IslandPath Analysis: Aeromonas hydrophila subsp. hydrophila ATCC 7966



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 62.23   STD DEV: 5.38
Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome - 1..4744448
4122 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1981	 49.71	-2	2239584..2240438	+	284	117619779	-	AHA_2033	-	hypothetical protein
1982	 57.78	0	2241671..2241805	-	44	117621072	-	AHA_2034	-	hypothetical protein
1983	 34.87	-2	2242283..2243191	+	302	117618233	-	AHA_2035	-	putative RNA-dependent DNA polymerase
1984	 36.98	-2	2243181..2244851	+	556	117620939	-	AHA_2036	-	RecF/RecN/SMC family protein
1985	 36.62	-2	2244835..2245503	+	222	117620347	-	AHA_2037	-	hypothetical protein
1986	 50.75	-2	2245549..2246283	+	244	117619787	-	AHA_2038	-	Rha family phage regulatory protein
1987	 59.64	0	2246290..2246730	+	146	117619158	-	AHA_2039	-	NinB protein
1988	 65.09	0	2246727..2247044	+	105	117618084	-	AHA_2040	-	hypothetical protein
1989	 66.19	0	2247041..2247463	+	140	117617644	-	AHA_2041	-	hypothetical protein
1990	 60.83	0	2247460..2248161	+	233	117617719	-	AHA_2042	-	hypothetical protein
1991	 45.91	-2	2248208..2248891	-	227	117618283	-	AHA_2043	-	hypothetical protein
1992	 59.92	0	2248997..2250271	-	424	117619027	umuC	AHA_2044	-	protein UmuC
1993	 56.97	0	2250275..2250697	-	140	117618444	umuD	AHA_2045	-	umuD protein
1994	 46.67	-2	2250885..2251949	+	354	117621292	-	AHA_2046	-	hypothetical protein
1995	 52.07	-1	2252032..2252442	+	136	117619452	-	AHA_2047	-	DNA-binding protein Hns
1996	 41.98	-2	2252526..2252999	+	157	117617659	-	AHA_2048	-	hypothetical protein
1997	 47.71	-2	2253020..2253631	+	203	117620106	-	AHA_2049	-	hypothetical protein
1998	 61.99	0	2253952..2254443	+	163	117618756	-	AHA_2050	-	phage lysozyme
1999	 62.35	0	2254269..2254940	+	223	117619502	-	AHA_2052	-	hypothetical protein
2000	 62.96	0	2254488..2254838	-	116	117620197	-	AHA_2051	-	hypothetical protein
2001	 56.63	-1	2255023..2255919	+	298	117619882	-	AHA_2053	-	putative small subunit bacteriophage terminase
2002	 37.22	-2	2255959..2256705	+	248	117620963	-	AHA_2054	-	hypothetical protein
2003	 53.43	-1	2256773..2257837	+	354	117620548	-	AHA_2055	-	large subunit terminase
2004	 63.41	0	2260336..2261991	-	551	117620226	actP	AHA_2056	-	acetate permease
2005	 59.29	0	2261988..2262299	-	103	117617698	-	AHA_2057	-	hypothetical protein
2006	 66.99	0	2262409..2263035	-	208	117621105	-	AHA_2058	-	DNA polymerase III subunit epsilon
2007	 66.50	0	2263038..2264825	-	595	117617785	-	AHA_2059	-	cyclic nucleotide binding protein/CBS domain-containing proteins
2008	 65.18	0	2265002..2265808	+	268	117621463	-	AHA_2060	-	enoyl-CoA hydratase/isomerase family protein
2009	 59.52	0	2266221..2266472	+	83	117618489	-	AHA_2061	-	phage transcriptional activator, Ogr/Delta, putative
2010	 41.62	-2	2266720..2267709	-	329	117621238	-	AHA_2062	-	hypothetical protein
2011	 42.86	-2	2267696..2270161	-	821	117617841	-	AHA_2063	-	hypothetical protein
2012	 40.76	-2	2270253..2270723	-	156	117618940	-	AHA_2064	-	hypothetical protein
2013	 59.52	0	2270973..2271560	-	195	117619524	-	AHA_2065	-	hypothetical protein
