IslandPath Analysis: Aeromonas hydrophila subsp. hydrophila ATCC 7966



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 62.23   STD DEV: 5.38
Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome - 1..4744448
4122 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1566	 65.93	0	1759317..1760540	-	407	117621415	pepT	AHA_1612	-	peptidase T
1567	 61.36	0	1761608..1763509	+	633	117620250	speA	AHA_1613	-	arginine decarboxylase
1568	 59.26	0	1763792..1763980	+	62	117618805	-	AHA_1614	-	hypothetical protein
1569	 57.86	0	1764129..1764446	-	105	117618827	-	AHA_1615	-	hypothetical protein
1570	 67.50	0	1764617..1766773	-	718	117617731	-	AHA_1616	-	methyl-accepting chemotaxis protein
1571	 60.26	0	1766813..1768171	-	452	117619361	-	AHA_1617	-	inner membrane transport protein YhaO
1572	 57.81	0	1768357..1768740	+	127	117620101	-	AHA_1618	-	endoribonuclease L-PSP, putative
1573	 65.43	0	1768763..1770052	+	429	117619552	-	AHA_1619	-	hypothetical protein
1574	 61.77	0	1770111..1770764	+	217	117621287	-	AHA_1620	-	MukF protein
1575	 67.01	0	1770909..1771496	+	195	117620732	-	AHA_1621	-	fructose-2;6-bisphosphatase
1576	 56.55	-1	1771555..1772295	-	246	117620795	-	AHA_1622	-	5-methylcytosine-specific restriction protein A
1577	 57.48	0	1772489..1772956	+	155	117618392	-	AHA_1623	-	hypothetical protein
1578	 61.79	0	1773110..1773478	+	122	117617914	-	AHA_1624	-	lactoylglutathione lyase family protein
1579	 66.54	0	1773602..1775185	-	527	117618216	-	AHA_1625	-	hypothetical protein
1580	 65.33	0	1775383..1776729	-	448	117620585	-	AHA_1626	-	glutamate dehydrogenase
1581	 61.29	0	1777267..1777359	+	30	117618659	-	AHA_1627	-	hypothetical protein
1582	 63.48	0	1777349..1778383	+	344	117619273	-	AHA_1628	-	23S rRNA pseudouridine synthase F
1583	 70.79	+1	1778456..1779691	-	411	117619958	-	AHA_1629	-	cyanate transport protein CynX
1584	 68.65	+1	1779684..1780187	-	167	117620375	-	AHA_1630	-	cytidine/deoxycytidylate deaminase, zinc-binding region
1585	 71.38	+1	1780298..1781146	+	282	117618445	-	AHA_1631	-	LysR family transcriptional regulator
1586	 68.83	+1	1781169..1782368	-	399	117620875	-	AHA_1632	-	MFS family transporter
1587	 67.74	+1	1782480..1782947	-	155	117617522	-	AHA_1633	-	transcriptional regulatory protein
1588	 61.54	0	1782988..1783143	-	51	117617988	-	AHA_1634	-	hypothetical protein
1589	 64.76	0	1783225..1783695	-	156	117619412	-	AHA_1635	-	cytosolic long-chain acyl-CoA thioester hydrolase family protein
1590	 67.31	0	1783716..1784027	-	103	117618569	-	AHA_1636	-	hypothetical protein
1591	 66.82	0	1784170..1784829	+	219	117618328	-	AHA_1637	-	inner membrane protein YebE
1592	 59.92	0	1784965..1785483	+	172	117617742	-	AHA_1638	-	putative acetyltransferase
1593	 68.26	+1	1785524..1786963	-	479	117620868	-	AHA_1639	-	GntR family transcriptional regulator
1594	 63.68	0	1787084..1788655	+	523	117621314	-	AHA_1640	-	cytochrome D ubiquinol oxidase subunit I
1595	 66.40	0	1788655..1789782	+	375	117619551	cydB-1	AHA_1641	-	cytochrome D ubiquinol oxidase, subunit II
1596	 59.65	0	1789810..1789923	+	37	117620503	-	AHA_1642	-	cyd operon protein YbgT
1597	 66.75	0	1789986..1791158	-	390	117618635	-	AHA_1643	-	major facilitator transporter
