IslandPathversion 1.0

IslandPath Analysis: Aeromonas hydrophila subsp. hydrophila ATCC 7966



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 62.23 STD DEV: 5.38
Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome - 1..4744448
4122 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2084	 66.84	0	2344832..2345995	+	387	117621462	atoB	AHA_2143	-	acetyl-CoA acetyltransferase
2085	 60.38	0	2345992..2347215	-	407	117620787	-	AHA_2142	-	sensory box/GGDEF family protein
2086	 64.60	0	2347345..2348601	-	418	117618313	-	AHA_2144	-	long-chain fatty acid transport protein
2087	 60.12	0	2348855..2350153	-	432	117619468	-	AHA_2145	-	long-chain fatty acid transport protein
2088	 63.84	0	2350564..2351307	-	247	117618908	-	AHA_2146	-	hypothetical protein
2089	 59.05	0	2351300..2351890	-	196	117618563	-	AHA_2147	-	RNA polymerase sigma factor
2090	 69.82	+1	2351924..2353444	-	506	117620053	-	AHA_2148	-	hypothetical protein
2091	 70.20	+1	2353441..2354940	-	499	117620519	-	AHA_2149	-	TPR domain-containing protein
2092	 69.23	+1	2354940..2355953	-	337	117618496	-	AHA_2150	-	von Willebrand factor type A domain-containing protein
2093	 69.52	+1	2356516..2357460	-	314	117619096	-	AHA_2151	-	hypothetical protein
2094	 66.56	0	2357441..2358391	-	316	117619918	-	AHA_2152	-	MoxR protein
2095	 65.14	0	2358585..2359895	+	436	117620475	fadI	AHA_2153	-	3-ketoacyl-CoA thiolase
2096	 65.88	0	2359895..2362042	+	715	117620841	fadJ	AHA_2154	-	multifunctional fatty acid oxidation complex subunit alpha
2097	 56.03	-1	2362338..2362478	+	46	117617650	-	AHA_2155	-	hypothetical protein
2098	 60.83	0	2362578..2363228	+	216	117618105	-	AHA_2156	-	YaeQ
2099	 64.29	0	2363240..2364124	+	294	117618582	-	AHA_2157	-	auxin efflux carrier
2100	 38.23	-2	2365002..2365982	-	326	117618345	-	AHA_2158	-	hypothetical protein
2101	 61.63	0	2366991..2367407	+	138	117619036	-	AHA_2159	-	hypothetical protein
2102	 64.39	0	2367459..2369393	+	644	117617656	-	AHA_2160	-	sigma-54-dependent transcriptional regulator YgeV
2103	 59.26	0	2369822..2371009	+	395	117620823	-	AHA_2161	-	hypothetical protein
2104	 62.00	0	2371137..2372336	+	399	117619541	-	AHA_2162	-	diaminopropionate ammonia-lyase
2105	 61.82	0	2372460..2373677	+	405	162139472	-	AHA_2163	-	peptidase
2106	 64.35	0	2373796..2375220	+	474	117620710	hydA	AHA_2164	-	dihydropyrimidinase
2107	 64.52	0	2375316..2376248	+	310	117621250	arcC-1	AHA_2165	-	carbamate kinase
2108	 65.15	0	2376431..2377354	+	307	117617734	-	AHA_2166	-	inner membrane transport protein YijE
2109	 66.16	0	2377424..2379016	-	530	117618362	-	AHA_2167	-	xanthine dehydrogenase accessory factor
2110	 62.78	0	2379036..2379884	-	282	117618953	-	AHA_2168	-	hypothetical protein
2111	 64.07	0	2379865..2380518	+	217	117618517	-	AHA_2169	-	hypotehtical YgfJ
2112	 61.81	0	2380939..2384049	+	1036	117619188	-	AHA_2170	-	putative selenate reductase subunit YgfK
2113	 62.60	0	2384080..2385408	+	442	117618532	-	AHA_2171	-	putative chlorohydrolase/aminohydrolase
2114	 66.54	0	2385489..2386265	+	258	117620500	-	AHA_2172	-	putative selenate reductase subunit YgfM
