IslandPath Analysis: Aeromonas hydrophila subsp. hydrophila ATCC 7966



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 62.23   STD DEV: 5.38
Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome - 1..4744448
4122 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1907	 67.64	+1	2147332..2148459	+	375	117621246	-	AHA_1958	-	HPP family protein
1908	 67.39	0	2148502..2150436	-	644	117617768	-	AHA_1959	-	amidohydrolase
1909	 68.94	+1	2150636..2151295	+	219	117618235	-	AHA_1960	-	putative transcription regulator
1910	 67.22	0	2151391..2152644	-	417	117618950	-	AHA_1961	-	D-amino acid dehydrogenase small subunit
1911	 64.04	0	2152796..2154316	-	506	117617580	-	AHA_1962	-	cryptochrome/photolyase
1912	 63.78	0	2154952..2156337	+	461	117620087	tnaA	AHA_1963	-	tryptophanase
1913	 65.40	0	2156421..2157365	-	314	117618743	-	AHA_1964	-	periplasmic binding protein
1914	 68.92	+1	2157522..2158277	+	251	117618202	-	AHA_1965	-	phosphopantetheinyl transferase
1915	 66.17	0	2158339..2159142	-	267	117620581	-	AHA_1966	-	iron chelate ABC transporter ATP-binding protein
1916	 67.71	+1	2159186..2160331	-	381	117619433	-	AHA_1967	-	iron chelate ABC transporter permease
1917	 65.88	0	2160267..2161283	-	338	117618982	-	AHA_1968	-	iron chelate ABC transporter permease
1918	 63.07	0	2161351..2163324	-	657	117621381	-	AHA_1969	-	TonB-dependent siderophore receptor
1919	 63.57	0	2163382..2164800	-	472	117617797	-	AHA_1970	-	multidrug transporter
1920	 66.14	0	2164862..2165614	+	250	117619717	-	AHA_1971	-	hypothetical protein
1921	 65.66	0	2165675..2166169	-	164	117621283	-	AHA_1972	-	inner membrane protein YfeZ
1922	 58.23	0	2166290..2167237	-	315	117618561	corA	AHA_1973	-	magnesium and cobalt transport protein CorA
1923	 62.96	0	2167650..2167757	-	35	117620424	-	AHA_1974	-	electron transfer flavoprotein-ubiquinone oxidoreductase
1924	 65.15	0	2167757..2169400	-	547	117617960	-	AHA_1975	-	electron transfer flavoprotein-ubiquinone oxidoreductase
1925	 65.74	0	2169516..2170274	+	252	117619314	-	AHA_1976	-	electron transfer flavoprotein beta-subunit
1926	 68.82	+1	2170375..2171301	+	308	117620792	-	AHA_1977	-	electron transfer flavoprotein alpha-subunit
1927	 62.90	0	2171525..2172613	+	362	117621387	serC	AHA_1978	-	phosphoserine aminotransferase
1928	 63.16	0	2172701..2174068	+	455	117619998	aroA	AHA_1979	-	3-phosphoshikimate 1-carboxyvinyltransferase
1929	 63.07	0	2174282..2175337	+	351	117620057	-	AHA_1980	-	phospho-2-dehydro-3-deoxyheptonate aldolase
1930	 64.49	0	2175425..2177035	-	536	117619243	-	AHA_1981	-	methyl-accepting chemotaxis protein
1931	 68.04	+1	2177274..2178653	+	459	117617608	-	AHA_1982	-	coproporphyrinogen III oxidase
1932	 67.91	+1	2178725..2180089	-	454	117620910	xseA	AHA_1983	-	exodeoxyribonuclease VII, large subunit
1933	 67.20	0	2180197..2181126	-	309	117621377	-	AHA_1984	-	putative transporter
1934	 62.14	0	2181265..2181684	-	139	117621446	-	AHA_1985	-	biopolymer transport exbD1 protein
1935	 66.93	0	2181684..2182439	-	251	117619942	-	AHA_1986	-	MotA/TolQ/ExbB proton channel family protein
1936	 64.05	0	2182442..2183245	-	267	117617798	tonB-1	AHA_1987	-	outer membrane receptor-mediated transport energizer protein TonB
