version 1.0
Actinobacillus succinogenes 130Z, complete genome - 1..2319663 2079 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 260 50.14 +1 296545..297633 - 362 152977948 - Asuc_0263 - 3-dehydroquinate synthase 261 45.08 0 297707..298234 - 175 152977949 - Asuc_0264 - shikimate kinase 262 48.43 0 298524..300530 - 668 152977950 - Asuc_0265 - transketolase 263 41.83 0 300974..301762 - 262 152977951 - Asuc_0267 - transcriptional regulator IclR 264 46.75 0 301939..302937 + 332 152977952 - Asuc_0268 - 2,3-diketo-L-gulonate reductase 265 43.88 0 303040..303513 + 157 152977953 - Asuc_0269 - hypothetical protein 266 43.06 0 303510..303992 + 160 152977954 - Asuc_0270 - tripartite ATP-independent periplasmic transporter DctQ 267 46.01 0 303989..305266 + 425 152977955 - Asuc_0271 - TRAP dicarboxylate transporter, DctM subunit 268 44.68 0 305339..306325 + 328 152977956 - Asuc_0272 - TRAP dicarboxylate transporter, DctP subunit 269 46.36 0 306385..307374 + 329 152977957 - Asuc_0273 - TRAP dicarboxylate transporter, DctP subunit 270 48.49 0 307447..308904 + 485 152977958 - Asuc_0274 - carbohydrate kinase FGGY 271 44.38 0 309022..310008 - 328 152977959 - Asuc_0275 - bile acid:sodium symporter 272 45.92 0 310362..311267 - 301 152977960 - Asuc_0276 - MscS mechanosensitive ion channel 273 45.29 0 311359..312303 - 314 152977961 - Asuc_0277 - lysophospholipase 274 46.99 0 312372..313484 - 370 152977962 - Asuc_0278 - aspartate-semialdehyde dehydrogenase 275 49.03 0 313706..314890 - 394 152977963 - Asuc_0279 - elongation factor Tu 276 41.56 0 314960..317062 - 700 152977964 - Asuc_0280 - elongation factor G 277 41.19 0 317161..317631 - 156 152977965 - Asuc_0281 - 30S ribosomal protein S7 278 41.49 0 317739..318167 - 142 152977966 - Asuc_0282 - 30S ribosomal protein S12 279 30.76 -2 318248..318907 - 219 152977967 - Asuc_0283 - regulator of competence-specific genes 280 45.42 0 324953..326458 - 501 152977968 - Asuc_0284 - sodium:neurotransmitter symporter 281 45.95 0 326675..327229 + 184 152977969 - Asuc_0285 - hypothetical protein 282 46.91 0 327457..328428 + 323 152977970 - Asuc_0286 - PTS system mannose/fructose/sorbose family IIA subunit 283 50.13 +1 328443..329240 + 265 152977971 - Asuc_0287 - PTS system mannose/fructose/sorbose family IIC subunit 284 48.91 0 329255..330082 + 275 152977972 - Asuc_0288 - PTS system mannose/fructose/sorbose family IID subunit 285 43.75 0 330189..330572 + 127 152977973 - Asuc_0289 - hypothetical protein 286 48.10 0 330569..331069 + 166 152977974 - Asuc_0290 - molybdopterin-guanine dinucleotide biosynthesis protein B 287 50.32 +1 331072..332496 + 474 152977975 - Asuc_0291 - EmrB/QacA family drug resistance transporter 288 45.64 0 332641..333363 - 240 152977976 - Asuc_0292 - MgtC/SapB transporter 289 53.10 +1 333501..334178 - 225 152977977 - Asuc_0293 - competence protein F 290 46.49 0 334491..334946 + 151 152977978 - Asuc_0294 - NUDIX hydrolase 291 50.10 +1 334947..335423 - 158 152977979 - Asuc_0295 - transcription elongation factor GreB 292 47.18 0 335606..336190 + 194 152977980 - Asuc_0296 - putative