IslandPath Analysis: Aeromonas hydrophila subsp. hydrophila ATCC 7966



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 62.23   STD DEV: 5.38
Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome - 1..4744448
4122 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1624	 62.36	0	1824448..1825584	+	378	117618794	-	AHA_1670	-	maltose/maltodextrin import ATP-binding protein MalK
1625	 64.95	0	1825700..1826515	-	271	117619740	-	AHA_1671	-	polyphosphate kinase 2
1626	 66.67	0	1826628..1827428	+	266	117617916	-	AHA_1672	-	alpha/beta fold family hydrolase
1627	 60.97	0	1827514..1828320	-	268	117618380	mipA	AHA_1673	-	MltA-interacting protein MipA
1628	 63.31	0	1828356..1829426	-	356	117620612	-	AHA_1674	-	PerM family permease
1629	 65.02	0	1829442..1829684	-	80	117621045	-	AHA_1675	-	hypothetical protein
1630	 64.89	0	1829864..1831267	+	467	117619572	-	AHA_1676	-	zinc metalloprotease
1631	 65.42	0	1831387..1831869	-	160	117620194	-	AHA_1677	-	thioredoxin
1632	 62.11	0	1831930..1832280	+	116	117619418	arsC-1	AHA_1678	-	arsenate reductase
1633	 65.15	0	1832277..1832672	+	131	117618698	-	AHA_1679	-	hypothetical protein
1634	 62.93	0	1832963..1834033	+	356	117618246	-	AHA_1680	-	penicillin acylase
1635	 65.86	0	1834070..1834690	-	206	117617502	-	AHA_1681	-	hypothetical protein
1636	 69.67	+1	1834867..1835997	+	376	117621180	iadA	AHA_1682	-	isoaspartyl dipeptidase
1637	 63.46	0	1836108..1837010	-	300	117621525	-	AHA_1683	-	hypothetical protein
1638	 60.31	0	1837544..1838314	+	256	117618079	-	AHA_1684	-	histidine ABC transporter, ATP-binding protein
1639	 59.30	0	1838380..1839153	+	257	117617755	-	AHA_1685	-	arginine and ornithine binding protein
1640	 60.86	0	1839358..1840098	+	246	117619256	-	AHA_1686	-	histidine ABC transporter, permease protein HisQ
1641	 61.33	0	1840102..1840794	+	230	117620358	-	AHA_1687	-	histidine ABC transporter, permease protein HisM
1642	 65.11	0	1840846..1841487	-	213	117619888	-	AHA_1688	-	hypothetical protein
1643	 60.07	0	1841574..1842392	-	272	117619525	pflA	AHA_1689	-	pyruvate formate lyase-activating enzyme 1
1644	 64.52	0	1842458..1845436	-	992	117620983	-	AHA_1690	-	PAS/GGDEF domain-containing protein
1645	 63.88	0	1845532..1847220	+	562	117618080	-	AHA_1691	-	NADH dehydrogenase
1646	 65.48	0	1847308..1852275	+	1655	117617541	-	AHA_1692	-	alpha-2-macroglobulin, N-terminal:Alpha-2-macroglobulin, N-terminal
1647	 67.08	0	1852286..1854685	+	799	117619285	pbpC	AHA_1693	-	penicillin-binding protein 1C
1648	 64.55	0	1854787..1855590	-	267	117619300	-	AHA_1694	-	hypothetical protein
1649	 59.56	0	1855925..1857373	+	482	117620212	thiI	AHA_1695	-	thiamine biosynthesis protein ThiI
1650	 57.73	0	1857452..1857988	-	178	117618642	-	AHA_1696	-	hypothetical protein
1651	 59.72	0	1857946..1858578	-	210	117621126	-	AHA_1697	-	hypothetical protein
1652	 50.72	-2	1858995..1859903	+	302	117619531	-	AHA_1698	-	flagellin
1653	 50.88	-2	1860482..1861387	+	301	117618426	-	AHA_1699	-	flagellin
1654	 50.34	-2	1861426..1861866	+	146	117620915	-	AHA_1700	-	flagellin protein
1655	 52.27	-1	1861893..1863302	+	469	117620517	fliD	AHA_1701	-	flagellar hook-associated protein 2
