IslandPathversion 1.0

IslandPath Analysis: Aeromonas hydrophila subsp. hydrophila ATCC 7966



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 62.23 STD DEV: 5.38
Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome - 1..4744448
4122 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1820	 63.24	0	2046352..2047110	+	252	117620905	-	AHA_1871	-	tRNA-(ms[2]io[6]A)-hydroxylase
1821	 64.50	0	2047265..2048050	-	261	117618135	sapF	AHA_1872	-	peptide ABC transporter, ATP-binding protein SapF
1822	 63.56	0	2048106..2049104	-	332	117617647	sapD	AHA_1873	-	peptide ABC transporter, ATP-binding protein SapD
1823	 64.21	0	2049104..2049997	-	297	117617866	sapC	AHA_1874	-	peptide ABC transporter, permease protein SapC
1824	 65.62	0	2050033..2050992	-	319	117618512	sapB	AHA_1875	-	peptide ABC transporter, permease protein SapB
1825	 64.43	0	2050995..2052560	-	521	117618799	sapA	AHA_1876	-	peptide ABC transporter, periplasmic peptide-binding protein SapA
1826	 64.93	0	2052681..2053715	-	344	117620434	-	AHA_1877	-	PSP operon transcriptional activator
1827	 63.44	0	2053911..2054591	+	226	117621025	-	AHA_1878	-	phage shock protein A
1828	 60.34	0	2054595..2054831	+	78	117621464	pspB	AHA_1879	-	phage shock protein B
1829	 62.11	0	2054860..2055342	+	160	117619644	-	AHA_1880	-	phage shock protein C
1830	 65.20	0	2055450..2056880	+	476	117620218	-	AHA_1881	-	amino acid regulated cytosolic protein
1831	 68.81	+1	2056947..2057972	+	341	117618546	-	AHA_1882	-	hypothetical protein
1832	 65.79	0	2058144..2058938	+	264	117619142	phhA	AHA_1883	-	phenylalanine 4-monooxygenase
1833	 60.77	0	2058993..2059331	+	112	117619419	-	AHA_1884	-	pterin-4-alpha-carbinolamine dehydratase
1834	 56.86	0	2059351..2059452	+	33	117617926	-	AHA_1885	-	pterin-4-alpha-carbinolamine dehydratase
1835	 64.28	0	2059587..2061134	+	515	117618278	tyrR	AHA_1886	-	transcriptional regulatory protein TyrR
1836	 65.96	0	2061312..2061881	+	189	117620664	-	AHA_1887	-	hypothetical protein
1837	 65.17	0	2061878..2063146	+	422	117620962	-	AHA_1888	-	inner membrane protein YfiN
1838	 62.17	0	2063149..2063637	+	162	117621166	-	AHA_1889	-	OmpA family protein
1839	 61.79	0	2063695..2064474	-	259	117619693	-	AHA_1890	-	TerC protein
1840	 67.83	+1	2064548..2065663	+	371	117620232	-	AHA_1891	-	ATP-NAD kinase
1841	 57.35	0	2065774..2066052	+	92	117619382	-	AHA_1892	-	hypothetical protein
1842	 63.36	0	2066150..2067814	+	554	117617870	-	AHA_1893	-	long-chain acyl-CoA synthetase
1843	 66.44	0	2067899..2068780	-	293	117618483	cdd	AHA_1894	-	cytidine deaminase
1844	 65.94	0	2068968..2069654	-	228	117620567	-	AHA_1895	-	LrgB family protein
1845	 62.46	0	2069651..2070007	-	118	117621147	-	AHA_1896	-	LrgA family protein
1846	 67.84	+1	2070167..2071876	+	569	117618141	-	AHA_1897	-	alpha-galactosidase
1847	 59.44	0	2071949..2072488	-	179	117617682	-	AHA_1898	-	hypothetical protein
1848	 61.77	0	2072610..2074304	-	564	117619062	-	AHA_1899	-	exodeoxyribonuclease I
1849	 64.13	0	2074271..2075770	-	499	117618604	araA	AHA_1900	-	L-arabinose isomerase
1850	 64.38	0	2075784..2076482	-	232	117619029	araD	AHA_1901	-	L-ribulose-5-phosphate 4-epimerase
1851	 68.32	+1	2076479..2078170	-	563	117618580	araB	AHA_1902	-	ribulokinase
