IslandPath Analysis: Aeromonas hydrophila subsp. hydrophila ATCC 7966



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 62.23   STD DEV: 5.38
Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome - 1..4744448
4122 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2139	 49.02	-2	2423373..2423423	-	16	117620315	-	AHA_2197	-	his operon leader peptide
2140	 60.08	0	2423584..2423826	+	80	117620044	-	AHA_2198	-	hypothetical protein
2141	 62.77	0	2423894..2425816	+	640	117619484	-	AHA_2199	-	ATP-dependent helicase DinG
2142	 50.54	-2	2425813..2425905	+	30	117619335	-	AHA_2200	-	hypothetical protein
2143	 64.79	0	2425935..2426627	+	230	117619386	-	AHA_2201	-	glycoprotease family protein
2144	 63.37	0	2426722..2427237	+	171	117619649	-	AHA_2202	-	Slp family outer membrane lipoprotein
2145	 63.05	0	2427255..2428112	+	285	117618484	-	AHA_2203	-	alpha/beta fold family hydrolase
2146	 58.86	0	2428311..2429987	+	558	117618777	-	AHA_2204	-	long-chain-fatty-acid--CoA ligase
2147	 62.37	0	2430057..2431196	+	379	117620631	rnd	AHA_2205	-	ribonuclease D
2148	 60.74	0	2431244..2432002	-	252	117621119	-	AHA_2206	-	hypothetical protein
2149	 61.52	0	2432097..2432465	-	122	117619741	-	AHA_2207	-	DksA-type zinc finger protein
2150	 62.65	0	2432563..2433507	-	314	117620179	-	AHA_2208	-	tRNA-dihydrouridine synthase C
2151	 62.43	0	2433726..2434103	+	125	117620758	-	AHA_2209	-	hypothetical protein
2152	 59.88	0	2434133..2434780	+	215	117620032	apt	AHA_2210	-	adenine phosphoribosyltransferase
2153	 65.41	0	2434963..2437512	+	849	117620554	dnaX	AHA_2211	-	DNA polymerase III, subunits gamma and tau
2154	 58.18	0	2437628..2437957	+	109	117620231	-	AHA_2212	-	hypothetical protein
2155	 58.50	0	2438143..2439831	-	562	117617621	-	AHA_2213	-	dolichyl-phosphate-mannose-protein mannosyltransferase family protein
2156	 50.88	-2	2440212..2440325	+	37	117621410	-	AHA_2214	-	hypothetical protein
2157	 55.28	-1	2440869..2441939	+	356	117618775	-	AHA_2215	-	transcriptional regulator, LuxR family protein
2158	 61.70	0	2442024..2442446	+	140	117618432	-	AHA_2216	-	CBS domain-containing protein
2159	 61.69	0	2442664..2446563	+	1299	117619026	hrpA	AHA_2217	-	ATP-dependent RNA helicase HrpA
2160	 64.13	0	2446630..2447496	+	288	117618566	-	AHA_2218	-	hypothetical protein
2161	 50.41	-2	2447522..2447890	+	122	117619381	-	AHA_2219	-	ribosomal L25p family protein
2162	 62.93	0	2448084..2451266	+	1060	117618949	-	AHA_2220	-	two-component system sensor protein
2163	 63.77	0	2451263..2452264	+	333	117621536	-	AHA_2222	-	two-component system regulatory protein
2164	 62.48	0	2452254..2452898	-	214	117620793	-	AHA_2221	-	metallo-beta-lactamase family protein
2165	 64.21	0	2452926..2454026	-	366	117619983	-	AHA_2223	-	tRNA 2-selenouridine synthase
2166	 62.62	0	2454023..2455060	-	345	117620533	selD	AHA_2224	-	selenide, water dikinase
2167	 64.14	0	2455446..2456630	-	394	117619204	-	AHA_2225	-	putative acyltransferase
2168	 64.34	0	2456891..2457535	+	214	117617702	-	AHA_2226	-	glutathione S-transferase
2169	 61.35	0	2458017..2459258	-	413	117618137	-	AHA_2227	-	methyltransferase
2170	 53.66	-1	2459558..2461072	+	504	117618016	-	AHA_2228	-	flagellin
