IslandPath Analysis: Aeromonas hydrophila subsp. hydrophila ATCC 7966



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 62.23   STD DEV: 5.38
Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome - 1..4744448
4122 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1042	 58.05	0	1181955..1182302	-	115	117617655	-	AHA_1081	-	hypothetical protein
1043	 55.78	-1	1182386..1182835	-	149	117618101	-	AHA_1082	-	hypothetical protein
1044	 52.78	-1	1182848..1183171	-	107	117619485	-	AHA_1083	-	hypothetical protein
1045	 58.97	0	1183418..1183768	+	116	117619251	-	AHA_1084	-	helix-turn-helix domain-containing protein
1046	 60.36	0	1183780..1184619	-	279	117621420	-	AHA_1085	-	hypothetical protein
1047	 60.91	0	1184757..1185746	-	329	117619943	-	AHA_1086	-	hypothetical protein
1048	 58.89	0	1185841..1186791	-	316	117618482	-	AHA_1087	-	hypothetical protein
1049	 64.33	0	1187154..1188308	-	384	117617955	-	AHA_1089	-	hypothetical protein
1050	 59.86	0	1188389..1189123	+	244	117617633	-	AHA_1090	-	hypothetical protein
1051	 62.50	0	1189139..1189570	+	143	117618769	-	AHA_1091	-	hypothetical protein
1052	 64.11	0	1189671..1190843	-	390	117618530	pheA	AHA_1092	-	chorismate mutase/prephenate dehydratase
1053	 45.83	-2	1190965..1191012	-	15	117618987	-	AHA_1093	-	Phe leader peptide
1054	 63.83	0	1191186..1191785	+	199	117620258	-	AHA_1094	-	hydrolase
1055	 53.05	-1	1191811..1192089	+	92	117619643	-	AHA_1095	-	hypothetical protein
1056	 63.46	0	1192135..1193007	+	290	117621478	-	AHA_1096	-	hypothetical protein
1057	 67.03	0	1193103..1193651	+	182	117620941	-	AHA_1097	-	hypothetical protein
1058	 59.21	0	1193836..1194465	+	209	117618324	-	AHA_1098	-	hypothetical protein
1059	 63.39	0	1194638..1195582	+	314	117617727	-	AHA_1099	-	hypothetical protein
1060	 69.03	+1	1195646..1196533	+	295	117620327	-	AHA_1100	-	MerR family transcriptional regulator
1061	 65.68	0	1196530..1197951	+	473	117618175	phrB	AHA_1101	-	deoxyribodipyrimidine photolyase
1062	 64.57	0	1197953..1198381	+	142	117617595	-	AHA_1102	-	putative transcriptional regulator
1063	 66.67	0	1198378..1199115	+	245	117621424	-	AHA_1103	-	short chain dehydrogenase/reductase family oxidoreductase
1064	 64.60	0	1199112..1200371	+	419	117620782	-	AHA_1104	-	amino-oxidase
1065	 64.37	0	1200368..1201150	+	260	117618378	-	AHA_1105	-	plasmid partition ParA protein
1066	 64.20	0	1201150..1202406	+	418	117620857	-	AHA_1106	-	cyclopropane-fatty-acyl-phospholipid synthase
1067	 56.16	-1	1202885..1203103	+	72	117619494	-	AHA_1107	-	hypothetical protein
1068	 66.67	0	1203120..1203611	+	163	117617951	-	AHA_1108	-	hypothetical protein
1069	 61.47	0	1203611..1204168	+	185	117620145	-	AHA_1109	-	putative lipoprotein
1070	 58.12	0	1204293..1204760	+	155	117618996	-	AHA_1110	-	DPS family protein
1071	 62.55	0	1205088..1206737	+	549	117618309	-	AHA_1111	-	hydroxylamine reductase
1072	 65.98	0	1206852..1207871	+	339	117617743	-	AHA_1112	-	iron-sulfur cluster-binding protein
1073	 62.18	0	1207957..1208982	+	341	117619556	galE-1	AHA_1113	-	UDP-glucose 4-epimerase
1074	 59.87	0	1209157..1209906	-	249	117621284	-	AHA_1114	-	outer membrane protein