1852	 61.69	0	2078532..2079515	+	327	117620455	-	AHA_1903	-	L-arabinose ABC transporter, periplasmic L-arabinose-binding protein
1853	 63.07	0	2079588..2081087	+	499	117620006	araG	AHA_1904	-	L-arabinose transporter ATP-binding protein
1854	 64.37	0	2081136..2082137	+	333	117617670	araH	AHA_1905	-	L-arabinose transporter permease protein
1855	 63.05	0	2082282..2083193	+	303	117620896	araC	AHA_1906	-	DNA-binding transcriptional regulator AraC
1856	 70.48	+1	2083288..2084022	-	244	117617626	-	AHA_1907	-	LysR family transcriptional regulator
1857	 65.45	0	2084029..2084193	-	54	117619021	-	AHA_1908	-	LysR family transcriptional regulator
1858	 64.82	0	2084317..2085183	+	288	117618116	-	AHA_1909	-	pirin, N-terminal:Pirin, C-terminal
1859	 60.32	0	2085234..2085359	-	41	117617629	rpmJ	AHA_1910	-	ribosomal protein L36
1860	 56.67	-1	2085356..2085625	-	89	117621340	rpmE-1	AHA_1911	-	ribosomal protein L31
1861	 61.85	0	2085882..2086130	+	82	117620802	-	AHA_1912	-	DNA-damage-inducible protein I
1862	 63.26	0	2086266..2087087	-	273	117619086	-	AHA_1913	-	hypothetical protein
1863	 59.72	0	2087112..2087615	-	167	117618493	-	AHA_1914	-	hypothetical protein
1864	 64.10	0	2087756..2089468	-	570	117618185	-	AHA_1915	-	hypothetical protein
1865	 68.47	+1	2089595..2091253	-	552	117617640	-	AHA_1916	-	5'-nucleotidase
1866	 64.82	0	2091384..2092736	-	450	117620822	dcuC	AHA_1917	-	C4-dicarboxylate transporter DcuC
1867	 63.86	0	2093102..2093671	+	189	117619930	-	AHA_1918	-	hypothetical protein
1868	 65.02	0	2093754..2095751	-	665	117620480	-	AHA_1919	-	tRNA (5-aminomethyl-2-thiouridylate) methyltransferase
1869	 60.64	0	2095863..2097074	+	403	117619117	fabB	AHA_1920	-	3-oxoacyl-[acyl-carrier-protein] synthase I
1870	 66.26	0	2097134..2097628	-	164	117619923	-	AHA_1921	-	acetyltransferase
1871	 60.14	0	2098162..2099448	-	428	117618018	gltA	AHA_1922	-	type II citrate synthase
1872	 53.85	-1	2099873..2100262	+	129	117618735	sdhC	AHA_1923	-	succinate dehydrogenase cytochrome b556 large membrane subunit
1873	 57.39	0	2100256..2100600	+	114	117618674	-	AHA_1924	-	succinate dehydrogenase hydrophobic membrane anchor protein
1874	 62.93	0	2100602..2102368	+	588	117619269	sdhA	AHA_1925	-	succinate dehydrogenase flavoprotein subunit
1875	 57.18	0	2102385..2103101	+	238	117617620	-	AHA_1926	-	succinate dehydrogenase iron-sulfur protein
1876	 62.32	0	2103158..2106034	+	958	117618342	kgd	AHA_1927	-	alpha-ketoglutarate decarboxylase
1877	 63.72	0	2106127..2107314	+	395	117620504	sucB	AHA_1928	-	2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase
1878	 61.35	0	2107538..2108704	+	388	117620947	-	AHA_1929	-	succinyl-CoA synthetase beta chain
1879	 62.66	0	2108704..2109576	+	290	117618581	-	AHA_1930	-	succinyl-CoA synthetase alpha chain
1880	 36.63	-2	2110509..2111084	+	191	117617819	-	AHA_1931	-	hypothetical protein
1881	 59.65	0	2111264..2111719	+	151	117619051	-	AHA_1932	-	hypothetical protein
1882	 66.10	0	2111863..2113269	-	468	117617999	-	AHA_1933	-	glycine/D-amino acid oxidase
1883	 63.58	0	2113288..2115036	-	582	117618057	-	AHA_1934	-	ABC transporter, permease protein
1884	 64.75	0	2115033..2116127	-	364	117621470	-	AHA_1935	-	ferric cations import ATP-binding protein FbpC 2