1937	 63.06	0	2183497..2185383	-	628	117618276	-	AHA_1988	-	potassium transporter
1938	 62.23	0	2185831..2187294	+	487	117618999	guaB	AHA_1989	-	inosine-5'-monophosphate dehydrogenase
1939	 61.26	0	2187378..2188967	+	529	117618614	guaA	AHA_1990	-	bifunctional GMP synthase/glutamine amidotransferase protein
1940	 57.92	0	2189196..2189618	+	140	117619536	-	AHA_1991	-	hypothetical protein
1941	 35.06	-2	2190341..2191150	+	269	117620281	-	AHA_1992	-	hypothetical protein
1942	 64.49	0	2191492..2192319	-	275	117620235	-	AHA_1993	-	ada regulatory protein
1943	 64.36	0	2192371..2193282	-	303	117620667	-	AHA_1994	-	short chain dehydrogenase
1944	 65.36	0	2193264..2194799	+	511	117621383	-	AHA_1995	-	leucine-rich repeat-containing protein kinase
1945	 63.30	0	2195015..2195668	+	217	117617847	tpm	AHA_1996	-	thiopurine S-methyltransferase
1946	 63.32	0	2195977..2198751	-	924	117618446	-	AHA_1997	-	peptidase insulinase family protein
1947	 58.55	0	2198914..2199381	+	155	117619211	sixA	AHA_1998	-	phosphohistidine phosphatase SixA
1948	 56.02	-1	2199506..2199721	+	71	117618722	-	AHA_1999	-	hypothetical protein
1949	 66.01	0	2199922..2200839	+	305	117619004	-	AHA_2000	-	drug/metabolite exporter family transporter
1950	 60.79	0	2200889..2202505	-	538	117620326	-	AHA_2001	-	periplasmic murein peptide-binding protein
1951	 60.87	0	2202890..2203924	+	344	117621134	fbp	AHA_2002	-	fructose-1,6-bisphosphatase
1952	 65.83	0	2204164..2207628	-	1154	117621017	mfd	AHA_2003	-	transcription-repair coupling factor
1953	 59.20	0	2207638..2208213	-	191	117618166	-	AHA_2004	-	hypothetical protein
1954	 65.29	0	2208290..2209525	+	411	117617461	lolC	AHA_2005	-	lipoprotein-releasing system transmembrane protein LolC
1955	 64.24	0	2209518..2210300	+	260	117618723	lolD	AHA_2006	-	lipoprotein releasing system, ATP-binding protein
1956	 65.06	0	2210300..2211541	+	413	117620209	lolE	AHA_2007	-	lipoprotein releasing system, transmembrane protein LolE
1957	 62.44	0	2211626..2212216	-	196	117617923	-	AHA_2008	-	5'-nucleotidase YfbR
1958	 60.00	0	2212290..2212724	-	144	117618523	-	AHA_2009	-	hypothetical protein
1959	 57.13	0	2213153..2214463	+	436	117618825	tig	AHA_2010	-	trigger factor
1960	 59.04	0	2214571..2215173	+	200	117620419	clpP	AHA_2011	-	ATP-dependent Clp protease, proteolytic subunit ClpP
1961	 59.69	0	2215320..2216594	+	424	117620337	clpX	AHA_2012	-	ATP-dependent protease ATP-binding subunit
1962	 59.36	0	2216736..2219090	+	784	117621379	lon	AHA_2013	-	ATP-dependent protease La
1963	 55.68	-1	2219331..2219603	+	90	117620625	-	AHA_2014	-	DNA-binding protein HU-beta
1964	 60.13	0	2219758..2221668	+	636	117618139	ppiD	AHA_2015	-	peptidylprolyl cis-trans isomerase D
1965	 59.70	0	2221894..2223486	-	530	117617511	-	AHA_2016	-	ABC transporter ATP-binding protein
1966	 59.12	0	2224945..2225355	-	136	117618851	-	AHA_2018	-	hypothetical protein
1967	 54.48	-1	2225454..2225855	-	133	117619292	-	AHA_2019	-	hypothetical protein
1968	 55.17	-1	2226502..2227989	-	495	117617913	-	AHA_2020	-	hypothetical protein
1969	 60.94	0	2228171..2228362	-	63	117619931	-	AHA_2021	-	hypothetical protein