DNA uptake protein 293 46.88 0 336244..336819 + 191 152977981 - Asuc_0297 - DNA-3-methyladenine glycosylase I 294 47.15 0 336925..337713 + 262 152977982 - Asuc_0298 - extracellular solute-binding protein 295 48.54 0 337703..338419 + 238 152977983 - Asuc_0299 - polar amino acid ABC transporter, inner membrane subunit 296 47.20 0 338435..339184 + 249 152977984 - Asuc_0300 - ABC transporter related 297 46.56 0 339433..340740 - 435 152977985 - Asuc_0301 - sodium ion-translocating decarboxylase, beta subunit 298 48.31 0 340751..342559 - 602 152977986 - Asuc_0302 - pyruvate carboxylase subunit B 299 43.70 0 342579..342848 - 89 152977987 - Asuc_0303 - oxaloacetate decarboxylase subunit gamma 300 44.52 0 343007..344284 - 425 152977988 - Asuc_0304 - anion transporter 301 41.62 0 344511..345560 - 349 152977989 - Asuc_0305 - citrate lyase ligase 302 41.85 0 345617..346450 - 277 152977990 - Asuc_0306 - hypothetical protein 303 43.94 0 346530..346859 - 109 152977991 - Asuc_0307 - hypothetical protein 304 40.45 -1 346873..347490 - 205 152977992 - Asuc_0308 - DSBA oxidoreductase 305 36.67 -2 347501..347770 - 89 152977993 - Asuc_0309 - hypothetical protein 306 43.68 0 347845..348414 + 189 152977994 - Asuc_0310 - molybdopterin-guanine dinucleotide biosynthesis protein A 307 43.67 0 348433..349332 + 299 152977995 - Asuc_0311 - aldo/keto reductase 308 45.52 0 349444..351519 - 691 152977996 - Asuc_0312 - 4-alpha-glucanotransferase 309 43.59 0 351600..353969 - 789 152977997 - Asuc_0313 - glycogen/starch/alpha-glucan phosphorylase 310 41.62 0 354073..356859 + 928 152977998 - Asuc_0314 - transcriptional regulator MalT 311 44.56 0 356912..358969 - 685 152977999 - Asuc_0315 - periplasmic alpha-amylase precursor 312 45.34 0 359119..360009 - 296 152978000 - Asuc_0316 - maltose transporter permease 313 39.78 -1 360063..361598 - 511 152978001 - Asuc_0317 - maltose transporter membrane protein 314 41.31 0 361680..362870 - 396 152978002 - Asuc_0318 - maltose ABC transporter periplasmic protein 315 40.46 -1 362890..364095 - 401 152978003 - Asuc_0319 - maltose ABC transporter periplasmic protein 316 40.39 -1 364446..365564 + 372 152978004 - Asuc_0320 - maltose/maltodextrin transporter ATP-binding protein 317 39.04 -1 365581..366912 + 443 152978005 - Asuc_0321 - alpha amylase catalytic region 318 41.45 0 366941..368233 + 430 152978006 - Asuc_0322 - maltoporin 319 41.44 0 368401..369288 + 295 152978007 - Asuc_0323 - maltose regulon periplasmic protein 320 38.57 -1 369370..370152 - 260 152978008 - Asuc_0324 - Cof-like hydrolase 321 40.56 -1 370273..370701 - 142 152978009 - Asuc_0325 - F0F1 ATP synthase subunit epsilon 322 45.46 0 370741..372117 - 458 152978010 - Asuc_0326 - F0F1 ATP synthase subunit beta 323 41.03 -1 372133..373002 - 289 152978011 - Asuc_0327 - F0F1 ATP synthase subunit gamma 324 43.45 0 373021..374562 - 513 152978012 - Asuc_0328 - F0F1 ATP synthase subunit alpha 325 38.79 -1 374578..375108 - 176 152978013 - Asuc_0329 - F0F1 ATP synthase subunit delta 326 40.55 -1 375122..375592 - 156 152978014 - Asuc_0330 - F0F1 ATP synthase subunit