1885	 61.47	0	2116400..2117419	-	339	117617747	-	AHA_1936	-	ABC transporter, periplasmic binding protein
1886	 60.32	0	2117540..2118484	-	314	117620763	-	AHA_1937	-	2-aminoethylphosphonate transport, repressor
1887	 66.14	0	2118513..2119655	+	380	117621218	phnW	AHA_1938	-	2-aminoethylphosphonate--pyruvate transaminase
1888	 63.72	0	2119652..2121076	+	474	117619632	-	AHA_1939	-	4-aminobutyrate aminotransferase
1889	 65.83	0	2121069..2121908	+	279	117620036	phnX	AHA_1940	-	phosphonoacetaldehyde hydrolase
1890	 56.59	-1	2122032..2124353	-	773	117619410	pflB	AHA_1941	-	formate acetyltransferase
1891	 57.24	0	2124360..2125208	-	282	117617646	-	AHA_1942	-	putative formate transporter FocA
1892	 63.26	0	2125589..2127349	-	586	117620803	-	AHA_1943	-	hypothetical protein
1893	 64.13	0	2127477..2127791	-	104	117621402	-	AHA_1944	-	SugE protein
1894	 63.80	0	2128131..2129246	+	371	117621122	asd-1	AHA_1945	-	aspartate-semialdehyde dehydrogenase
1895	 65.73	0	2129849..2132626	+	925	117619667	-	AHA_1946	-	M16B family peptidase
1896	 65.64	0	2132723..2133886	-	387	117619346	-	AHA_1947	-	methionine gamma-lyase
1897	 68.91	+1	2133979..2135049	-	356	117617896	-	AHA_1948	-	2OG-Fe(II) oxygenase superfamily protein
1898	 67.14	0	2135510..2136148	-	212	117617749	-	AHA_1949	-	YwnB
1899	 69.65	+1	2136250..2137155	+	301	117618325	-	AHA_1950	-	LysR family transcriptional regulator
1900	 65.86	0	2137281..2138021	-	246	117620672	-	AHA_1951	-	acetoacetyl-CoA reductase
1901	 68.92	+1	2138205..2139182	+	325	117621256	-	AHA_1952	-	transcriptional activator
1902	 63.96	0	2139436..2141580	+	714	117619076	-	AHA_1953	-	ferrichrome-iron receptor
1903	 71.50	+1	2141619..2142425	+	268	117619513	-	AHA_1954	-	hypothetical protein
1904	 67.75	+1	2142470..2143390	-	306	117618191	metR	AHA_1955	-	HTH-type transcriptional regulator MetR
1905	 64.82	0	2143564..2145837	+	757	117617530	metE	AHA_1956	-	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
1906	 67.65	+1	2145925..2147046	-	373	117620695	-	AHA_1957	-	heptosyltransferase family protein
1907	 67.64	+1	2147332..2148459	+	375	117621246	-	AHA_1958	-	HPP family protein
1908	 67.39	0	2148502..2150436	-	644	117617768	-	AHA_1959	-	amidohydrolase
1909	 68.94	+1	2150636..2151295	+	219	117618235	-	AHA_1960	-	putative transcription regulator
1910	 67.22	0	2151391..2152644	-	417	117618950	-	AHA_1961	-	D-amino acid dehydrogenase small subunit
1911	 64.04	0	2152796..2154316	-	506	117617580	-	AHA_1962	-	cryptochrome/photolyase
1912	 63.78	0	2154952..2156337	+	461	117620087	tnaA	AHA_1963	-	tryptophanase
1913	 65.40	0	2156421..2157365	-	314	117618743	-	AHA_1964	-	periplasmic binding protein
1914	 68.92	+1	2157522..2158277	+	251	117618202	-	AHA_1965	-	phosphopantetheinyl transferase
1915	 66.17	0	2158339..2159142	-	267	117620581	-	AHA_1966	-	iron chelate ABC transporter ATP-binding protein
1916	 67.71	+1	2159186..2160331	-	381	117619433	-	AHA_1967	-	iron chelate ABC transporter permease
1917	 65.88	0	2160267..2161283	-	338	117618982	-	AHA_1968	-	iron chelate ABC transporter permease
1918	 63.07	0	2161351..2163324	-	657	117621381	-	AHA_1969	-	TonB-dependent siderophore receptor
1919	 63.57	0	2163382..2164800	-	472