2014	 66.93	0	2271560..2271940	-	126	117619634	-	AHA_2066	-	A protein
2015	 62.27	0	2272025..2273524	-	499	117621085	-	AHA_2067	-	sodium:alanine symporter family protein
2016	 62.69	0	2273674..2274276	+	200	117619224	-	AHA_2068	-	protein PhnO
2017	 65.56	0	2274295..2275104	+	269	117618776	-	AHA_2069	-	hypothetical protein
2018	 60.30	0	2275187..2275783	-	198	117618293	-	AHA_2070	-	GPR1/FUN34/yaaH family membrane protein
2019	 65.49	0	2276469..2279369	-	966	117617962	-	AHA_2071	-	hypothetical protein
2020	 62.20	0	2279418..2280179	-	253	117620922	-	AHA_2072	-	periplasmic binding protein
2021	 61.23	0	2280217..2280639	-	140	117618425	-	AHA_2073	-	MerR family transcriptional regulator
2022	 70.53	+1	2280651..2281607	-	318	117620658	-	AHA_2074	-	hydroxymethylglutaryl-CoA lyase
2023	 68.80	+1	2281604..2283568	-	654	117621084	-	AHA_2075	-	methylcrotonoyl-CoA carboxylase alpha chain
2024	 68.57	+1	2283678..2284517	-	279	117619428	-	AHA_2076	-	enoyl-CoA hydratase/isomerase family protein
2025	 66.60	0	2284527..2286128	-	533	117617791	-	AHA_2077	-	methylcrotonoyl-CoA carboxylase beta chain
2026	 65.19	0	2286125..2287273	-	382	117619749	-	AHA_2078	-	isovaleryl-CoA dehydrogenase 2
2027	 66.67	0	2287520..2289031	+	503	117620150	mmsA-2	AHA_2079	-	methylmalonate-semialdehyde dehydrogenase
2028	 66.18	0	2289031..2290254	+	407	117620593	-	AHA_2080	-	acyl-CoA dehydrogenase
2029	 67.04	0	2290395..2291207	+	270	117621061	-	AHA_2081	-	enoyl-CoA hydratase
2030	 67.84	+1	2291267..2292370	+	367	117617537	-	AHA_2082	-	enoyl-CoA hydratase/isomerase family protein
2031	 67.54	0	2292398..2293318	+	306	117618133	mmsB	AHA_2083	-	3-hydroxyisobutyrate dehydrogenase
2032	 67.19	0	2293390..2294151	+	253	117618981	fabG	AHA_2084	-	3-ketoacyl-(acyl-carrier-protein) reductase
2033	 63.54	0	2294541..2295977	+	478	117619431	-	AHA_2085	-	arginine/ornithine antiporter
2034	 65.78	0	2296068..2296856	+	262	117619625	-	AHA_2086	-	hypothetical protein
2035	 41.64	-2	2297699..2298637	-	312	117620086	-	AHA_2087	-	transcriptional regulator, LysR family protein
2036	 43.50	-2	2299168..2299698	+	176	117621503	-	AHA_2088	-	EAL domain-containing protein
2037	 49.16	-2	2299629..2301302	+	557	117619865	-	AHA_2089	-	cyclic diguanylate phosphodiesterase domain-containing protein
2038	 65.30	0	2301307..2302182	-	291	117618196	-	AHA_2090	-	transcriptional regulator
2039	 63.04	0	2302339..2303772	+	477	117618268	-	AHA_2091	-	beta-glucosidase
2040	 59.16	0	2303883..2305706	-	607	117620444	-	AHA_2092	-	GGDEF family protein
2041	 57.41	0	2305808..2306293	-	161	117618518	-	AHA_2093	-	oxidoreductase molybdopterin binding subunit
2042	 62.95	0	2306540..2307886	+	448	117620930	-	AHA_2094	-	HD domain-containing protein
2043	 65.34	0	2307932..2308687	-	251	117620998	-	AHA_2095	-	reductase
2044	 67.92	+1	2308814..2309767	+	317	117621467	-	AHA_2096	-	LysR family transcriptional regulator
2045	 62.41	0	2309932..2310777	+	281	117619212	-	AHA_2097	-	endonuclease IV
2046	 69.19	+1	2310811..2311800	+	329	117620297	-	AHA_2098	-	oxidoreductase, NAD-binding
2047	 65.68	0	2311915..2312823	-	302	117618740	-	AHA_2099	-	LysR family transcriptional regulator
