IslandPathversion 1.0

IslandPath Analysis: Aeromonas hydrophila subsp. hydrophila ATCC 7966



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 62.23 STD DEV: 5.38
Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome - 1..4744448
4122 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2262	 53.54	-1	2566548..2566844	-	98	117618302	ihfA	AHA_2321	-	integration host factor, alpha subunit
2263	 61.74	0	2566848..2569244	-	798	117617875	pheT	AHA_2322	-	phenylalanyl-tRNA synthetase, beta subunit
2264	 59.76	0	2569257..2570240	-	327	117618676	pheS	AHA_2323	-	phenylalanyl-tRNA synthetase, alpha subunit
2265	 55.18	-1	2570557..2570913	-	118	117618760	rplT	AHA_2324	-	ribosomal protein L20
2266	 54.04	-1	2570929..2571126	-	65	117618221	rpmI	AHA_2325	-	ribosomal protein L35
2267	 52.94	-1	2571213..2571620	-	135	117619989	infC	AHA_2326	-	translation initiation factor IF-3
2268	 58.16	0	2571765..2573693	-	642	117621181	thrS	AHA_2327	-	threonyl-tRNA synthetase
2269	 64.22	0	2573930..2574583	-	217	117620643	-	AHA_2328	-	TPR repeat-containing protein
2270	 64.59	0	2574692..2575750	+	352	117618253	-	AHA_2329	-	radical SAM domain-containing protein
2271	 60.66	0	2576258..2579005	-	915	117617684	gyrA	AHA_2330	-	DNA gyrase, A subunit
2272	 64.32	0	2579156..2579923	+	255	117618918	ubiG	AHA_2331	-	ubiquinone biosynthesis O-methyltransferase
2273	 66.67	0	2579923..2580609	+	228	117618312	gph-1	AHA_2332	-	phosphoglycolate phosphatase
2274	 59.72	0	2581152..2583455	+	767	117620066	nrdA	AHA_2333	-	ribonucleotide-diphosphate reductase subunit alpha
2275	 59.88	0	2583522..2584655	+	377	117619492	nrdB	AHA_2334	-	ribonucleotide-diphosphate reductase subunit beta
2276	 66.26	0	2584727..2584972	+	81	117617746	-	AHA_2335	-	iron-sulfur cluster-binding protein
2277	 63.37	0	2585091..2586242	-	383	117618206	mltA	AHA_2336	-	murein transglycosylase A
2278	 63.10	0	2586393..2586644	+	83	117618688	-	AHA_2337	-	MutT/nudix family protein
2279	 64.16	0	2586669..2587826	-	385	117619137	-	AHA_2338	-	mannose-6-phosphate isomerase
2280	 63.13	0	2587912..2588760	-	282	117619939	-	AHA_2339	-	fructose permease IID component
2281	 61.82	0	2588760..2589563	-	267	117620501	-	AHA_2340	-	PTS system, fructose(mannose)-specific IIC
2282	 61.82	0	2589576..2590070	-	164	117619920	-	AHA_2341	-	pts system mannose-specific eiiab component (eiiab-man)
2283	 66.90	0	2590080..2590511	-	143	117620473	-	AHA_2342	-	PTS system mannose/fructose/sorbose family IIA subunit
2284	 65.03	0	2590517..2592283	-	588	117620807	-	AHA_2343	-	hypothetical protein
2285	 65.47	0	2592505..2593503	+	332	117621437	malI-2	AHA_2344	-	maltose regulon regulatory protein MalI
2286	 65.61	0	2593525..2594094	-	189	117618731	-	AHA_2345	-	glucose-6-phosphate isomerase
2287	 63.71	0	2594283..2596007	-	574	117621519	fruA	AHA_2346	-	PTS system, fructose-specific, IIBC component
2288	 64.85	0	2596004..2596993	-	329	117617699	-	AHA_2347	-	1-phosphofructokinase
2289	 66.30	0	2596993..2598093	-	366	117618288	-	AHA_2348	-	bifunctional fructose-specific PTS IIA/HPr protein
2290	 64.84	0	2598402..2599385	+	327	117618595	fruR	AHA_2349	-	DNA-binding transcriptional regulator FruR
