IslandPathversion 1.0

IslandPath Analysis: Aeromonas hydrophila subsp. hydrophila ATCC 7966



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 62.23 STD DEV: 5.38
Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome - 1..4744448
4122 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1866	 64.82	0	2091384..2092736	-	450	117620822	dcuC	AHA_1917	-	C4-dicarboxylate transporter DcuC
1867	 63.86	0	2093102..2093671	+	189	117619930	-	AHA_1918	-	hypothetical protein
1868	 65.02	0	2093754..2095751	-	665	117620480	-	AHA_1919	-	tRNA (5-aminomethyl-2-thiouridylate) methyltransferase
1869	 60.64	0	2095863..2097074	+	403	117619117	fabB	AHA_1920	-	3-oxoacyl-[acyl-carrier-protein] synthase I
1870	 66.26	0	2097134..2097628	-	164	117619923	-	AHA_1921	-	acetyltransferase
1871	 60.14	0	2098162..2099448	-	428	117618018	gltA	AHA_1922	-	type II citrate synthase
1872	 53.85	-1	2099873..2100262	+	129	117618735	sdhC	AHA_1923	-	succinate dehydrogenase cytochrome b556 large membrane subunit
1873	 57.39	0	2100256..2100600	+	114	117618674	-	AHA_1924	-	succinate dehydrogenase hydrophobic membrane anchor protein
1874	 62.93	0	2100602..2102368	+	588	117619269	sdhA	AHA_1925	-	succinate dehydrogenase flavoprotein subunit
1875	 57.18	0	2102385..2103101	+	238	117617620	-	AHA_1926	-	succinate dehydrogenase iron-sulfur protein
1876	 62.32	0	2103158..2106034	+	958	117618342	kgd	AHA_1927	-	alpha-ketoglutarate decarboxylase
1877	 63.72	0	2106127..2107314	+	395	117620504	sucB	AHA_1928	-	2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase
1878	 61.35	0	2107538..2108704	+	388	117620947	-	AHA_1929	-	succinyl-CoA synthetase beta chain
1879	 62.66	0	2108704..2109576	+	290	117618581	-	AHA_1930	-	succinyl-CoA synthetase alpha chain
1880	 36.63	-2	2110509..2111084	+	191	117617819	-	AHA_1931	-	hypothetical protein
1881	 59.65	0	2111264..2111719	+	151	117619051	-	AHA_1932	-	hypothetical protein
1882	 66.10	0	2111863..2113269	-	468	117617999	-	AHA_1933	-	glycine/D-amino acid oxidase
1883	 63.58	0	2113288..2115036	-	582	117618057	-	AHA_1934	-	ABC transporter, permease protein
1884	 64.75	0	2115033..2116127	-	364	117621470	-	AHA_1935	-	ferric cations import ATP-binding protein FbpC 2
1885	 61.47	0	2116400..2117419	-	339	117617747	-	AHA_1936	-	ABC transporter, periplasmic binding protein
1886	 60.32	0	2117540..2118484	-	314	117620763	-	AHA_1937	-	2-aminoethylphosphonate transport, repressor
1887	 66.14	0	2118513..2119655	+	380	117621218	phnW	AHA_1938	-	2-aminoethylphosphonate--pyruvate transaminase
1888	 63.72	0	2119652..2121076	+	474	117619632	-	AHA_1939	-	4-aminobutyrate aminotransferase
1889	 65.83	0	2121069..2121908	+	279	117620036	phnX	AHA_1940	-	phosphonoacetaldehyde hydrolase
1890	 56.59	-1	2122032..2124353	-	773	117619410	pflB	AHA_1941	-	formate acetyltransferase
1891	 57.24	0	2124360..2125208	-	282	117617646	-	AHA_1942	-	putative formate transporter FocA
1892	 63.26	0	2125589..2127349	-	586	117620803	-	AHA_1943	-	hypothetical protein
1893	 64.13	0	2127477..2127791	-	104	117621402	-	AHA_1944	-	SugE protein
1894	 63.80	0	2128131..2129246	+	371	117621122	asd-1	AHA_1945	-	aspartate-semialdehyde dehydrogenase
1895	 65.73	0	2129849..2132626	+	925	117619667	-	AHA_1946	-	M16B family peptidase