1598	 63.81	0	1791533..1792336	-	267	117619124	dkgB	AHA_1644	-	2,5-diketo-D-gluconate reductase B
1599	 62.29	0	1792384..1792680	-	98	117619001	-	AHA_1645	-	antibiotic biosynthesis monooxygenase family protein
1600	 59.78	0	1792858..1793220	-	120	117619040	-	AHA_1646	-	glyoxalase/dioxygenase superfamily protein
1601	 66.22	0	1793800..1794702	+	300	117619472	-	AHA_1647	-	putative HTH-type transcriptional regulator YafC
1602	 61.54	0	1794869..1796371	-	500	117621177	glpK	AHA_1648	-	glycerol kinase
1603	 61.48	0	1796426..1797274	-	282	117620737	glpF	AHA_1649	-	glycerol uptake facilitator protein
1604	 60.69	0	1797762..1799117	+	451	117620553	glpT	AHA_1650	-	sn-glycerol-3-phosphate transporter
1605	 61.53	0	1799219..1799977	+	252	117620109	glpR	AHA_1651	-	glycerol-3-phosphate regulon repressor
1606	 65.05	0	1800299..1801786	+	495	117617661	glpD	AHA_1652	-	glycerol-3-phosphate dehydrogenase
1607	 59.63	0	1801889..1802968	+	359	117621321	glpQ	AHA_1653	-	glycerophosphodiester phosphodiesterase
1608	 62.48	0	1803287..1804360	+	357	117618228	-	AHA_1654	-	phospho-2-dehydro-3-deoxyheptonate aldolase
1609	 65.70	0	1804479..1805618	+	379	117621007	tyrA	AHA_1655	-	bifunctional chorismate mutase/prephenate dehydrogenase
1610	 64.61	0	1805691..1806566	-	291	117618458	-	AHA_1656	-	LysR family transcriptional regulator
1611	 54.65	-1	1806566..1807081	-	171	117617813	-	AHA_1657	-	hypothetical protein
1612	 56.51	-1	1807231..1807821	-	196	117621507	-	AHA_1658	-	ecotin
1613	 66.85	0	1807945..1808502	-	185	117621013	-	AHA_1659	-	hypothetical protein
1614	 67.47	0	1808499..1809872	-	457	117618030	-	AHA_1660	-	hypothetical protein
1615	 68.03	+1	1809932..1812346	-	804	117617529	-	AHA_1661	-	proprotein convertase P-domain-containing protein
1616	 70.56	+1	1812379..1814457	-	692	117619592	-	AHA_1662	-	protease II
1617	 65.70	0	1814457..1816619	-	720	117619270	-	AHA_1663	-	hemin receptor
1618	 60.29	0	1816926..1818776	-	616	117620319	-	AHA_1664	-	putative sulfatase
1619	 56.58	-1	1818820..1819047	-	75	117620193	-	AHA_1665	-	hypothetical protein
1620	 59.33	0	1819040..1820170	+	376	117618306	-	AHA_1666	-	nucleoid-associated protein NdpA
1621	 58.38	0	1820566..1821747	+	393	117618791	malE	AHA_1667	-	maltose ABC transporter periplasmic protein
1622	 57.71	0	1821823..1823475	+	550	117621047	malF	AHA_1668	-	maltose transporter membrane protein
1623	 61.28	0	1823488..1824378	+	296	117617897	malG	AHA_1669	-	maltose transporter permease
1624	 62.36	0	1824448..1825584	+	378	117618794	-	AHA_1670	-	maltose/maltodextrin import ATP-binding protein MalK
1625	 64.95	0	1825700..1826515	-	271	117619740	-	AHA_1671	-	polyphosphate kinase 2
1626	 66.67	0	1826628..1827428	+	266	117617916	-	AHA_1672	-	alpha/beta fold family hydrolase
1627	 60.97	0	1827514..1828320	-	268	117618380	mipA	AHA_1673	-	MltA-interacting protein MipA
1628	 63.31	0	1828356..1829426	-	356	117620612	-	AHA_1674	-	PerM family permease
1629	 65.02	0	1829442..1829684	-	80	117621045	-	AHA_1675	-	hypothetical protein
1630	 64.89	0	1829864..1831267	+	467	117619572	-	AHA_1676	-	zinc metalloprotease
1631	 65.42	0	1831387..1831869	-	160	117620194	-	AHA_1677	-	thioredoxin
