..2800430	+	113	117619238	hypA	AHA_2514	-	hydrogenase nickel insertion protein HypA
2446	 60.62	0	2800432..2801523	+	363	117617567	-	AHA_2515	-	hydrogenase nickel incorporation protein HypB
2447	 64.33	0	2801859..2802500	-	213	117618094	-	AHA_2516	-	ATPase protein DppE
2448	 67.43	0	2802500..2803288	-	262	117618188	-	AHA_2517	-	ABC nickel/di-oligopepetide transporter, ATP binding subunit
2449	 66.17	0	2803392..2804204	-	270	117618761	-	AHA_2518	-	ABC nickel/di-oligopepetide transporter, permease subunit
2450	 64.08	0	2804194..2805198	-	334	117621089	-	AHA_2519	-	ABC nickel/di-oligopepetide transporter, permease subunit
2451	 64.22	0	2805183..2806814	-	543	117618545	-	AHA_2520	-	ABC transporter, periplasmic nickel/di-oligopepetide binding protein
2452	 66.48	0	2806922..2807470	-	182	117619092	-	AHA_2521	-	hydrogenase 2-specific chaperone
2453	 66.48	0	2807452..2807982	-	176	117617881	hybD	AHA_2522	-	hydrogenase 2 maturation endopeptidase
2454	 62.85	0	2807982..2809685	-	567	117618428	hybC	AHA_2523	-	hydrogenase 2 large subunit
2455	 61.03	0	2809682..2810869	-	395	117620798	-	AHA_2524	-	putative hydrogenase 2 b cytochrome subunit
2456	 63.94	0	2810862..2811887	-	341	117621401	-	AHA_2525	-	hydrogenase 2 protein HybA
2457	 64.29	0	2811890..2813023	-	377	117621173	-	AHA_2526	-	hydrogenase 2 small subunit
2458	 60.98	0	2813759..2814127	+	122	117619711	-	AHA_2527	-	hypothetical protein
2459	 64.17	0	2814124..2814444	+	106	117620108	-	AHA_2528	-	anti-anti-sigma factor family protein
2460	 64.86	0	2814431..2816587	+	718	117618587	-	AHA_2529	-	putative chemotaxis protein
2461	 62.85	0	2816631..2818307	+	558	117618733	-	AHA_2530	-	methyl-accepting chemotaxis protein
2462	 64.77	0	2818317..2818844	+	175	117619301	cheW-3	AHA_2531	-	chemotaxis protein CheW
2463	 64.24	0	2818847..2819710	+	287	117617867	cheR-2	AHA_2532	-	CheR methyltransferase SAM binding domain-containing protein
2464	 65.46	0	2819707..2820783	+	358	117618434	cheB-3	AHA_2533	-	chemotaxis-specific methylesterase
2465	 59.31	0	2820786..2821994	+	402	117621114	-	AHA_2534	-	response regulator
2466	 62.38	0	2822106..2823737	+	543	117619653	-	AHA_2535	-	methyl-accepting chemotaxis protein
2467	 65.32	0	2824216..2825325	+	369	117620242	alr-2	AHA_2536	-	alanine racemase
2468	 66.52	0	2825475..2826170	-	231	117618790	-	AHA_2537	-	hypothetical protein
2469	 66.33	0	2826214..2826816	+	200	117619340	-	AHA_2538	-	Cro/CI family transcriptional regulator
2470	 64.93	0	2827250..2829091	-	613	117617852	-	AHA_2540	-	putative sulfate transporter YchM
2471	 57.61	0	2829840..2830325	+	161	117617948	-	AHA_2543	-	hypothetical protein
2472	 64.89	0	2830443..2830892	+	149	117618179	-	AHA_2544	-	hypothetical protein
2473	 65.11	0	2830975..2833866	+	963	117620526	-	AHA_2545	-	hypothetical protein
2474	 62.15	0	2833866..2834684	+	272	117619689	-	AHA_2546	-	hypothetical protein
2475	 61.66	0	2834709..2836205	+	498	117620254	-	AHA_2547	-	hypothetical protein
2476	 66.13	0	2836353..2836913	+	186	117620463	-	AHA_2548	-	hypothetical protein
2477	 68.15	+1	2837093..2838376	+	427	117618765	-	AHA_2549	-	hypothetical protein
2478	 66.25	0	2838428..2839618	+	396	117617492	-	AHA_2550	-	bicyclomycin resistance protein
2479	 61.54	0	2839716..2840183	-	155	117619100	-	AHA_2551	-	hypothetical protein
2480	 65.31	0	2840204..2841016	+	27