IslandPath Analysis: Aeromonas hydrophila subsp. hydrophila ATCC 7966



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 62.23   STD DEV: 5.38
Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome - 1..4744448
4122 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1266	 57.47	0	1419908..1420516	-	202	117618090	-	AHA_1307	-	hypothetical protein
1267	 64.78	0	1420548..1422029	+	493	117620340	cls	AHA_1308	-	cardiolipin synthetase
1268	 63.02	0	1422125..1423387	+	420	117617458	-	AHA_1309	-	putative lipoprotein
1269	 61.29	0	1423457..1424293	-	278	117619271	purU	AHA_1310	-	formyltetrahydrofolate deformylase
1270	 62.84	0	1424752..1425405	+	217	117617481	ribB	AHA_1311	-	3,4-dihydroxy-2-butanone 4-phosphate synthase
1271	 64.08	0	1426013..1426861	-	282	117619071	-	AHA_1312	-	thioredoxin domain-containing protein
1272	 63.07	0	1426858..1427580	-	240	117620633	-	AHA_1313	-	4'-phosphopantetheinyltransferase family protein
1273	 58.08	0	1427844..1428344	+	166	117620972	-	AHA_1314	-	NlpC
1274	 62.70	0	1428493..1429449	+	318	117620512	-	AHA_1315	-	putative SAM-dependent methyltransferase
1275	 61.94	0	1429721..1430440	+	239	117619829	-	AHA_1316	-	nodulation protein N
1276	 58.36	0	1430588..1431586	-	332	117619162	-	AHA_1317	-	hypothetical protein
1277	 62.53	0	1431614..1432531	-	305	117619077	-	AHA_1318	-	LysM domain-containing protein
1278	 65.64	0	1433179..1436307	-	1042	117620595	-	AHA_1320	-	putative transporter AmrB
1279	 64.90	0	1436323..1437678	-	451	117618365	-	AHA_1321	-	acriflavin resistance protein A
1280	 62.96	0	1437636..1438364	+	242	117618843	-	AHA_1322	-	two-component response regulator
1281	 63.74	0	1438361..1439419	+	352	117620141	-	AHA_1323	-	sensor histidine kinase
1282	 56.36	-1	1439669..1439998	-	109	117619954	-	AHA_1324	-	quaternary ammonium compound-resistance protein QacE
1283	 58.94	0	1440017..1440430	-	137	117619631	-	AHA_1325	-	quaternary ammonium compound-resistance protein QacE
1284	 65.51	0	1440450..1441142	-	230	117621248	-	AHA_1326	-	hypothetical protein
1285	 65.22	0	1441154..1441774	-	206	117620692	-	AHA_1327	-	propanediol utilization
1286	 65.34	0	1441771..1442223	-	150	117618322	-	AHA_1328	-	hypothetical protein
1287	 53.39	-1	1442236..1443222	-	328	117619687	-	AHA_1329	-	benzylsuccinate synthase activating enzyme
1288	 60.96	0	1443297..1445678	-	793	117621288	-	AHA_1330	-	pyruvate formate-lyase
1289	 66.84	0	1446709..1447863	-	384	117620564	-	AHA_1331	-	alcohol dehydrogenase, iron-containing
1290	 61.24	0	1447879..1448136	-	85	117620052	-	AHA_1332	-	ethanolamine utilization protein EutN/carboxysome structural protein Ccml
1291	 64.37	0	1448163..1449728	-	521	117619663	eutE	AHA_1333	-	acetaldehyde dehydrogenase (acetylating)
1292	 60.22	0	1449803..1450081	-	92	117621491	-	AHA_1334	-	ethanolamine utilization protein
1293	 58.95	0	1450096..1450380	-	94	117618230	-	AHA_1335	-	microcompartments family protein
1294	 56.99	0	1450397..1450675	-	92	117617905	-	AHA_1336	-	microcompartments family protein
1295	 56.52	-1	1451360..1451911	-	183	117619651	-	AHA_1337	-	hypothetical protein
1296	 55.93	-1	1451875..1452684	-	269	117620255	-	AHA_1338	-	transcriptional regulatory protein, C terminal