B 327 36.86 -1 375660..375914 - 84 152978015 - Asuc_0331 - F0F1 ATP synthase subunit C 328 39.19 -1 375971..376756 - 261 152978016 - Asuc_0332 - F0F1 ATP synthase subunit A 329 33.85 -2 376771..377154 - 127 152978017 - Asuc_0333 - F0F1 ATP synthase subunit I 330 39.31 -1 377435..378070 - 211 152978018 - Asuc_0334 - glucose-inhibited division protein B 331 46.30 0 378060..379949 - 629 152978019 - Asuc_0335 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 332 43.79 0 380457..382838 + 793 152978020 - Asuc_0336 - organic solvent tolerance protein 333 45.93 0 382909..383718 - 269 152978021 - Asuc_0337 - shikimate 5-dehydrogenase 334 44.93 0 383721..384272 - 183 152978022 - Asuc_0338 - SUA5/yciO/yrdC domain-containing protein 335 46.08 0 384269..384817 - 182 152978023 - Asuc_0339 - DNA topoisomerase type IA Zn finger domain-containing protein 336 44.76 0 384896..386365 + 489 152978024 - Asuc_0340 - hypothetical protein 337 49.89 +1 386512..386946 - 144 152978025 - Asuc_0341 - D-tyrosyl-tRNA(Tyr) deacylase 338 43.75 0 386943..387806 - 287 152978026 - Asuc_0342 - ribonuclease BN 339 44.52 0 387803..388267 - 154 152978027 - Asuc_0343 - hypothetical protein 340 47.90 0 388416..389918 + 500 152978028 - Asuc_0344 - protein of unknown function DUF853 NPT hydrolase putative 341 50.21 +1 389981..392557 + 858 152978029 - Asuc_0345 - DNA mismatch repair protein 342 48.87 0 392566..392874 + 102 152978030 - Asuc_0346 - frataxin-like protein 343 47.15 0 392874..394718 + 614 152978031 - Asuc_0347 - ATP-dependent DNA helicase RecQ 344 45.60 0 394853..395227 + 124 152978032 - Asuc_0348 - hypothetical protein 345 44.64 0 395363..395884 + 173 152978033 - Asuc_0349 - ATP-dependent protease peptidase subunit 346 45.48 0 395960..397285 + 441 152978034 - Asuc_0350 - ATP-dependent protease ATP-binding subunit 347 46.86 0 397467..398486 - 339 152978035 - Asuc_0351 - HCP oxidoreductase, NADH-dependent 348 44.89 0 398576..400237 - 553 152978036 - Asuc_0352 - hydroxylamine reductase 349 44.34 0 400441..401703 - 420 152978037 - Asuc_0353 - HemY protein 350 46.21 0 401715..403151 - 478 152978038 - Asuc_0354 - protein of unknown function DUF513 hemX 351 49.60 0 403161..403910 - 249 152978039 - Asuc_0355 - uroporphyrinogen III synthase HEM4 352 48.82 0 403931..404860 - 309 152978040 - Asuc_0356 - porphobilinogen deaminase 353 47.46 0 404994..405977 + 327 152978041 - Asuc_0357 - alanine racemase 354 44.36 0 406088..407311 + 407 152978042 - Asuc_0358 - nucleoside:H symporter 355 47.06 0 407313..408368 + 351 152978043 - Asuc_0359 - xylose isomerase domain-containing protein 356 46.96 0 408380..409531 + 383 152978044 - Asuc_0360 - oxidoreductase domain-containing protein 357 43.96 0 409689..412229 + 846 152978045 - Asuc_0361 - adenylate cyclase 358 43.33 0 412438..413067 + 209 152978046 - Asuc_0362 - two component LuxR family transcriptional regulator 359 47.96 0 413332..415170 + 612 152978047 - Asuc_0363 - surface antigen (D15) 45.47 MEAN 4.33 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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