1075	 42.71	-2	1209933..1210028	+	31	117618905	-	AHA_1115	-	hypothetical protein
1076	 58.62	0	1210730..1211524	+	264	117620077	-	AHA_1117	-	transcriptional activator protein AhyR/asaR
1077	 57.23	0	1211755..1212273	+	172	117617709	-	AHA_1118	-	HcpA-like protein
1078	 60.09	0	1212752..1215535	+	927	117619461	-	AHA_1119	-	Rhs element Vgr protein
1079	 55.43	-1	1215532..1216332	+	266	117621298	-	AHA_1120	-	type III secretion protein
1080	 52.89	-1	1216332..1218284	+	650	117617754	-	AHA_1121	-	hypothetical protein
1081	 50.64	-2	1218284..1218982	+	232	117620990	-	AHA_1122	-	hypothetical protein
1082	 48.58	-2	1219157..1219858	+	233	117621493	-	AHA_1123	-	hypothetical protein
1083	 67.23	0	1219986..1220870	-	294	117621187	-	AHA_1124	-	LysR family transcriptional regulator
1084	 65.51	0	1220980..1221759	+	259	117619966	budA	AHA_1125	-	alpha-acetolactate decarboxylase
1085	 66.73	0	1221787..1223457	+	556	117618354	alsS	AHA_1126	-	acetolactate synthase
1086	 71.16	+1	1223551..1224129	-	192	117620872	-	AHA_1127	-	4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme
1087	 65.82	0	1224163..1225110	-	315	117618856	panE	AHA_1128	-	2-dehydropantoate 2-reductase
1088	 56.73	-1	1225468..1225950	+	160	117619299	-	AHA_1129	-	nucleotide-binding protein
1089	 54.33	-1	1226053..1226895	-	280	117620259	-	AHA_1130	-	outer membrane protein
1090	 62.75	0	1227052..1228431	-	459	117618583	-	AHA_1131	-	muropeptide permease AmpG
1091	 60.87	0	1228962..1229513	-	183	117619979	-	AHA_1132	-	peptidyl-prolyl cis-trans isomerase B
1092	 61.26	0	1229529..1230101	-	190	117619442	-	AHA_1133	-	hypothetical protein
1093	 63.52	0	1230126..1231268	-	380	117617753	-	AHA_1134	-	putative ribosomal RNA small subunit methyltransferase D (rRNA (guanine-N(2)-)-methyltransferase)
1094	 62.78	0	1231475..1231783	+	102	117618337	-	AHA_1135	-	BolA protein
1095	 59.52	0	1232225..1233568	+	447	117620378	nqrA	AHA_1136	-	Na(+)-translocating NADH-quinone reductase subunit A
1096	 60.98	0	1233572..1234801	+	409	117621223	nqrB	AHA_1137	-	Na(+)-translocating NADH-quinone reductase subunit B
1097	 60.58	0	1234791..1235579	+	262	117619697	nqrC	AHA_1138	-	Na(+)-translocating NADH-quinone reductase subunit C
1098	 60.35	0	1235572..1236204	+	210	117620038	nqrD	AHA_1139	-	NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit
1099	 57.62	0	1236208..1236804	+	198	117618100	nqrE-1	AHA_1140	-	Na(+)-translocating NADH-quinone reductase subunit E
1100	 58.42	0	1236822..1238045	+	407	117618547	nqrF	AHA_1141	-	Na(+)-translocating NADH-quinone reductase subunit F
1101	 61.29	0	1238049..1239089	+	346	117621535	-	AHA_1142	-	thiamine biosynthesis lipoprotein ApbE
1102	 54.67	-1	1239101..1239325	+	74	117620992	-	AHA_1143	-	hypothetical protein
1103	 62.91	0	1239413..1239625	-	70	117619812	-	AHA_1144	-	hypothetical protein
1104	 66.57	0	1239758..1240810	+	350	117618729	dinB	AHA_1145	-	DNA polymerase IV
1105	 64.24	0	1240879..1243020	+	713	117620938	-	AHA_1146	-	methyl-accepting chemotaxis protein
1106	 62.98	0	1243304..1244224	+	306	117621405	gcvA	AHA_1147	-	DNA-binding transcriptional activator GcvA
1107	 63.38	0	1244217..1244855	+	212	117617575	-	AHA_1148	-	esterase/lipase/thioesterase family protein