1970	 57.54	0	2229144..2229428	-	94	117620489	-	AHA_2022	-	DNA-binding protein
1971	 48.09	-2	2229994..2231145	-	383	117619042	-	AHA_2023	-	hypothetical protein
1972	 62.22	0	2232078..2232257	-	59	117619607	-	AHA_2024	-	hypothetical protein
1973	 55.45	-1	2232485..2233090	-	201	117618127	-	AHA_2025	-	putative DNA-binding protein
1974	 60.77	0	2233478..2233867	+	129	117618658	-	AHA_2026	-	hypothetical protein
1975	 58.94	0	2234529..2235266	+	245	117619684	-	AHA_2027	-	hypothetical protein
1976	 63.35	0	2235244..2235726	+	160	117620243	-	AHA_2028	-	hypothetical protein
1977	 34.62	-2	2236299..2236766	-	155	117621304	-	AHA_2029	-	hypothetical protein
1978	 35.74	-2	2237161..2237826	-	221	117620720	-	AHA_2030	-	hypothetical protein
1979	 48.74	-2	2237965..2238360	-	131	117621515	-	AHA_2031	-	hypothetical protein
1980	 51.40	-2	2238820..2239605	+	261	117621534	-	AHA_2032	-	hypothetical protein
1981	 49.71	-2	2239584..2240438	+	284	117619779	-	AHA_2033	-	hypothetical protein
1982	 57.78	0	2241671..2241805	-	44	117621072	-	AHA_2034	-	hypothetical protein
1983	 34.87	-2	2242283..2243191	+	302	117618233	-	AHA_2035	-	putative RNA-dependent DNA polymerase
1984	 36.98	-2	2243181..2244851	+	556	117620939	-	AHA_2036	-	RecF/RecN/SMC family protein
1985	 36.62	-2	2244835..2245503	+	222	117620347	-	AHA_2037	-	hypothetical protein
1986	 50.75	-2	2245549..2246283	+	244	117619787	-	AHA_2038	-	Rha family phage regulatory protein
1987	 59.64	0	2246290..2246730	+	146	117619158	-	AHA_2039	-	NinB protein
1988	 65.09	0	2246727..2247044	+	105	117618084	-	AHA_2040	-	hypothetical protein
1989	 66.19	0	2247041..2247463	+	140	117617644	-	AHA_2041	-	hypothetical protein
1990	 60.83	0	2247460..2248161	+	233	117617719	-	AHA_2042	-	hypothetical protein
1991	 45.91	-2	2248208..2248891	-	227	117618283	-	AHA_2043	-	hypothetical protein
1992	 59.92	0	2248997..2250271	-	424	117619027	umuC	AHA_2044	-	protein UmuC
1993	 56.97	0	2250275..2250697	-	140	117618444	umuD	AHA_2045	-	umuD protein
1994	 46.67	-2	2250885..2251949	+	354	117621292	-	AHA_2046	-	hypothetical protein
1995	 52.07	-1	2252032..2252442	+	136	117619452	-	AHA_2047	-	DNA-binding protein Hns
1996	 41.98	-2	2252526..2252999	+	157	117617659	-	AHA_2048	-	hypothetical protein
1997	 47.71	-2	2253020..2253631	+	203	117620106	-	AHA_2049	-	hypothetical protein
1998	 61.99	0	2253952..2254443	+	163	117618756	-	AHA_2050	-	phage lysozyme
1999	 62.35	0	2254269..2254940	+	223	117619502	-	AHA_2052	-	hypothetical protein
2000	 62.96	0	2254488..2254838	-	116	117620197	-	AHA_2051	-	hypothetical protein
2001	 56.63	-1	2255023..2255919	+	298	117619882	-	AHA_2053	-	putative small subunit bacteriophage terminase
2002	 37.22	-2	2255959..2256705	+	248	117620963	-	AHA_2054	-	hypothetical protein
2003	 53.43	-1	2256773..2257837	+	354	117620548	-	AHA_2055	-	large subunit terminase
2004	 63.41	0	2260336..2261991	-	551	117620226	actP	AHA_2056	-	acetate permease
2005	 59.29	0	2261988..2262299	-	103	117617698	-	AHA_2057	-	hypothetical protein
2006	 66.99	0	2262409..2263035	-	208	117621105	-	AHA_2058	-	DNA polymerase III subunit epsilon
62.23	MEAN

5.38	STD DEV




Last Updated: Dec 04, 2008