2115	 64.46	0	2386262..2389159	+	965	117619598	-	AHA_2173	-	putative selenate reductase subunit YgfN
2116	 64.23	0	2389255..2390772	+	505	117619116	-	AHA_2174	-	xanthine/uracil permease family protein
2117	 61.96	0	2390797..2392113	+	438	117618707	-	AHA_2175	-	guanine deaminase
2118	 66.30	0	2392395..2393771	+	458	117618150	-	AHA_2176	-	xanthine/uracil permease family protein
2119	 64.38	0	2394101..2396419	+	772	117621444	-	AHA_2177	-	xanthine dehydrogenase subunit XdhA
2120	 67.24	0	2396412..2397290	+	292	117620820	-	AHA_2178	-	xanthine dehydrogenase subunit XdhB
2121	 63.58	0	2397287..2397772	+	161	117620497	-	AHA_2179	-	xanthine dehydrogenase subunit XdhC
2122	 65.70	0	2398305..2401523	+	1072	117619940	-	AHA_2180	-	nuclease
2123	 64.84	0	2401661..2402206	-	181	117620887	-	AHA_2181	-	hypothetical protein
2124	 60.85	0	2402710..2402898	+	62	117620460	-	AHA_2182	-	hypothetical protein
2125	 62.02	0	2402958..2404484	-	508	117619987	-	AHA_2183	-	putative transporter
2126	 63.65	0	2405120..2406742	+	540	117621371	-	AHA_2184	-	AMP-binding protein
2127	 40.43	-2	2406798..2408375	+	525	117620871	-	AHA_2185	-	KAP P-loop domain-containing protein
2128	 62.26	0	2408415..2409050	-	211	117617617	-	AHA_2186	-	bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein
2129	 62.40	0	2409043..2409816	-	257	117619306	hisF	AHA_2187	-	imidazole glycerol phosphate synthase subunit HisF
2130	 64.73	0	2409997..2413968	-	1323	117618541	-	AHA_2188	-	PAS
2131	 62.40	0	2413965..2416118	-	717	117620133	-	AHA_2189	-	PAS
2132	 62.88	0	2416111..2417220	-	369	117621097	-	AHA_2190	-	response regulator receiver
2133	 63.71	0	2417386..2418129	-	247	117618364	hisA	AHA_2191	-	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
2134	 62.62	0	2418135..2418776	-	213	117617576	hisH	AHA_2192	-	imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
2135	 63.63	0	2418776..2419927	-	383	117618028	-	AHA_2193	-	imidazole glycerol-phosphate dehydratase/histidinol phosphatase
2136	 64.61	0	2419943..2421013	-	356	117621005	hisC	AHA_2194	-	histidinol-phosphate aminotransferase
2137	 67.35	0	2421010..2422335	-	441	117621484	hisD	AHA_2195	-	histidinol dehydrogenase
2138	 61.76	0	2422348..2423244	-	298	117620320	hisG	AHA_2196	-	ATP phosphoribosyltransferase
2139	 49.02	-2	2423373..2423423	-	16	117620315	-	AHA_2197	-	his operon leader peptide
2140	 60.08	0	2423584..2423826	+	80	117620044	-	AHA_2198	-	hypothetical protein
2141	 62.77	0	2423894..2425816	+	640	117619484	-	AHA_2199	-	ATP-dependent helicase DinG
2142	 50.54	-2	2425813..2425905	+	30	117619335	-	AHA_2200	-	hypothetical protein
2143	 64.79	0	2425935..2426627	+	230	117619386	-	AHA_2201	-	glycoprotease family protein
2144	 63.37	0	2426722..2427237	+	171	117619649	-	AHA_2202	-	Slp family outer membrane lipoprotein
2145	 63.05	0	2427255..2428112	+	285	117618484	-	AHA_2203	-	alpha/beta fold family hydrolase
2146	 58.86	0	2428311..2429987	+	558	117618777	-	AHA_2204	-	long-chain-fatty-acid--CoA ligase
2147	 62.37	0	2430057..2431196	+	379	117620631	rnd	AHA_2205	-	ribonuclease D
2148	 60.74	0	2431244..2432002	-	252	117621119	-	AHA_2206	-	hypothetical protein
2149	 61.52	0	2432097..2432465	-	122	117619741	-	AHA_2207	-	DksA-type zinc finger protein
