IslandPathversion 1.0

IslandPath Analysis: Aeromonas hydrophila subsp. hydrophila ATCC 7966



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 62.23 STD DEV: 5.38
Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome - 1..4744448
4122 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1004	 61.88	0	1124894..1126753	+	619	117619679	-	AHA_1043	-	U32 family peptidase
1005	 65.61	0	1126842..1127504	+	220	117620257	-	AHA_1044	-	hypothetical protein
1006	 65.20	0	1127520..1127996	-	158	117620809	-	AHA_1045	-	methylated-DNA--protein-cysteine methyltransferase
1007	 68.97	+1	1127993..1129558	-	521	117617794	-	AHA_1046	-	helix-turn-helix, AraC type:HhH-GPD:Ada, metal-binding:AlkA, N-terminal
1008	 66.42	0	1129768..1130169	+	133	117618305	-	AHA_1047	-	hypothetical protein
1009	 66.35	0	1130239..1131813	-	524	117618915	-	AHA_1048	-	thermostable carboxypeptidase 1
1010	 65.29	0	1131851..1132432	-	193	117619007	-	AHA_1049	-	Smr domain-containing protein
1011	 49.46	-2	1132586..1132771	-	61	117618263	-	AHA_1050	-	hypothetical protein
1012	 66.11	0	1132904..1133797	-	297	117617790	-	AHA_1051	-	GumN protein
1013	 69.08	+1	1134385..1135212	-	275	117620201	-	AHA_1052	-	short-chain dehydrogenase/reductase
1014	 59.06	0	1135331..1136776	-	481	117619530	-	AHA_1053	-	putative outermembrane porin
1015	 68.47	+1	1137283..1139220	-	645	117618935	-	AHA_1054	-	methyl-accepting chemotaxis protein
1016	 69.01	+1	1139338..1140234	-	298	117618972	-	AHA_1055	-	hypothetical protein
1017	 65.34	0	1140329..1141831	-	500	117618340	-	AHA_1056	-	GntP
1018	 66.35	0	1141828..1142772	-	314	117617764	-	AHA_1057	-	NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR:3-beta hydroxysteroid dehydrogenase/isomerase:dTDP-4-dehydrorhamnose reductase
1019	 65.25	0	1142808..1143581	-	257	117618816	-	AHA_1058	-	AP endonuclease
1020	 63.98	0	1143578..1144210	-	210	117620657	-	AHA_1059	-	putative aldolase
1021	 67.23	0	1144203..1145453	-	416	117617878	-	AHA_1060	-	YgbK domain-containing protein
1022	 68.21	+1	1145450..1146358	-	302	117621054	-	AHA_1061	-	6-phosphogluconate dehydrogenase
1023	 61.74	0	1146614..1147405	+	263	117620653	-	AHA_1062	-	DeoR family transcriptional regulator
1024	 57.73	0	1147784..1150480	-	898	117620364	-	AHA_1063	-	hypothetical protein
1025	 57.00	0	1151726..1154476	+	916	117619710	-	AHA_1064	-	invasin family protein
1026	 54.56	-1	1154664..1155332	+	222	117617869	-	AHA_1065	-	hypothetical protein
1027	 54.54	-1	1155644..1157251	+	535	117619507	-	AHA_1066	-	intimin/invasin family protein
1028	 38.15	-2	1157771..1158517	+	248	117619415	-	AHA_1067	-	hypothetical protein
1029	 36.04	-2	1158514..1160730	+	738	117621295	-	AHA_1068	-	sensory box/GGDEF family protein
1030	 35.28	-2	1161152..1161820	-	222	117618691	-	AHA_1069	-	transcriptional regulator
1031	 34.01	-2	1162913..1163206	+	97	117620015	-	AHA_1070	-	transcriptional activator protein
1032	 53.74	-1	1163620..1163766	-	48	117619583	-	AHA_1071	-	hypothetical protein
1033	 61.98	0	1164200..1165459	-	419	117620812	-	AHA_1072	-	protein UmuC
1034	 59.23	0	1165440..1165883	-	147	117621500	-	AHA_1073	-	protein UmuD
