IslandPath Analysis: Aeromonas hydrophila subsp. hydrophila ATCC 7966



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 62.23   STD DEV: 5.38
Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome - 1..4744448
4122 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2203	 57.78	0	2493410..2493679	+	89	117617454	-	AHA_2261	-	hypothetical protein
2204	 60.71	0	2493900..2495510	-	536	117621518	yebU	AHA_2262	-	rRNA (cytosine-C(5)-)-methyltransferase RsmF
2205	 65.14	0	2495458..2498010	-	850	117618647	-	AHA_2263	-	paraquat-inducible protein B
2206	 64.30	0	2499438..2500325	+	295	117619773	prpB	AHA_2265	-	2-methylisocitrate lyase
2207	 65.87	0	2500337..2501464	+	375	117618848	-	AHA_2266	-	2-methylcitrate synthase
2208	 64.45	0	2501594..2503039	+	481	117619405	prpD	AHA_2267	-	2-methylcitrate dehydratase
2209	 63.44	0	2503124..2503867	-	247	117617559	-	AHA_2268	-	hypothetical protein
2210	 60.05	0	2504067..2504444	+	125	117617911	-	AHA_2269	-	putative polyhydroxyalkanoic acid system protein
2211	 64.21	0	2504725..2506149	+	474	117618469	-	AHA_2270	-	hypothetical protein
2212	 63.80	0	2506265..2507065	-	266	117617859	-	AHA_2271	-	TPR repeat-containing protein
2213	 62.52	0	2507108..2507758	-	216	117619108	-	AHA_2272	-	TetR family transcriptional regulator
2214	 64.73	0	2507760..2508944	-	394	117619680	-	AHA_2273	-	patatin family phospholipase
2215	 59.93	0	2509033..2509611	-	192	117618207	-	AHA_2274	-	PhaF
2216	 62.80	0	2509917..2511830	+	637	117618797	-	AHA_2275	-	short chain dehydrogenase
2217	 66.23	0	2511880..2512803	-	307	117618112	-	AHA_2276	-	putative lipase transmembrane protein
2218	 57.78	0	2512950..2513264	+	104	117618388	-	AHA_2277	-	DNA damage-inducible gene in SOS regulon, dependent on cyclic AMP and H-NS
2219	 59.62	0	2513543..2514820	+	425	117617919	-	AHA_2278	-	phage integrase family site specific recombinase
2220	 58.64	0	2515032..2517011	+	659	117621259	-	AHA_2279	-	S16 family peptidase
2221	 57.40	0	2517093..2517653	+	186	117620689	fabA	AHA_2280	-	3-hydroxydecanoyl-(acyl carrier protein) dehydratase
2222	 56.50	-1	2517736..2517912	-	58	117620123	-	AHA_2281	-	hypothetical protein
2223	 60.20	0	2518076..2519713	-	545	117619571	-	AHA_2282	-	hypothetical protein
2224	 60.22	0	2519722..2521644	-	640	117619778	uup	AHA_2283	-	ABC transporter ATP-binding protein
2225	 65.37	0	2521719..2521949	-	76	117619482	-	AHA_2284	-	thiol-disulfide isomerase and thioredoxin
2226	 60.70	0	2521949..2524111	-	720	117618670	-	AHA_2285	-	23S rRNA m(2)G2445 methyltransferase
2227	 52.89	-1	2524817..2525353	-	178	117620054	-	AHA_2286	-	hypothetical protein
2228	 55.59	-1	2525441..2526451	-	336	117619397	pyrD	AHA_2287	-	dihydroorotate dehydrogenase 2
2229	 61.98	0	2526528..2531366	-	1612	117617862	-	AHA_2288	-	NAD-glutamate dehydrogenase
2230	 54.05	-1	2531645..2531866	-	73	117617737	-	AHA_2289	-	hypothetical protein
2231	 63.20	0	2531939..2534563	-	874	117617602	pepN	AHA_2290	-	aminopeptidase N
2232	 59.18	0	2534698..2536713	-	671	117621419	prc	AHA_2291	-	carboxy-terminal protease
2233	 58.37	0	2536722..2537360	-	212	117620817	proQ	AHA_2292	-	putative solute/DNA competence effector
2234	 58.17	0	2537462..2537920	-	152	117621139	-	AHA_2293	-	GAF domain-containing protein