2171	 63.73	0	2461230..2462660	-	476	117617935	-	AHA_2229	-	methyl-accepting chemotaxis protein
2172	 64.84	0	2462746..2463018	+	90	117618257	-	AHA_2230	-	acylphosphatase
2173	 65.25	0	2463096..2463731	-	211	117620122	-	AHA_2231	-	putative glutathione S-transferase protein
2174	 60.64	0	2463959..2464921	+	320	117619437	-	AHA_2232	-	hypothetical protein
2175	 60.96	0	2464976..2467009	-	677	117621300	metG	AHA_2233	-	methionyl-tRNA synthetase
2176	 63.25	0	2467196..2468278	+	360	117619578	-	AHA_2234	-	mrp protein
2177	 56.90	0	2468388..2469032	+	214	117618301	udk	AHA_2235	-	uridine kinase
2178	 61.68	0	2469096..2469677	+	193	117620718	dcd	AHA_2236	-	deoxycytidine triphosphate deaminase
2179	 58.06	0	2469711..2469803	-	30	117621193	-	AHA_2237	-	hypothetical protein
2180	 57.82	0	2470085..2471554	+	489	117617566	-	AHA_2238	-	inorganic phosphate transporter
2181	 61.83	0	2472370..2475489	-	1039	117619748	-	AHA_2239	-	ribonuclease E
2182	 59.65	0	2475862..2476845	+	327	117620828	-	AHA_2240	-	ribosomal large subunit pseudouridine synthase C
2183	 64.66	0	2476845..2477492	+	215	117619383	-	AHA_2241	-	HAD family hydrolase
2184	 62.31	0	2477570..2478280	-	236	117619933	maf-2	AHA_2242	-	septum formation protein Maf
2185	 63.65	0	2478335..2479528	+	397	117617858	-	AHA_2243	-	multidrug efflux system protein MdtL
2186	 58.97	0	2479531..2480505	+	324	117618448	-	AHA_2244	-	HTH-type transcriptional regulator YidZ
2187	 65.77	0	2480575..2481240	+	221	117620624	-	AHA_2245	-	hypothetical protein
2188	 50.77	-2	2481489..2482010	+	173	117621211	-	AHA_2246	-	hypothetical protein
2189	 55.36	-1	2482030..2482197	+	55	117621408	rpmF	AHA_2247	-	ribosomal protein L32
2190	 58.92	0	2482207..2483226	+	339	117619661	plsX	AHA_2248	-	fatty acid/phospholipid synthesis protein PlsX
2191	 63.33	0	2483234..2484193	+	319	117617599	fabH	AHA_2249	-	3-oxoacyl-(acyl carrier protein) synthase III
2192	 61.75	0	2484263..2485198	+	311	117618181	fabD	AHA_2250	-	malonyl CoA-acyl carrier protein transacylase
2193	 58.91	0	2485212..2485946	+	244	117618796	fabG	AHA_2251	-	3-oxoacyl-(acyl-carrier-protein) reductase
2194	 45.99	-2	2486104..2486340	+	78	117619497	acpP	AHA_2252	-	acyl carrier protein
2195	 61.27	0	2486423..2487664	+	413	117620422	-	AHA_2253	-	beta-ketoacyl-acyl carrier protein synthase II
2196	 59.88	0	2487684..2488538	+	284	117620073	-	AHA_2254	-	aminodeoxychorismate lyase
2197	 60.64	0	2488618..2489529	+	303	117620575	-	AHA_2255	-	hypothetical protein
2198	 62.46	0	2489529..2490170	+	213	117621308	tmk	AHA_2256	-	thymidylate kinase
2199	 63.40	0	2490155..2491102	+	315	117619310	holB	AHA_2257	-	DNA polymerase III, delta' subunit
2200	 59.49	0	2491124..2491903	+	259	117619240	-	AHA_2258	-	putative deoxyribonuclease YcfH
2201	 58.41	0	2492203..2493231	+	342	117620891	-	AHA_2259	-	phage integrase family protein
2202	 57.43	0	2493392..2493694	-	100	117620468	-	AHA_2260	-	hypothetical protein
2203	 57.78	0	2493410..2493679	+	89	117617454	-	AHA_2261	-	hypothetical protein
2204	 60.71	0	2493900..2495510	-	536	117621518	yebU	AHA_2262	-	rRNA (cytosine-C(5)-)-methyltransferase RsmF