2291	 66.58	0	2599692..2600885	+	397	117619230	-	AHA_2350	-	tyrosine-specific transport protein
2292	 59.51	0	2601147..2601551	+	134	117618572	-	AHA_2351	-	hypothetical protein
2293	 63.91	0	2601551..2602240	+	229	117619037	-	AHA_2352	-	hypothetical protein
2294	 65.88	0	2602347..2603747	-	466	117621566	-	AHA_2353	-	putative ATP-dependent RNA helicase RhlE
2295	 66.42	0	2604071..2604886	+	271	117619767	-	AHA_2354	-	extracellular solute-binding protein
2296	 64.10	0	2604987..2606075	-	362	117618286	aroC	AHA_2355	-	chorismate synthase
2297	 61.32	0	2606088..2607023	-	311	117619640	-	AHA_2356	-	N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
2298	 58.29	0	2607089..2607613	+	174	117617527	-	AHA_2357	-	Smr/MutS family protein
2299	 63.75	0	2607712..2608122	-	136	117620881	-	AHA_2358	-	hypothetical protein
2300	 62.96	0	2608344..2609639	+	431	117618387	-	AHA_2359	-	sensory box protein
2301	 68.73	+1	2609693..2610322	-	209	117619743	-	AHA_2360	-	phosphoglycerate mutase
2302	 60.40	0	2610372..2610770	-	132	117621349	-	AHA_2361	-	hypothetical protein
2303	 59.58	0	2610907..2611287	-	126	117618819	-	AHA_2362	-	glyoxalase family protein
2304	 60.25	0	2611743..2613191	-	482	117620300	-	AHA_2363	-	carbohydrate binding domain-containing protein
2305	 66.42	0	2613508..2614737	-	409	117620496	-	AHA_2364	-	hypothetical protein
2306	 61.47	0	2614888..2615541	+	217	117620920	-	AHA_2365	-	PhnA protein
2307	 45.37	-2	2615783..2615890	+	35	117619474	-	AHA_2366	-	hypothetical protein
2308	 64.95	0	2616212..2617489	+	425	117618889	-	AHA_2367	-	hypothetical protein
2309	 67.00	0	2617562..2618449	-	295	117618260	-	AHA_2368	-	putative phenazine biosynthesis protein PhzF
2310	 60.29	0	2618930..2619760	-	276	117619266	-	AHA_2369	-	hypothetical protein
2311	 50.98	-2	2619757..2620266	-	169	117620725	-	AHA_2370	-	Vco28
2312	 56.79	-1	2620319..2620804	-	161	117618192	-	AHA_2371	-	putative acetyltransferase
2313	 49.84	-2	2620872..2621483	-	203	117619999	-	AHA_2372	-	ThiJ/pfpI family protein
2314	 55.69	-1	2621548..2622048	-	166	117621144	def	AHA_2373	-	peptide deformylase
2315	 58.33	0	2622075..2622530	-	151	117621316	-	AHA_2374	-	histone acetyltransferase HPA2
2316	 62.21	0	2622834..2623259	-	141	117619421	-	AHA_2375	-	antibiotic biosynthesis monooxygenase family protein
2317	 65.08	0	2623289..2623666	-	125	117619427	-	AHA_2376	-	RplA family protein
2318	 63.89	0	2623859..2628286	-	1475	117618952	mukB	AHA_2377	-	cell division protein MukB
2319	 60.98	0	2628314..2629051	-	245	117618332	-	AHA_2378	-	condesin subunit E
2320	 61.89	0	2629032..2630351	-	439	117621233	-	AHA_2379	-	condesin subunit F
2321	 60.49	0	2630429..2631205	-	258	117620256	-	AHA_2380	-	SmtA protein
2322	 63.59	0	2631496..2632275	+	259	117619411	-	AHA_2381	-	integral membrane protein
2323	 61.38	0	2632411..2633166	+	251	117618960	tpiA-1	AHA_2382	-	triosephosphate isomerase
2324	 61.32	0	2633314..2634285	+	323	117618971	pfkA	AHA_2383	-	6-phosphofructokinase
2325	 65.63	0	2635487..2636743	+	418	117618852	-	AHA_2384	-	M20D family peptidase
2326	 63.00	0	2636825..2637505	-	226	117617782	-	AHA_2385	-	HAD-superfamily (subfamily IA) hydrolase