1035	 50.09	-2	1166357..1168504	+	715	117617605	-	AHA_1074	-	hypothetical protein
1036	 50.19	-2	1168501..1170042	+	513	117618170	-	AHA_1075	-	hypothetical protein
1037	 47.59	-2	1169945..1175374	+	1809	117620176	-	AHA_1076	-	hypothetical protein
1038	 40.06	-2	1175428..1176750	-	440	117620606	-	AHA_1077	-	modification methylase DdeI
1039	 48.94	-2	1178163..1180091	-	642	117617679	-	AHA_1078	-	hypothetical protein
1040	 58.38	0	1180233..1180763	-	176	117620845	-	AHA_1079	-	putative DNA repair protein RadC
1041	 57.98	0	1181510..1181935	-	141	117621319	-	AHA_1080	-	hypothetical protein
1042	 58.05	0	1181955..1182302	-	115	117617655	-	AHA_1081	-	hypothetical protein
1043	 55.78	-1	1182386..1182835	-	149	117618101	-	AHA_1082	-	hypothetical protein
1044	 52.78	-1	1182848..1183171	-	107	117619485	-	AHA_1083	-	hypothetical protein
1045	 58.97	0	1183418..1183768	+	116	117619251	-	AHA_1084	-	helix-turn-helix domain-containing protein
1046	 60.36	0	1183780..1184619	-	279	117621420	-	AHA_1085	-	hypothetical protein
1047	 60.91	0	1184757..1185746	-	329	117619943	-	AHA_1086	-	hypothetical protein
1048	 58.89	0	1185841..1186791	-	316	117618482	-	AHA_1087	-	hypothetical protein
1049	 64.33	0	1187154..1188308	-	384	117617955	-	AHA_1089	-	hypothetical protein
1050	 59.86	0	1188389..1189123	+	244	117617633	-	AHA_1090	-	hypothetical protein
1051	 62.50	0	1189139..1189570	+	143	117618769	-	AHA_1091	-	hypothetical protein
1052	 64.11	0	1189671..1190843	-	390	117618530	pheA	AHA_1092	-	chorismate mutase/prephenate dehydratase
1053	 45.83	-2	1190965..1191012	-	15	117618987	-	AHA_1093	-	Phe leader peptide
1054	 63.83	0	1191186..1191785	+	199	117620258	-	AHA_1094	-	hydrolase
1055	 53.05	-1	1191811..1192089	+	92	117619643	-	AHA_1095	-	hypothetical protein
1056	 63.46	0	1192135..1193007	+	290	117621478	-	AHA_1096	-	hypothetical protein
1057	 67.03	0	1193103..1193651	+	182	117620941	-	AHA_1097	-	hypothetical protein
1058	 59.21	0	1193836..1194465	+	209	117618324	-	AHA_1098	-	hypothetical protein
1059	 63.39	0	1194638..1195582	+	314	117617727	-	AHA_1099	-	hypothetical protein
1060	 69.03	+1	1195646..1196533	+	295	117620327	-	AHA_1100	-	MerR family transcriptional regulator
1061	 65.68	0	1196530..1197951	+	473	117618175	phrB	AHA_1101	-	deoxyribodipyrimidine photolyase
1062	 64.57	0	1197953..1198381	+	142	117617595	-	AHA_1102	-	putative transcriptional regulator
1063	 66.67	0	1198378..1199115	+	245	117621424	-	AHA_1103	-	short chain dehydrogenase/reductase family oxidoreductase
1064	 64.60	0	1199112..1200371	+	419	117620782	-	AHA_1104	-	amino-oxidase
1065	 64.37	0	1200368..1201150	+	260	117618378	-	AHA_1105	-	plasmid partition ParA protein
1066	 64.20	0	1201150..1202406	+	418	117620857	-	AHA_1106	-	cyclopropane-fatty-acyl-phospholipid synthase
1067	 56.16	-1	1202885..1203103	+	72	117619494	-	AHA_1107	-	hypothetical protein
1068	 66.67	0	1203120..1203611	+	163	117617951	-	AHA_1108	-	hypothetical protein
1069	 61.47	0	1203611..1204168	+	185	117620145	-	AHA_1109	-	putative lipoprotein
1070	 58.12	0	1204293..1204760	+	155	117618996	-	AHA_1110	-	DPS family protein
1071	 62.55	0	1205088..1206737	+	549	117618309	-	AHA_1111	-	hydroxylamine reductase