1896	 65.64	0	2132723..2133886	-	387	117619346	-	AHA_1947	-	methionine gamma-lyase
1897	 68.91	+1	2133979..2135049	-	356	117617896	-	AHA_1948	-	2OG-Fe(II) oxygenase superfamily protein
1898	 67.14	0	2135510..2136148	-	212	117617749	-	AHA_1949	-	YwnB
1899	 69.65	+1	2136250..2137155	+	301	117618325	-	AHA_1950	-	LysR family transcriptional regulator
1900	 65.86	0	2137281..2138021	-	246	117620672	-	AHA_1951	-	acetoacetyl-CoA reductase
1901	 68.92	+1	2138205..2139182	+	325	117621256	-	AHA_1952	-	transcriptional activator
1902	 63.96	0	2139436..2141580	+	714	117619076	-	AHA_1953	-	ferrichrome-iron receptor
1903	 71.50	+1	2141619..2142425	+	268	117619513	-	AHA_1954	-	hypothetical protein
1904	 67.75	+1	2142470..2143390	-	306	117618191	metR	AHA_1955	-	HTH-type transcriptional regulator MetR
1905	 64.82	0	2143564..2145837	+	757	117617530	metE	AHA_1956	-	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
1906	 67.65	+1	2145925..2147046	-	373	117620695	-	AHA_1957	-	heptosyltransferase family protein
1907	 67.64	+1	2147332..2148459	+	375	117621246	-	AHA_1958	-	HPP family protein
1908	 67.39	0	2148502..2150436	-	644	117617768	-	AHA_1959	-	amidohydrolase
1909	 68.94	+1	2150636..2151295	+	219	117618235	-	AHA_1960	-	putative transcription regulator
1910	 67.22	0	2151391..2152644	-	417	117618950	-	AHA_1961	-	D-amino acid dehydrogenase small subunit
1911	 64.04	0	2152796..2154316	-	506	117617580	-	AHA_1962	-	cryptochrome/photolyase
1912	 63.78	0	2154952..2156337	+	461	117620087	tnaA	AHA_1963	-	tryptophanase
1913	 65.40	0	2156421..2157365	-	314	117618743	-	AHA_1964	-	periplasmic binding protein
1914	 68.92	+1	2157522..2158277	+	251	117618202	-	AHA_1965	-	phosphopantetheinyl transferase
1915	 66.17	0	2158339..2159142	-	267	117620581	-	AHA_1966	-	iron chelate ABC transporter ATP-binding protein
1916	 67.71	+1	2159186..2160331	-	381	117619433	-	AHA_1967	-	iron chelate ABC transporter permease
1917	 65.88	0	2160267..2161283	-	338	117618982	-	AHA_1968	-	iron chelate ABC transporter permease
1918	 63.07	0	2161351..2163324	-	657	117621381	-	AHA_1969	-	TonB-dependent siderophore receptor
1919	 63.57	0	2163382..2164800	-	472	117617797	-	AHA_1970	-	multidrug transporter
1920	 66.14	0	2164862..2165614	+	250	117619717	-	AHA_1971	-	hypothetical protein
1921	 65.66	0	2165675..2166169	-	164	117621283	-	AHA_1972	-	inner membrane protein YfeZ
1922	 58.23	0	2166290..2167237	-	315	117618561	corA	AHA_1973	-	magnesium and cobalt transport protein CorA
1923	 62.96	0	2167650..2167757	-	35	117620424	-	AHA_1974	-	electron transfer flavoprotein-ubiquinone oxidoreductase
1924	 65.15	0	2167757..2169400	-	547	117617960	-	AHA_1975	-	electron transfer flavoprotein-ubiquinone oxidoreductase
1925	 65.74	0	2169516..2170274	+	252	117619314	-	AHA_1976	-	electron transfer flavoprotein beta-subunit
1926	 68.82	+1	2170375..2171301	+	308	117620792	-	AHA_1977	-	electron transfer flavoprotein alpha-subunit
1927	 62.90	0	2171525..2172613	+	362	117621387	serC	AHA_1978	-	phosphoserine aminotransferase
1928	 63.16	0	2172701..2174068	+	455	117619998	aroA	AHA_1979	-	3-phosphoshikimate 1-carboxyvinyltransferase
1929	 63.07	0	2174282..2175337	+	351	117620057	-	AHA_1980	-	phospho-2-dehydro-3-deoxyheptonate aldolase
1930	 64.49	0	2175425..2177035	-	536	117619243	-	AHA_1981	-	methyl-accepting chemotaxis protein