2205	 65.14	0	2495458..2498010	-	850	117618647	-	AHA_2263	-	paraquat-inducible protein B
2206	 64.30	0	2499438..2500325	+	295	117619773	prpB	AHA_2265	-	2-methylisocitrate lyase
2207	 65.87	0	2500337..2501464	+	375	117618848	-	AHA_2266	-	2-methylcitrate synthase
2208	 64.45	0	2501594..2503039	+	481	117619405	prpD	AHA_2267	-	2-methylcitrate dehydratase
2209	 63.44	0	2503124..2503867	-	247	117617559	-	AHA_2268	-	hypothetical protein
2210	 60.05	0	2504067..2504444	+	125	117617911	-	AHA_2269	-	putative polyhydroxyalkanoic acid system protein
2211	 64.21	0	2504725..2506149	+	474	117618469	-	AHA_2270	-	hypothetical protein
2212	 63.80	0	2506265..2507065	-	266	117617859	-	AHA_2271	-	TPR repeat-containing protein
2213	 62.52	0	2507108..2507758	-	216	117619108	-	AHA_2272	-	TetR family transcriptional regulator
2214	 64.73	0	2507760..2508944	-	394	117619680	-	AHA_2273	-	patatin family phospholipase
2215	 59.93	0	2509033..2509611	-	192	117618207	-	AHA_2274	-	PhaF
2216	 62.80	0	2509917..2511830	+	637	117618797	-	AHA_2275	-	short chain dehydrogenase
2217	 66.23	0	2511880..2512803	-	307	117618112	-	AHA_2276	-	putative lipase transmembrane protein
2218	 57.78	0	2512950..2513264	+	104	117618388	-	AHA_2277	-	DNA damage-inducible gene in SOS regulon, dependent on cyclic AMP and H-NS
2219	 59.62	0	2513543..2514820	+	425	117617919	-	AHA_2278	-	phage integrase family site specific recombinase
2220	 58.64	0	2515032..2517011	+	659	117621259	-	AHA_2279	-	S16 family peptidase
2221	 57.40	0	2517093..2517653	+	186	117620689	fabA	AHA_2280	-	3-hydroxydecanoyl-(acyl carrier protein) dehydratase
2222	 56.50	-1	2517736..2517912	-	58	117620123	-	AHA_2281	-	hypothetical protein
2223	 60.20	0	2518076..2519713	-	545	117619571	-	AHA_2282	-	hypothetical protein
2224	 60.22	0	2519722..2521644	-	640	117619778	uup	AHA_2283	-	ABC transporter ATP-binding protein
2225	 65.37	0	2521719..2521949	-	76	117619482	-	AHA_2284	-	thiol-disulfide isomerase and thioredoxin
2226	 60.70	0	2521949..2524111	-	720	117618670	-	AHA_2285	-	23S rRNA m(2)G2445 methyltransferase
2227	 52.89	-1	2524817..2525353	-	178	117620054	-	AHA_2286	-	hypothetical protein
2228	 55.59	-1	2525441..2526451	-	336	117619397	pyrD	AHA_2287	-	dihydroorotate dehydrogenase 2
2229	 61.98	0	2526528..2531366	-	1612	117617862	-	AHA_2288	-	NAD-glutamate dehydrogenase
2230	 54.05	-1	2531645..2531866	-	73	117617737	-	AHA_2289	-	hypothetical protein
2231	 63.20	0	2531939..2534563	-	874	117617602	pepN	AHA_2290	-	aminopeptidase N
2232	 59.18	0	2534698..2536713	-	671	117621419	prc	AHA_2291	-	carboxy-terminal protease
2233	 58.37	0	2536722..2537360	-	212	117620817	proQ	AHA_2292	-	putative solute/DNA competence effector
2234	 58.17	0	2537462..2537920	-	152	117621139	-	AHA_2293	-	GAF domain-containing protein
2235	 59.48	0	2538031..2538489	-	152	117619674	-	AHA_2294	-	hypothetical protein
2236	 58.55	0	2538707..2540197	+	496	117618956	ccoN	AHA_2295	-	cytochrome c oxidase, Cbb3-type, subunit I
2237	 61.30	0	2540214..2540828	+	204	117617933	ccoO	AHA_2296	-	cytochrome c oxidase, Cbb3-type, subunit II
2238	 53.89	-1	2540841..2541020	+	59	117619988	ccoQ	AHA_2297	-	cytochrome c oxidase, cbb3-type, CcoQ subunit
62.23	MEAN

5.38	STD DEV
</