1656	 54.37	-1	1863328..1863750	+	140	117618838	fliS	AHA_1702	-	flagellar protein FliS
1657	 49.10	-2	1864132..1866141	+	669	117619628	-	AHA_1703	-	hypothetical protein
1658	 62.29	0	1866230..1867051	-	273	117619898	-	AHA_1704	-	periplasmic binding protein
1659	 67.36	0	1867044..1867913	-	289	117621445	-	AHA_1705	-	cobalamin biosynthesis protein CobD
1660	 61.33	0	1867991..1868683	-	230	117620840	mtnN-2	AHA_1706	-	MTA/SAH nucleosidase
1661	 62.71	0	1868791..1869549	-	252	117617669	-	AHA_1707	-	hypothetical protein
1662	 68.38	+1	1869639..1870571	-	310	117621183	-	AHA_1708	-	GufA protein
1663	 62.61	0	1870808..1872580	+	590	117618584	-	AHA_1709	-	methyl-accepting chemotaxis protein
1664	 56.37	-1	1873040..1873894	-	284	117618381	-	AHA_1710	-	inositol-1-monophosphatase
1665	 60.75	0	1874045..1874500	+	151	117620623	-	AHA_1711	-	hypothetical protein
1666	 61.09	0	1874693..1875355	+	220	117620162	-	AHA_1712	-	glutathione S-transferase
1667	 64.17	0	1875606..1876805	+	399	117617652	emrD	AHA_1713	-	multidrug resistance protein D
1668	 54.93	-1	1877170..1877544	-	124	117620065	-	AHA_1714	-	hypothetical protein
1669	 61.40	0	1877676..1878245	+	189	117620775	-	AHA_1715	-	YecA family protein
1670	 68.64	+1	1878429..1879646	+	405	117621208	ubiH	AHA_1716	-	2-polyprenyl-6-methoxyphenol 4-hydroxylase
1671	 69.35	+1	1879742..1880971	+	409	117618973	-	AHA_1717	-	2-octaprenyl-6-methoxyphenol hydroxylase
1672	 63.39	0	1881450..1882547	+	365	117619425	gcvT	AHA_1718	-	glycine cleavage system aminomethyltransferase T
1673	 63.08	0	1882653..1883042	+	129	117619614	gcvH	AHA_1719	-	glycine cleavage system H protein
1674	 64.41	0	1883295..1886171	+	958	117620071	gcvP	AHA_1720	-	glycine dehydrogenase
1675	 55.31	-1	1886286..1887359	-	357	117620214	-	AHA_1721	-	hypothetical protein
1676	 54.21	-1	1887466..1887762	+	98	117620666	-	AHA_1722	-	ArsR family transcriptional regulator
1677	 55.21	-1	1887834..1888217	+	127	117617788	-	AHA_1723	-	arsenic operon regulator
1678	 56.88	0	1888221..1888649	+	142	117619821	-	AHA_1724	-	arsenical resistance operon trans-acting repressor ArsD
1679	 61.44	0	1888718..1890517	+	599	117618702	-	AHA_1725	-	arsenical pump-driving ATPase
1680	 59.03	0	1890616..1891650	+	344	117618201	arsB	AHA_1726	-	arsenical-resistance protein
1681	 61.34	0	1891647..1892078	+	143	117621520	arsC-2	AHA_1727	-	arsenate reductase
1682	 64.13	0	1892219..1892968	+	249	117620933	-	AHA_1728	-	methyltransferase
1683	 60.84	0	1893079..1893387	-	102	117620384	-	AHA_1729	-	hypothetical protein
1684	 66.43	0	1893491..1894783	+	430	117619810	-	AHA_1730	-	major facilitator family transporter
1685	 63.63	0	1894849..1896429	-	526	117619232	-	AHA_1731	-	alkyl hydroperoxide reductase subunit F
1686	 59.26	0	1896523..1897089	-	188	117618506	-	AHA_1732	-	alkyl hydroperoxide reductase subunit C
1687	 60.18	0	1897750..1898196	-	148	117618836	-	AHA_1733	-	CBS domain-containing protein
1688	 62.73	0	1898409..1899476	+	355	117621432	queA	AHA_1734	-	S-adenosylmethionine:tRNA ribosyltransferase-isomerase
1689	 60.25	0	1899547..1900683	+	378	117619612	tgt	AHA_1735	-	queuine tRNA-ribosyltransferase