2235	 59.48	0	2538031..2538489	-	152	117619674	-	AHA_2294	-	hypothetical protein
2236	 58.55	0	2538707..2540197	+	496	117618956	ccoN	AHA_2295	-	cytochrome c oxidase, Cbb3-type, subunit I
2237	 61.30	0	2540214..2540828	+	204	117617933	ccoO	AHA_2296	-	cytochrome c oxidase, Cbb3-type, subunit II
2238	 53.89	-1	2540841..2541020	+	59	117619988	ccoQ	AHA_2297	-	cytochrome c oxidase, cbb3-type, CcoQ subunit
2239	 61.31	0	2541020..2542009	+	329	117619315	ccoP	AHA_2298	-	cytochrome c oxidase, cbb3-type, subunit III
2240	 61.35	0	2542128..2542616	+	162	117620886	-	AHA_2299	-	hypothetical protein
2241	 65.79	0	2542709..2545108	+	799	117619681	-	AHA_2300	-	copper-translocating P-type ATPase
2242	 57.29	0	2545237..2545428	+	63	117617590	ccoS	AHA_2301	-	cytochrome oxidase maturation protein, cbb3-type
2243	 65.79	0	2545412..2546098	+	228	117617772	-	AHA_2302	-	integral membrane protein
2244	 59.66	0	2546167..2546922	+	251	117619303	fnr	AHA_2303	-	fumarate/nitrate reduction transcriptional regulator
2245	 61.48	0	2547057..2548001	+	314	117618929	-	AHA_2304	-	universal stress protein UspE
2246	 59.74	0	2548069..2548977	+	302	117619906	-	AHA_2305	-	tRNA s2C32 biosynthesis protein TtcA
2247	 63.72	0	2549062..2549739	-	225	117618539	-	AHA_2306	-	hypothetical protein
2248	 62.09	0	2549811..2550575	-	254	117620425	-	AHA_2307	-	hypothetical protein
2249	 67.15	0	2550817..2551434	+	205	117620130	-	AHA_2308	-	glutathione S-transferase
2250	 64.29	0	2551640..2552059	+	139	117621359	rbsD	AHA_2309	-	cytoplasmic D-ribose-binding protein RbsD
2251	 62.52	0	2552093..2553610	+	505	117620895	rbsA	AHA_2310	-	D-ribose transporter ATP binding protein
2252	 63.46	0	2553607..2554572	+	321	117618883	rbsC	AHA_2311	-	ribose ABC transporter permease protein
2253	 64.61	0	2554594..2555469	+	291	117618162	rbsB	AHA_2312	-	D-ribose transporter subunit RbsB
2254	 65.59	0	2555577..2556509	+	310	117619763	rbsK	AHA_2313	-	ribokinase
2255	 65.47	0	2556509..2557513	+	334	117619074	-	AHA_2314	-	LacI family transcription regulator
2256	 65.64	0	2557609..2559261	-	550	117621068	-	AHA_2315	-	GGDEF family protein, putative
2257	 66.04	0	2559258..2559734	-	158	117618160	-	AHA_2316	-	hypothetical protein
2258	 65.37	0	2559824..2560597	-	257	117620126	-	AHA_2317	-	putative nicotinic acid mononucleotide:5, 6-dimethylbenzimidazole(DMB)phosphoribosyltransferase
2259	 69.33	+1	2560682..2561281	-	199	117619526	-	AHA_2318	-	acetyltransferase
2260	 66.27	0	2561285..2562532	-	415	117621568	-	AHA_2319	-	response regulator receiver domain-containing protein
2261	 65.60	0	2562534..2566457	-	1307	117620577	-	AHA_2320	-	PAS, putative
2262	 53.54	-1	2566548..2566844	-	98	117618302	ihfA	AHA_2321	-	integration host factor, alpha subunit
2263	 61.74	0	2566848..2569244	-	798	117617875	pheT	AHA_2322	-	phenylalanyl-tRNA synthetase, beta subunit
2264	 59.76	0	2569257..2570240	-	327	117618676	pheS	AHA_2323	-	phenylalanyl-tRNA synthetase, alpha subunit
2265	 55.18	-1	2570557..2570913	-	118	117618760	rplT	AHA_2324	-	ribosomal protein L20
2266	 54.04	-1	2570929..2571126	-	65	117618221	rpmI	AHA_2325	-	ribosomal protein L35
2267	 52.94	-1	2571213..2571620	-	135	117619989	infC	AHA_2326	-	translation initiation factor IF-3