1632	 62.11	0	1831930..1832280	+	116	117619418	arsC-1	AHA_1678	-	arsenate reductase
1633	 65.15	0	1832277..1832672	+	131	117618698	-	AHA_1679	-	hypothetical protein
1634	 62.93	0	1832963..1834033	+	356	117618246	-	AHA_1680	-	penicillin acylase
1635	 65.86	0	1834070..1834690	-	206	117617502	-	AHA_1681	-	hypothetical protein
1636	 69.67	+1	1834867..1835997	+	376	117621180	iadA	AHA_1682	-	isoaspartyl dipeptidase
1637	 63.46	0	1836108..1837010	-	300	117621525	-	AHA_1683	-	hypothetical protein
1638	 60.31	0	1837544..1838314	+	256	117618079	-	AHA_1684	-	histidine ABC transporter, ATP-binding protein
1639	 59.30	0	1838380..1839153	+	257	117617755	-	AHA_1685	-	arginine and ornithine binding protein
1640	 60.86	0	1839358..1840098	+	246	117619256	-	AHA_1686	-	histidine ABC transporter, permease protein HisQ
1641	 61.33	0	1840102..1840794	+	230	117620358	-	AHA_1687	-	histidine ABC transporter, permease protein HisM
1642	 65.11	0	1840846..1841487	-	213	117619888	-	AHA_1688	-	hypothetical protein
1643	 60.07	0	1841574..1842392	-	272	117619525	pflA	AHA_1689	-	pyruvate formate lyase-activating enzyme 1
1644	 64.52	0	1842458..1845436	-	992	117620983	-	AHA_1690	-	PAS/GGDEF domain-containing protein
1645	 63.88	0	1845532..1847220	+	562	117618080	-	AHA_1691	-	NADH dehydrogenase
1646	 65.48	0	1847308..1852275	+	1655	117617541	-	AHA_1692	-	alpha-2-macroglobulin, N-terminal:Alpha-2-macroglobulin, N-terminal
1647	 67.08	0	1852286..1854685	+	799	117619285	pbpC	AHA_1693	-	penicillin-binding protein 1C
1648	 64.55	0	1854787..1855590	-	267	117619300	-	AHA_1694	-	hypothetical protein
1649	 59.56	0	1855925..1857373	+	482	117620212	thiI	AHA_1695	-	thiamine biosynthesis protein ThiI
1650	 57.73	0	1857452..1857988	-	178	117618642	-	AHA_1696	-	hypothetical protein
1651	 59.72	0	1857946..1858578	-	210	117621126	-	AHA_1697	-	hypothetical protein
1652	 50.72	-2	1858995..1859903	+	302	117619531	-	AHA_1698	-	flagellin
1653	 50.88	-2	1860482..1861387	+	301	117618426	-	AHA_1699	-	flagellin
1654	 50.34	-2	1861426..1861866	+	146	117620915	-	AHA_1700	-	flagellin protein
1655	 52.27	-1	1861893..1863302	+	469	117620517	fliD	AHA_1701	-	flagellar hook-associated protein 2
1656	 54.37	-1	1863328..1863750	+	140	117618838	fliS	AHA_1702	-	flagellar protein FliS
1657	 49.10	-2	1864132..1866141	+	669	117619628	-	AHA_1703	-	hypothetical protein
1658	 62.29	0	1866230..1867051	-	273	117619898	-	AHA_1704	-	periplasmic binding protein
1659	 67.36	0	1867044..1867913	-	289	117621445	-	AHA_1705	-	cobalamin biosynthesis protein CobD
1660	 61.33	0	1867991..1868683	-	230	117620840	mtnN-2	AHA_1706	-	MTA/SAH nucleosidase
1661	 62.71	0	1868791..1869549	-	252	117617669	-	AHA_1707	-	hypothetical protein
1662	 68.38	+1	1869639..1870571	-	310	117621183	-	AHA_1708	-	GufA protein
1663	 62.61	0	1870808..1872580	+	590	117618584	-	AHA_1709	-	methyl-accepting chemotaxis protein
1664	 56.37	-1	1873040..1873894	-	284	117618381	-	AHA_1710	-	inositol-1-monophosphatase
1665	 60.75	0	1874045..1874500	+	151	117620623	-	AHA_1711	-	hypothetical protein
62.23	MEAN

5.38	STD DEV




Last Updated: Dec 04, 2008
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