1690	 55.95	-1	1900734..1901069	+	111	117620253	yajC	AHA_1736	-	preprotein translocase, YajC subunit
1691	 60.79	0	1901088..1902941	+	617	117619109	secD-1	AHA_1737	-	protein-export membrane protein SecD
1692	 60.55	0	1902951..1903898	+	315	117619487	secF-1	AHA_1738	-	protein-export membrane protein SecF
1693	 61.52	0	1903998..1904366	+	122	117617718	-	AHA_1739	-	rhodanese domain-containing protein
1694	 59.51	0	1904511..1905404	+	297	117618287	-	AHA_1740	-	lipoprotein NlpI
1695	 65.64	0	1905522..1906394	-	290	117618241	-	AHA_1741	-	collagenase
1696	 65.16	0	1906407..1907402	-	331	117618957	-	AHA_1742	-	STM-proteaseA
1697	 58.33	0	1907593..1908132	+	179	117620573	-	AHA_1744	-	sterol binding protein
1698	 65.23	0	1908079..1908495	-	138	117621454	-	AHA_1743	-	hypothetical protein
1699	 60.47	0	1908675..1909400	+	241	117618072	-	AHA_1745	-	RNA methyltransferase
1700	 62.10	0	1909494..1909997	+	167	117621543	iscR	AHA_1746	-	iron-sulfur cluster assembly transcription factor IscR
1701	 59.51	0	1910055..1911269	+	404	117619481	iscS	AHA_1747	-	cysteine desulfurase IscS
1702	 56.77	-1	1911311..1911694	+	127	117618910	iscU	AHA_1748	-	scaffold protein
1703	 58.33	0	1911710..1912033	+	107	117620083	iscA	AHA_1749	-	iron-sulfur cluster assembly protein IscA
1704	 58.77	0	1912156..1912674	+	172	117619557	hscB	AHA_1750	-	Fe-S protein assembly co-chaperone HscB
1705	 64.99	0	1912703..1914550	+	615	117619325	hscA	AHA_1751	-	Fe-S protein assembly chaperone HscA
1706	 63.13	0	1914552..1914890	+	112	117618989	fdx	AHA_1752	-	ferredoxin, 2Fe-2S type, ISC system
1707	 66.90	0	1915048..1916349	+	433	117620094	pepB	AHA_1753	-	aminopeptidase B
1708	 67.91	+1	1916453..1917736	+	427	117618593	-	AHA_1754	-	aminopeptidase B
1709	 62.70	0	1918006..1918434	+	142	117620412	-	AHA_1755	-	nucleoside diphosphate kinase
1710	 59.51	0	1918603..1919706	+	367	117619957	-	AHA_1756	-	hypothetical protein
1711	 54.17	-1	1919719..1920510	+	263	117619808	pilF	AHA_1757	-	type IV pilus biogenesis/stability protein PilW
1712	 62.62	0	1920500..1921438	+	312	117621400	-	AHA_1758	-	hypothetical protein
1713	 62.37	0	1921449..1922564	+	371	117620831	ispG	AHA_1759	-	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
1714	 62.28	0	1922703..1923980	+	425	117618684	hisS	AHA_1760	-	histidyl-tRNA synthetase
1715	 63.59	0	1923984..1924634	+	216	117618106	-	AHA_1761	-	TPR repeat-containing protein
1716	 64.42	0	1924654..1925811	+	385	117619948	-	AHA_1762	-	PQQ repeat-containing protein
1717	 61.07	0	1925886..1927385	+	499	117620764	engA	AHA_1763	-	GTP-binding protein EngA
1718	 65.38	0	1927490..1927723	+	77	117620012	-	AHA_1764	-	ubiquitin ligase sinat5
1719	 61.77	0	1928082..1929572	-	496	117620433	-	AHA_1765	-	solute-binding family 3 protein
1720	 65.41	0	1929554..1933627	+	1357	117619003	purL	AHA_1766	-	phosphoribosylformylglycinamidine synthase
1721	 67.13	0	1933689..1935215	-	508	117620409	-	AHA_1767	-	sensory box protein
1722	 64.50	0	1935231..1936664	-	477	117619129	-	AHA_1768	-	response regulator/sensory box/hdig domain-containing protein
1723	 66.40	0	1936661..1937791	-	376	117618555	-	AHA_1769	-	hypothetical protein
62.23	MEAN

5.38	STD DEV




Last Updated: Dec 04