2327	 65.93	0	2637514..2639010	-	498	117621471	-	AHA_2386	-	cytosol aminopeptidase
2328	 64.58	0	2640664..2642727	+	687	117621011	glgX-1	AHA_2395	-	glycogen debranching enzyme GlgX
2329	 68.47	+1	2642798..2643517	-	239	117620599	-	AHA_2396	-	hypothetical protein
2330	 65.69	0	2643727..2645364	-	545	117619202	-	AHA_2397	-	homology with RecF protein
2331	 67.68	+1	2645626..2646513	-	295	117618680	-	AHA_2398	-	helix-turn-helix, AraC type
2332	 65.52	0	2646549..2647592	+	347	117618261	-	AHA_2399	-	membrane protein
2333	 68.65	+1	2647650..2648504	+	284	117621346	-	AHA_2400	-	LysR family transcriptional regulator
2334	 64.23	0	2648588..2649367	-	259	117617625	-	AHA_2401	-	hypothetical protein
2335	 66.80	0	2649575..2650336	-	253	117620945	-	AHA_2402	-	DTW protein
2336	 64.73	0	2650504..2650917	+	137	117620583	-	AHA_2403	-	27 kDa antigen Cfp30B
2337	 61.72	0	2650996..2651985	-	329	117619780	ddl	AHA_2404	-	D-alanyl-alanine synthetase A
2338	 63.07	0	2652186..2652881	-	231	117620447	-	AHA_2405	-	SM-20 domain-containing protein
2339	 61.43	0	2653082..2653558	+	158	117618617	-	AHA_2406	-	peroxiredoxin HYR1
2340	 65.66	0	2653718..2655103	+	461	117619321	-	AHA_2407	-	putative ATP-dependent RNA helicase RhlE
2341	 66.24	0	2655155..2655619	-	154	117617476	-	AHA_2408	-	GMP synthase (glutamine-hydrolyzing)
2342	 67.07	0	2655637..2656128	-	163	117618064	-	AHA_2409	-	acetyltransferase
2343	 65.17	0	2656162..2656494	-	110	117618628	-	AHA_2410	-	hypothetical protein
2344	 65.48	0	2656667..2657512	-	281	117621472	-	AHA_2411	-	hypothetical protein
2345	 63.00	0	2657869..2658441	+	190	117619864	-	AHA_2412	-	adenylate cyclase
2346	 64.81	0	2658399..2658830	+	143	117620316	-	AHA_2413	-	nudix family protein, MutT subfamily
2347	 66.47	0	2659000..2659506	+	168	117619207	-	AHA_2414	-	acetyltransferase
2348	 63.73	0	2659567..2660892	+	441	117619733	gldA	AHA_2415	-	glycerol dehydrogenase
2349	 62.09	0	2661009..2661314	+	101	117618123	-	AHA_2416	-	antibiotic biosynthesis monooxygenase family protein
2350	 64.00	0	2661521..2662384	-	287	117618597	pdxY-2	AHA_2417	-	pyridoxal kinase
2351	 66.67	0	2662991..2663746	-	251	117617678	-	AHA_2418	-	hypothetical protein
2352	 60.99	0	2663825..2664388	-	187	117618111	-	AHA_2419	-	hypothetical protein
2353	 62.68	0	2664707..2665057	+	116	117620445	-	AHA_2420	-	PHA granule-associated protein
2354	 64.37	0	2665151..2666935	+	594	117617651	-	AHA_2421	-	poly-beta-hydroxybutyrate polymerase
2355	 66.17	0	2666932..2667336	+	134	117618527	-	AHA_2422	-	enoyl-CoA hydratase
2356	 58.97	0	2667526..2667759	+	77	117618132	-	AHA_2423	-	hypothetical protein
2357	 61.27	0	2668020..2668556	-	178	117620461	-	AHA_2424	-	hypothetical protein
2358	 64.95	0	2668644..2670395	-	583	117619962	-	AHA_2425	-	drug efflux ABC transporter ATP-binding and permease subunits
2359	 58.12	0	2670392..2670508	-	38	117620995	-	AHA_2426	-	hypothetical protein
2360	 63.90	0	2670505..2672241	-	578	117620443	-	AHA_2427	-	ABC transporter, ATP-binding protein
2361	 61.28	0	2672383..2675184	-	933	117617779	-	AHA_2428	-	sensory box histidine kinase/response regulator
62.23	MEAN

5.38	STD DEV



Last Updated: Dec 04, 2008