1108	 60.98	0	1244888..1245274	+	128	117618639	-	AHA_1149	-	hypothetical protein
1109	 60.27	0	1245267..1246361	+	364	117619180	-	AHA_1150	-	putative RNA 2'-O-ribose methyltransferase
1110	 58.96	0	1246432..1246872	-	146	117618664	-	AHA_1151	-	hypothetical protein
1111	 62.10	0	1246993..1248000	-	335	117621076	-	AHA_1152	-	isocitrate dehydrogenase
1112	 65.01	0	1248147..1249052	-	301	117618346	xni	AHA_1153	-	exodeoxyribonuclease IX
1113	 63.42	0	1249081..1250436	-	451	117620953	-	AHA_1154	-	lysine decarboxylase family protein
1114	 62.41	0	1250587..1252206	-	539	117618806	-	AHA_1155	-	GGDEF domain-containing protein
1115	 62.04	0	1252297..1254567	-	756	117619372	-	AHA_1156	-	TPR repeat-containing protein
1116	 64.36	0	1254702..1255610	-	302	117619568	queF	AHA_1157	-	7-cyano-7-deazaguanine reductase
1117	 65.03	0	1255708..1256256	+	182	117620266	-	AHA_1158	-	Syd protein
1118	 64.12	0	1256326..1257111	-	261	117619901	-	AHA_1159	-	Zn-ribbon-containing protein
1119	 64.98	0	1257500..1257736	-	78	117619596	-	AHA_1160	-	hypothetical protein
1120	 63.33	0	1257794..1258093	-	99	117620879	-	AHA_1161	-	hypothetical protein
1121	 65.31	0	1258163..1259191	-	342	117617457	-	AHA_1162	-	hypothetical protein
1122	 61.61	0	1259455..1259790	+	111	117619606	-	AHA_1163	-	hypothetical protein
1123	 63.05	0	1259787..1260560	+	257	117619994	-	AHA_1164	-	RNA pseudouridine synthase family protein
1124	 62.13	0	1260637..1261077	+	146	117620479	-	AHA_1165	-	protein MioC
1125	 53.42	-1	1261489..1262922	+	477	117620897	lamB	AHA_1166	-	maltoporin
1126	 58.56	0	1262999..1263985	+	328	117621347	-	AHA_1167	-	maltose operon periplasmic protein
1127	 59.33	0	1264417..1265847	+	476	117617692	ptsG	AHA_1168	-	glucose-specific PTS system IIBC components
1128	 54.17	-1	1266028..1266411	-	127	117618126	-	AHA_1169	-	hypothetical protein
1129	 63.04	0	1266540..1267367	-	275	117619705	dapD	AHA_1170	-	2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase
1130	 64.86	0	1267534..1270188	-	884	117618353	glnD	AHA_1171	-	protein-P-II uridylyltransferase
1131	 60.46	0	1270286..1271074	-	262	117617959	map	AHA_1172	-	methionine aminopeptidase, type I
1132	 53.64	-1	1271434..1272162	+	242	117621095	rpsB	AHA_1173	-	ribosomal protein S2
1133	 56.01	-1	1272267..1273148	+	293	117620642	tsf	AHA_1174	-	elongation factor Ts
1134	 57.14	0	1273220..1273954	+	244	117620238	pyrH	AHA_1175	-	uridylate kinase
1135	 58.42	0	1274049..1274606	+	185	117619336	frr	AHA_1176	-	ribosome recycling factor
1136	 61.00	0	1274679..1275455	+	258	117618835	uppS	AHA_1177	-	undecaprenyl diphosphate synthase
1137	 61.19	0	1275482..1276339	+	285	117619293	cdsA	AHA_1178	-	phosphatidate cytidylyltransferase
1138	 65.41	0	1276403..1277596	+	397	117618840	dxr	AHA_1179	-	1-deoxy-D-xylulose 5-phosphate reductoisomerase
1139	 62.82	0	1277679..1279031	+	450	117618480	ecfE	AHA_1180	-	peptidase EcfE
1140	 60.19	0	1279066..1281489	+	807	117620894	-	AHA_1181	-	OMP85 family outer membrane protein
1141	 55.75	-1	1281638..1282150	+	170	117619682	-	AHA_1182	-	outer membrane protein
62.23	MEAN

5.38	STD DEV




Last Updated: De