1297	 59.24	0	1452706..1453311	-	201	117618441	-	AHA_1339	-	TetR family transcriptional regulator
1298	 63.72	0	1453693..1454607	-	304	117621159	-	AHA_1340	-	LysR family transcriptional regulator
1299	 62.58	0	1454723..1455553	+	276	117621037	fdhD-1	AHA_1341	-	formate dehydrogenase family accessory protein FdhD
1300	 62.25	0	1455540..1457828	+	762	117620311	-	AHA_1342	-	oxidoreductase alpha (molybdopterin) subunit
1301	 64.10	0	1458106..1458846	-	246	117617982	-	AHA_1344	-	putative hydrolase
1302	 62.54	0	1459315..1459968	+	217	117621505	-	AHA_1345	-	PsrA protein
1303	 62.84	0	1460017..1462341	+	774	117618744	-	AHA_1346	-	acyl-CoA dehydrogenase
1304	 66.18	0	1462512..1465574	+	1020	117617974	-	AHA_1347	-	AcrB/AcrD/AcrF family protein
1305	 69.44	+1	1465590..1466636	+	348	117619873	-	AHA_1348	-	RND family efflux transporter MFP subunit
1306	 63.89	0	1466702..1468141	-	479	117620946	pyk-2	AHA_1349	-	pyruvate kinase
1307	 59.03	0	1468305..1469168	-	287	117621239	hexR	AHA_1350	-	DNA-binding transcriptional regulator HexR
1308	 65.33	0	1469509..1470477	+	322	117617931	glk	AHA_1351	-	glucokinase
1309	 63.28	0	1470777..1472135	-	452	117618416	-	AHA_1352	-	sensor protein PhoQ
1310	 61.58	0	1472159..1472866	-	235	117621514	-	AHA_1353	-	transcriptional regulatory protein PhoP
1311	 66.94	0	1472972..1475131	-	719	117620955	-	AHA_1354	-	RTX toxin transporter
1312	 65.93	0	1475134..1476498	-	454	117618037	rtxD	AHA_1355	-	RTX toxin transporter
1313	 63.27	0	1476495..1478582	-	695	117617499	rtxB	AHA_1356	-	RTX toxin transporter
1314	 49.62	-2	1478891..1479289	+	132	117619233	-	AHA_1357	-	hypothetical protein
1315	 54.44	-1	1479322..1479771	+	149	117618720	rtxC	AHA_1358	-	cytolysin-activating lysine-acyltransferase RtxC
1316	 64.40	0	1479789..1493846	+	4685	117618727	-	AHA_1359	-	structural toxin protein RtxA
1317	 60.61	0	1494201..1494695	+	164	117618044	-	AHA_1360	-	acetyltransferase
1318	 62.83	0	1494796..1496124	-	442	117617471	-	AHA_1361	-	hypothetical protein
1319	 61.40	0	1496176..1497486	+	436	117619250	-	AHA_1362	-	response regulator
1320	 62.93	0	1497715..1498491	+	258	117618637	-	AHA_1363	-	hypothetical protein
1321	 59.12	0	1498693..1499010	+	105	117618842	fliE	AHA_1364	-	flagellar hook-basal body complex protein FliE
1322	 62.45	0	1499098..1500780	+	560	117620247	fliF	AHA_1365	-	flagellar MS-ring protein
1323	 61.21	0	1500773..1501834	+	353	117619937	fliG	AHA_1366	-	flagellar motor switch protein G
1324	 66.67	0	1501899..1502705	+	268	117621397	fliH	AHA_1367	-	flagellar assembly protein FliH
1325	 66.29	0	1502778..1504109	+	443	117620954	fliI	AHA_1368	-	flagellum-specific ATP synthase
1326	 63.27	0	1504136..1504576	+	146	117617557	fliJ	AHA_1369	-	flagellar export protein FliJ
1327	 66.40	0	1504806..1506689	+	627	117618009	-	AHA_1370	-	putative flagellar hook-length control protein FliK
1328	 62.43	0	1506747..1507265	+	172	117620848	fliL	AHA_1371	-	flagellar basal body-associated protein FliL
1329	 62.09	0	1507275..1508345	+	356	117619656	fliM	AHA_1372	-	flagellar motor switch protein FliM
1330	 59.54	0	1508397..1508789	+	130	117618193	fliN	AHA_1373	-	flagellar motor switch protein FliN