1072	 65.98	0	1206852..1207871	+	339	117617743	-	AHA_1112	-	iron-sulfur cluster-binding protein
1073	 62.18	0	1207957..1208982	+	341	117619556	galE-1	AHA_1113	-	UDP-glucose 4-epimerase
1074	 59.87	0	1209157..1209906	-	249	117621284	-	AHA_1114	-	outer membrane protein
1075	 42.71	-2	1209933..1210028	+	31	117618905	-	AHA_1115	-	hypothetical protein
1076	 58.62	0	1210730..1211524	+	264	117620077	-	AHA_1117	-	transcriptional activator protein AhyR/asaR
1077	 57.23	0	1211755..1212273	+	172	117617709	-	AHA_1118	-	HcpA-like protein
1078	 60.09	0	1212752..1215535	+	927	117619461	-	AHA_1119	-	Rhs element Vgr protein
1079	 55.43	-1	1215532..1216332	+	266	117621298	-	AHA_1120	-	type III secretion protein
1080	 52.89	-1	1216332..1218284	+	650	117617754	-	AHA_1121	-	hypothetical protein
1081	 50.64	-2	1218284..1218982	+	232	117620990	-	AHA_1122	-	hypothetical protein
1082	 48.58	-2	1219157..1219858	+	233	117621493	-	AHA_1123	-	hypothetical protein
1083	 67.23	0	1219986..1220870	-	294	117621187	-	AHA_1124	-	LysR family transcriptional regulator
1084	 65.51	0	1220980..1221759	+	259	117619966	budA	AHA_1125	-	alpha-acetolactate decarboxylase
1085	 66.73	0	1221787..1223457	+	556	117618354	alsS	AHA_1126	-	acetolactate synthase
1086	 71.16	+1	1223551..1224129	-	192	117620872	-	AHA_1127	-	4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme
1087	 65.82	0	1224163..1225110	-	315	117618856	panE	AHA_1128	-	2-dehydropantoate 2-reductase
1088	 56.73	-1	1225468..1225950	+	160	117619299	-	AHA_1129	-	nucleotide-binding protein
1089	 54.33	-1	1226053..1226895	-	280	117620259	-	AHA_1130	-	outer membrane protein
1090	 62.75	0	1227052..1228431	-	459	117618583	-	AHA_1131	-	muropeptide permease AmpG
1091	 60.87	0	1228962..1229513	-	183	117619979	-	AHA_1132	-	peptidyl-prolyl cis-trans isomerase B
1092	 61.26	0	1229529..1230101	-	190	117619442	-	AHA_1133	-	hypothetical protein
1093	 63.52	0	1230126..1231268	-	380	117617753	-	AHA_1134	-	putative ribosomal RNA small subunit methyltransferase D (rRNA (guanine-N(2)-)-methyltransferase)
1094	 62.78	0	1231475..1231783	+	102	117618337	-	AHA_1135	-	BolA protein
1095	 59.52	0	1232225..1233568	+	447	117620378	nqrA	AHA_1136	-	Na(+)-translocating NADH-quinone reductase subunit A
1096	 60.98	0	1233572..1234801	+	409	117621223	nqrB	AHA_1137	-	Na(+)-translocating NADH-quinone reductase subunit B
1097	 60.58	0	1234791..1235579	+	262	117619697	nqrC	AHA_1138	-	Na(+)-translocating NADH-quinone reductase subunit C
1098	 60.35	0	1235572..1236204	+	210	117620038	nqrD	AHA_1139	-	NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit
1099	 57.62	0	1236208..1236804	+	198	117618100	nqrE-1	AHA_1140	-	Na(+)-translocating NADH-quinone reductase subunit E
1100	 58.42	0	1236822..1238045	+	407	117618547	nqrF	AHA_1141	-	Na(+)-translocating NADH-quinone reductase subunit F
1101	 61.29	0	1238049..1239089	+	346	117621535	-	AHA_1142	-	thiamine biosynthesis lipoprotein ApbE
1102	 54.67	-1	1239101..1239325	+	74	117620992	-	AHA_1143	-	hypothetical protein
1103	 62.91	0	1239413..1239625	-	70	117619812	-	AHA_1144	-	hypothetical protein
62.23	MEAN

5.38	STD DEV



Last Updated: Dec 04, 2008