1931	 68.04	+1	2177274..2178653	+	459	117617608	-	AHA_1982	-	coproporphyrinogen III oxidase
1932	 67.91	+1	2178725..2180089	-	454	117620910	xseA	AHA_1983	-	exodeoxyribonuclease VII, large subunit
1933	 67.20	0	2180197..2181126	-	309	117621377	-	AHA_1984	-	putative transporter
1934	 62.14	0	2181265..2181684	-	139	117621446	-	AHA_1985	-	biopolymer transport exbD1 protein
1935	 66.93	0	2181684..2182439	-	251	117619942	-	AHA_1986	-	MotA/TolQ/ExbB proton channel family protein
1936	 64.05	0	2182442..2183245	-	267	117617798	tonB-1	AHA_1987	-	outer membrane receptor-mediated transport energizer protein TonB
1937	 63.06	0	2183497..2185383	-	628	117618276	-	AHA_1988	-	potassium transporter
1938	 62.23	0	2185831..2187294	+	487	117618999	guaB	AHA_1989	-	inosine-5'-monophosphate dehydrogenase
1939	 61.26	0	2187378..2188967	+	529	117618614	guaA	AHA_1990	-	bifunctional GMP synthase/glutamine amidotransferase protein
1940	 57.92	0	2189196..2189618	+	140	117619536	-	AHA_1991	-	hypothetical protein
1941	 35.06	-2	2190341..2191150	+	269	117620281	-	AHA_1992	-	hypothetical protein
1942	 64.49	0	2191492..2192319	-	275	117620235	-	AHA_1993	-	ada regulatory protein
1943	 64.36	0	2192371..2193282	-	303	117620667	-	AHA_1994	-	short chain dehydrogenase
1944	 65.36	0	2193264..2194799	+	511	117621383	-	AHA_1995	-	leucine-rich repeat-containing protein kinase
1945	 63.30	0	2195015..2195668	+	217	117617847	tpm	AHA_1996	-	thiopurine S-methyltransferase
1946	 63.32	0	2195977..2198751	-	924	117618446	-	AHA_1997	-	peptidase insulinase family protein
1947	 58.55	0	2198914..2199381	+	155	117619211	sixA	AHA_1998	-	phosphohistidine phosphatase SixA
1948	 56.02	-1	2199506..2199721	+	71	117618722	-	AHA_1999	-	hypothetical protein
1949	 66.01	0	2199922..2200839	+	305	117619004	-	AHA_2000	-	drug/metabolite exporter family transporter
1950	 60.79	0	2200889..2202505	-	538	117620326	-	AHA_2001	-	periplasmic murein peptide-binding protein
1951	 60.87	0	2202890..2203924	+	344	117621134	fbp	AHA_2002	-	fructose-1,6-bisphosphatase
1952	 65.83	0	2204164..2207628	-	1154	117621017	mfd	AHA_2003	-	transcription-repair coupling factor
1953	 59.20	0	2207638..2208213	-	191	117618166	-	AHA_2004	-	hypothetical protein
1954	 65.29	0	2208290..2209525	+	411	117617461	lolC	AHA_2005	-	lipoprotein-releasing system transmembrane protein LolC
1955	 64.24	0	2209518..2210300	+	260	117618723	lolD	AHA_2006	-	lipoprotein releasing system, ATP-binding protein
1956	 65.06	0	2210300..2211541	+	413	117620209	lolE	AHA_2007	-	lipoprotein releasing system, transmembrane protein LolE
1957	 62.44	0	2211626..2212216	-	196	117617923	-	AHA_2008	-	5'-nucleotidase YfbR
1958	 60.00	0	2212290..2212724	-	144	117618523	-	AHA_2009	-	hypothetical protein
1959	 57.13	0	2213153..2214463	+	436	117618825	tig	AHA_2010	-	trigger factor
1960	 59.04	0	2214571..2215173	+	200	117620419	clpP	AHA_2011	-	ATP-dependent Clp protease, proteolytic subunit ClpP
1961	 59.69	0	2215320..2216594	+	424	117620337	clpX	AHA_2012	-	ATP-dependent protease ATP-binding subunit
1962	 59.36	0	2216736..2219090	+	784	117621379	lon	AHA_2013	-	ATP-dependent protease La
1963	 55.68	-1	2219331..2219603	+	90	117620625	-	AHA_2014	-	DNA-binding protein HU-beta
1964	 60.13	0	2219758..2221668	+	636