1331	 61.46	0	1508786..1509169	+	127	117620531	fliO	AHA_1374	-	flagellar biosynthesis protein, FliO
1332	 60.13	0	1509156..1509935	+	259	117618724	fliP	AHA_1375	-	flagellar biosynthesis protein FliP
1333	 59.26	0	1509963..1510232	+	89	117619170	fliQ	AHA_1376	-	flagellar biosynthetic protein FliQ
1334	 61.74	0	1510300..1511091	+	263	117619054	fliR	AHA_1377	-	flagellar biosynthesis protein FliR
1335	 61.10	0	1511226..1512356	+	376	117617532	flhB	AHA_1378	-	flagellar biosynthetic protein FlhB
1336	 60.49	0	1512464..1514566	+	700	117621154	flhA	AHA_1379	-	flagellar biosynthesis protein FlhA
1337	 61.46	0	1514583..1516004	+	473	117618453	flhF	AHA_1380	-	flagellar biosynthesis protein FlhF
1338	 60.34	0	1516012..1516881	+	289	117617853	-	AHA_1381	-	CobQ/CobB/MinD/ParA family protein
1339	 57.22	0	1516874..1517593	+	239	117619369	fliA	AHA_1382	-	flagellar biosynthesis sigma factor
1340	 48.44	-2	1517705..1518088	+	127	117618753	cheY	AHA_1383	-	chemotaxis protein CheY
1341	 49.66	-2	1518101..1518841	+	246	117620241	cheZ	AHA_1384	-	chemotaxis protein CheZ
1342	 57.29	0	1518853..1521039	+	728	117619695	cheA-2	AHA_1385	-	chemotaxis protein CheA
1343	 59.05	0	1521072..1522187	+	371	117618143	cheB-2	AHA_1386	-	chemotaxis-specific methylesterase
1344	 56.15	-1	1522196..1522927	+	243	117619934	motA	AHA_1387	-	chemotaxis protein MotA
1345	 55.34	-1	1522930..1523856	+	308	117621479	-	AHA_1388	-	ompA family protein
1346	 55.72	-1	1523861..1524655	+	264	117620880	-	AHA_1389	-	CobQ/CobB/MinD/ParA family protein
1347	 58.08	0	1524652..1525524	+	290	117618032	-	AHA_1390	-	CheW domain-containing protein
1348	 57.67	0	1525594..1526082	+	162	117617456	cheW-2	AHA_1391	-	chemotaxis protein CheW
1349	 59.95	0	1526101..1526487	+	128	117619215	-	AHA_1392	-	ATPase involved in DNA repair
1350	 59.12	0	1526642..1527277	+	211	117620383	ccmA	AHA_1393	-	heme ABC exporter, ATP-binding protein CcmA
1351	 64.87	0	1527283..1527951	+	222	117620355	ccmB	AHA_1394	-	heme exporter protein CcmB
1352	 62.62	0	1528115..1528855	+	246	117619795	ccmC	AHA_1395	-	heme exporter protein C
1353	 60.87	0	1528858..1529064	+	68	117621290	-	AHA_1396	-	hypothetical protein
1354	 62.40	0	1529061..1529552	+	163	117618248	ccmE	AHA_1397	-	cytochrome c-type biogenesis protein CcmE
1355	 64.52	0	1529635..1531590	+	651	117618571	ccmF-1	AHA_1398	-	cytochrome c-type biogenesis protein CcmF
1356	 58.19	0	1531587..1532117	+	176	117620028	dsbE	AHA_1399	-	thiol:disulfide interchange protein DsbE
1357	 63.33	0	1532129..1532608	+	159	117619816	-	AHA_1400	-	cytochrome c-type biogenesis protein CcmH
1358	 63.69	0	1532605..1533879	+	424	117621459	-	AHA_1401	-	cytochrome c-type biogenesis protein CcmH
1359	 60.71	0	1533984..1534772	+	262	117621344	vacJ	AHA_1402	-	lipoprotein VacJ
1360	 58.29	0	1534899..1535483	-	194	117620827	-	AHA_1403	-	superoxide dismutase (Fe)
1361	 57.10	0	1535770..1536114	+	114	117617707	-	AHA_1404	-	putative glutaredoxin-like protein
1362	 62.10	0	1536192..1537505	-	437	117619085	-	AHA_1405	-	tRNA and rRNA cytosine-C5-methylase
1363	 65.34	0	1537565..1539595	+	676	117620487	-	AHA_1406	-	hypothetical protein
1364	 68.52	+1	1539592..1539915	+	107	117617653	-	AHA_1407	-	hypothetical protein
1365	 63.54	0	1540087..1540725	+	212