2150	 62.65	0	2432563..2433507	-	314	117620179	-	AHA_2208	-	tRNA-dihydrouridine synthase C
2151	 62.43	0	2433726..2434103	+	125	117620758	-	AHA_2209	-	hypothetical protein
2152	 59.88	0	2434133..2434780	+	215	117620032	apt	AHA_2210	-	adenine phosphoribosyltransferase
2153	 65.41	0	2434963..2437512	+	849	117620554	dnaX	AHA_2211	-	DNA polymerase III, subunits gamma and tau
2154	 58.18	0	2437628..2437957	+	109	117620231	-	AHA_2212	-	hypothetical protein
2155	 58.50	0	2438143..2439831	-	562	117617621	-	AHA_2213	-	dolichyl-phosphate-mannose-protein mannosyltransferase family protein
2156	 50.88	-2	2440212..2440325	+	37	117621410	-	AHA_2214	-	hypothetical protein
2157	 55.28	-1	2440869..2441939	+	356	117618775	-	AHA_2215	-	transcriptional regulator, LuxR family protein
2158	 61.70	0	2442024..2442446	+	140	117618432	-	AHA_2216	-	CBS domain-containing protein
2159	 61.69	0	2442664..2446563	+	1299	117619026	hrpA	AHA_2217	-	ATP-dependent RNA helicase HrpA
2160	 64.13	0	2446630..2447496	+	288	117618566	-	AHA_2218	-	hypothetical protein
2161	 50.41	-2	2447522..2447890	+	122	117619381	-	AHA_2219	-	ribosomal L25p family protein
2162	 62.93	0	2448084..2451266	+	1060	117618949	-	AHA_2220	-	two-component system sensor protein
2163	 63.77	0	2451263..2452264	+	333	117621536	-	AHA_2222	-	two-component system regulatory protein
2164	 62.48	0	2452254..2452898	-	214	117620793	-	AHA_2221	-	metallo-beta-lactamase family protein
2165	 64.21	0	2452926..2454026	-	366	117619983	-	AHA_2223	-	tRNA 2-selenouridine synthase
2166	 62.62	0	2454023..2455060	-	345	117620533	selD	AHA_2224	-	selenide, water dikinase
2167	 64.14	0	2455446..2456630	-	394	117619204	-	AHA_2225	-	putative acyltransferase
2168	 64.34	0	2456891..2457535	+	214	117617702	-	AHA_2226	-	glutathione S-transferase
2169	 61.35	0	2458017..2459258	-	413	117618137	-	AHA_2227	-	methyltransferase
2170	 53.66	-1	2459558..2461072	+	504	117618016	-	AHA_2228	-	flagellin
2171	 63.73	0	2461230..2462660	-	476	117617935	-	AHA_2229	-	methyl-accepting chemotaxis protein
2172	 64.84	0	2462746..2463018	+	90	117618257	-	AHA_2230	-	acylphosphatase
2173	 65.25	0	2463096..2463731	-	211	117620122	-	AHA_2231	-	putative glutathione S-transferase protein
2174	 60.64	0	2463959..2464921	+	320	117619437	-	AHA_2232	-	hypothetical protein
2175	 60.96	0	2464976..2467009	-	677	117621300	metG	AHA_2233	-	methionyl-tRNA synthetase
2176	 63.25	0	2467196..2468278	+	360	117619578	-	AHA_2234	-	mrp protein
2177	 56.90	0	2468388..2469032	+	214	117618301	udk	AHA_2235	-	uridine kinase
2178	 61.68	0	2469096..2469677	+	193	117620718	dcd	AHA_2236	-	deoxycytidine triphosphate deaminase
2179	 58.06	0	2469711..2469803	-	30	117621193	-	AHA_2237	-	hypothetical protein
2180	 57.82	0	2470085..2471554	+	489	117617566	-	AHA_2238	-	inorganic phosphate transporter
2181	 61.83	0	2472370..2475489	-	1039	117619748	-	AHA_2239	-	ribonuclease E
2182	 59.65	0	2475862..2476845	+	327	117620828	-	AHA_2240	-	ribosomal large subunit pseudouridine synthase C
2183	 64.66	0	2476845..2477492	+	215	117619383	-	AHA_2241	-	HAD family hydrolase
62.23	MEAN

5.38	STD DEV