2268	 58.16	0	2571765..2573693	-	642	117621181	thrS	AHA_2327	-	threonyl-tRNA synthetase
2269	 64.22	0	2573930..2574583	-	217	117620643	-	AHA_2328	-	TPR repeat-containing protein
2270	 64.59	0	2574692..2575750	+	352	117618253	-	AHA_2329	-	radical SAM domain-containing protein
2271	 60.66	0	2576258..2579005	-	915	117617684	gyrA	AHA_2330	-	DNA gyrase, A subunit
2272	 64.32	0	2579156..2579923	+	255	117618918	ubiG	AHA_2331	-	ubiquinone biosynthesis O-methyltransferase
2273	 66.67	0	2579923..2580609	+	228	117618312	gph-1	AHA_2332	-	phosphoglycolate phosphatase
2274	 59.72	0	2581152..2583455	+	767	117620066	nrdA	AHA_2333	-	ribonucleotide-diphosphate reductase subunit alpha
2275	 59.88	0	2583522..2584655	+	377	117619492	nrdB	AHA_2334	-	ribonucleotide-diphosphate reductase subunit beta
2276	 66.26	0	2584727..2584972	+	81	117617746	-	AHA_2335	-	iron-sulfur cluster-binding protein
2277	 63.37	0	2585091..2586242	-	383	117618206	mltA	AHA_2336	-	murein transglycosylase A
2278	 63.10	0	2586393..2586644	+	83	117618688	-	AHA_2337	-	MutT/nudix family protein
2279	 64.16	0	2586669..2587826	-	385	117619137	-	AHA_2338	-	mannose-6-phosphate isomerase
2280	 63.13	0	2587912..2588760	-	282	117619939	-	AHA_2339	-	fructose permease IID component
2281	 61.82	0	2588760..2589563	-	267	117620501	-	AHA_2340	-	PTS system, fructose(mannose)-specific IIC
2282	 61.82	0	2589576..2590070	-	164	117619920	-	AHA_2341	-	pts system mannose-specific eiiab component (eiiab-man)
2283	 66.90	0	2590080..2590511	-	143	117620473	-	AHA_2342	-	PTS system mannose/fructose/sorbose family IIA subunit
2284	 65.03	0	2590517..2592283	-	588	117620807	-	AHA_2343	-	hypothetical protein
2285	 65.47	0	2592505..2593503	+	332	117621437	malI-2	AHA_2344	-	maltose regulon regulatory protein MalI
2286	 65.61	0	2593525..2594094	-	189	117618731	-	AHA_2345	-	glucose-6-phosphate isomerase
2287	 63.71	0	2594283..2596007	-	574	117621519	fruA	AHA_2346	-	PTS system, fructose-specific, IIBC component
2288	 64.85	0	2596004..2596993	-	329	117617699	-	AHA_2347	-	1-phosphofructokinase
2289	 66.30	0	2596993..2598093	-	366	117618288	-	AHA_2348	-	bifunctional fructose-specific PTS IIA/HPr protein
2290	 64.84	0	2598402..2599385	+	327	117618595	fruR	AHA_2349	-	DNA-binding transcriptional regulator FruR
2291	 66.58	0	2599692..2600885	+	397	117619230	-	AHA_2350	-	tyrosine-specific transport protein
2292	 59.51	0	2601147..2601551	+	134	117618572	-	AHA_2351	-	hypothetical protein
2293	 63.91	0	2601551..2602240	+	229	117619037	-	AHA_2352	-	hypothetical protein
2294	 65.88	0	2602347..2603747	-	466	117621566	-	AHA_2353	-	putative ATP-dependent RNA helicase RhlE
2295	 66.42	0	2604071..2604886	+	271	117619767	-	AHA_2354	-	extracellular solute-binding protein
2296	 64.10	0	2604987..2606075	-	362	117618286	aroC	AHA_2355	-	chorismate synthase
2297	 61.32	0	2606088..2607023	-	311	117619640	-	AHA_2356	-	N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
2298	 58.29	0	2607089..2607613	+	174	117617527	-	AHA_2357	-	Smr/MutS family protein
2299	 63.75	0	2607712..2608122	-	136	117620881	-	AHA_2358	-	hypothetical protein
2300	 62.96	0	2608344..2609639	+	431	117618387	-	AHA_2359	-	sensory box protein
2301	 68.73	+1	2609693..2610322	-	209	117619743	-	AHA_2360	-