2048	 63.82	0	2312923..2313906	+	327	117619213	-	AHA_2100	-	tellurite resistance protein
2049	 63.94	0	2314174..2315163	+	329	117617531	msbB	AHA_2101	-	lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase
2050	 62.86	0	2315332..2316330	+	332	117618022	-	AHA_2102	-	lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase
2051	 62.02	0	2316472..2317332	+	286	117619664	-	AHA_2103	-	RIO1 protein
2052	 69.35	+1	2317384..2317941	-	185	117620435	-	AHA_2104	-	acetyltransferase
2053	 67.32	0	2317917..2319290	-	457	117618694	-	AHA_2105	-	GGDEF domain-containing protein
2054	 62.67	0	2319364..2320089	-	241	117619172	-	AHA_2106	-	YbaK/prolyl-tRNA synthetase domain-containing protein
2055	 64.81	0	2320065..2322494	+	809	117621350	polB	AHA_2107	-	DNA polymerase II
2056	 65.29	0	2323361..2324740	-	459	117620009	-	AHA_2114	-	multidrug resistance protein MdtK
2057	 64.25	0	2324887..2325093	-	68	117621028	-	AHA_2115	-	hypothetical protein
2058	 64.89	0	2325224..2325841	+	205	117621475	ribE-1	AHA_2116	-	riboflavin synthase subunit alpha
2059	 60.29	0	2325931..2326134	-	67	117617565	-	AHA_2117	-	hypothetical protein
2060	 63.48	0	2326273..2326932	-	219	117617978	-	AHA_2118	-	2-deoxyglucose-6-phosphatase
2061	 66.58	0	2327059..2328237	-	392	117619791	purT	AHA_2119	-	phosphoribosylglycinamide formyltransferase 2
2062	 64.67	0	2328323..2329273	-	316	117620170	-	AHA_2120	-	drug/metabolite exporter family protein
2063	 59.77	0	2329331..2330026	+	231	117618128	-	AHA_2121	-	acyl carrier protein phosphodiesterase
2064	 66.67	0	2330123..2330299	-	58	117617533	-	AHA_2122	-	hypothetical protein
2065	 53.97	-1	2330466..2330654	-	62	117621548	-	AHA_2123	-	hypothetical protein
2066	 58.55	0	2330651..2331217	-	188	117620973	-	AHA_2124	-	MarR family transcriptional regulator
2067	 66.17	0	2331290..2332504	-	404	117619946	-	AHA_2125	-	hypothetical protein
2068	 65.45	0	2331344..2332579	+	411	117621433	-	AHA_2126	-	hypothetical protein
2069	 60.64	0	2332495..2333589	+	364	117618815	-	AHA_2127	-	nucleic acid binding protein
2070	 67.63	+1	2333590..2333901	+	103	117618618	-	AHA_2128	-	hypothetical protein
2071	 60.08	0	2333943..2334443	-	166	117620339	-	AHA_2129	-	dsDNA-mimic protein
2072	 64.97	0	2334565..2335272	-	235	117620004	mtgA	AHA_2130	-	monofunctional biosynthetic peptidoglycan transglycosylase
2073	 60.19	0	2335326..2335634	-	102	117617826	-	AHA_2131	-	dsDNA-mimic protein
2074	 51.69	-1	2335842..2336108	-	88	117618350	minE	AHA_2132	-	cell division topological specificity factor MinE
2075	 59.90	0	2336111..2336923	-	270	117618772	minD	AHA_2133	-	septum site-determining protein MinD
2076	 61.96	0	2336942..2337664	-	240	117617664	minC	AHA_2134	-	septum site-determining protein MinC
2077	 54.26	-1	2337772..2338053	+	93	117619720	-	AHA_2135	-	hypothetical protein
2078	 59.27	0	2338050..2339009	+	319	117620167	-	AHA_2136	-	membrane-bound lytic murein transglycosylase B
2079	 61.85	0	2339228..2340598	-	456	117620660	sdaA-1	AHA_2137	-	L-serine ammonia-lyase
2080	 64.71	0	2340876..2342258	-	460	117621113	sdaA-2	AHA_2138	-	L-serine ammonia-lyase
62.23	MEAN

5.38	STD DEV




Last Updated: Dec 04, 2008