version 1.0
Actinobacillus succinogenes 130Z, complete genome - 1..2319663 2079 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 184 44.35 0 222162..222905 + 247 152977872 - Asuc_0186 - GntR family transcriptional regulator 185 48.38 0 223172..223789 - 205 152977873 - Asuc_0187 - glutathione S-transferase domain-containing protein 186 47.92 0 223802..225049 - 415 152977874 - Asuc_0188 - diaminopimelate decarboxylase 187 44.87 0 225059..225214 - 51 152977875 - Asuc_0189 - hypothetical protein 188 46.11 0 225225..225584 - 119 152977876 - Asuc_0190 - diacylglycerol kinase 189 49.98 +1 225628..227850 - 740 152977877 - Asuc_0191 - (p)ppGpp synthetase I, SpoT/RelA 190 50.53 +1 227863..229182 - 439 152977878 - Asuc_0192 - 23S rRNA 5-methyluridine methyltransferase 191 50.98 +1 229206..229919 - 237 152977879 - Asuc_0193 - DNA repair protein RecO 192 40.00 -1 230137..230556 + 139 152977880 - Asuc_0194 - D-ribose pyranase 193 41.38 0 230566..232068 + 500 152977881 - Asuc_0195 - D-ribose transporter ATP binding protein 194 42.11 0 232078..233046 + 322 152977882 - Asuc_0196 - ribose ABC transporter permease protein 195 44.71 0 233066..233944 + 292 152977883 - Asuc_0197 - D-ribose transporter subunit RbsB 196 53.27 +1 234004..234936 + 310 152977884 - Asuc_0198 - ribokinase 197 52.28 +1 234972..235979 + 335 152977885 - Asuc_0199 - periplasmic binding protein/LacI transcriptional regulator 198 51.78 +1 236063..236794 + 243 152977886 - Asuc_0200 - hypothetical protein 199 48.51 0 236806..237411 + 201 152977887 - Asuc_0201 - hypothetical protein 200 55.56 +2 237411..237833 + 140 152977888 - Asuc_0202 - Holliday junction resolvase-like protein 201 45.77 0 237942..239219 - 425 152977889 - Asuc_0203 - sn-glycerol-3-phosphate dehydrogenase subunit C 202 51.97 +1 239221..240513 - 430 152977890 - Asuc_0204 - anaerobic glycerol-3-phosphate dehydrogenase subunit B 203 51.01 +1 240503..242182 - 559 152977891 - Asuc_0205 - sn-glycerol-3-phosphate dehydrogenase subunit A 204 42.61 0 242333..242623 - 96 152977892 - Asuc_0206 - antibiotic biosynthesis monooxygenase 205 44.44 0 242700..245012 - 770 152977893 - Asuc_0207 - formate acetyltransferase 206 46.74 0 245099..245956 - 285 152977894 - Asuc_0208 - formate/nitrite transporter 207 49.72 0 246234..246587 + 117 152977895 - Asuc_0209 - histidine triad (HIT) protein 208 46.89 0 246584..246937 + 117 152977896 - Asuc_0210 - hypothetical protein 209 51.30 +1 246939..247979 + 346 152977897 - Asuc_0211 - beta-hexosaminidase 210 48.61 0 248489..249640 + 383 152977898 - Asuc_0212 - 23S rRNA methyluridine methyltransferase 211 50.95 +1 249814..251022 - 402 152977899 - Asuc_0213 - mandelate racemase/muconate lactonizing protein 212 49.78 0 251141..252064 + 307 152977900 - Asuc_0214 - LysR family transcriptional regulator 213 45.70 0 252108..253013 - 301 152977901 - Asuc_0215 - LysR family transcriptional regulator 214 46.71 0 253156..253596 + 146 152977902 - Asuc_0216 - hypothetical protein 215 49.84 +1 253666..254307 - 213 152977903 - Asuc_0217 - lysine exporter protein LysE/YggA 216 52.00 +1 254425..255099 + 224 152977904 - Asuc_0218 - ribulose-phosphate 3-epimerase 217 50.07 +1 255108..255782 + 224 152977905 - Asuc_0219 - phosphoglycolate phosphatase 218 47.06 0 255826..256830 + 334 152977906 - Asuc_0220 - tryptophanyl-tRNA synthetase 219 45.64 0 257034..258650 - 538 152977907 - Asuc_0221 - phosphoenolpyruvate carboxykinase 220 50.52 +1 258859..259725 - 288 152977908 - Asuc_0222 - Hsp33-like chaperonin 221 49.64 0 259839..260249 - 136 152977909 - Asuc_0223 - RNA-binding S4 domain-containing protein 222 48.94 0 260321..260884 + 187 152977910 - Asuc_0224 - ADP-ribose diphosphatase NudE 223 49.80 +1 260931..261677 - 248 152977911 - Asuc_0225 - short-chain dehydrogenase/reductase SDR 224 50.06 +1 261798..262610 + 270 152977912 - Asuc_0226 - 3'(2'),5'-bisphosphate nucleotidase 225 50.00 +1 262680..264167 + 495 152977913 - Asuc_0227 - glucose-6-phosphate 1-dehydrogenase 226 49.57 0 264298..264999 + 233 152977914 - Asuc_0228 - 6-phosphogluconolactonase 227 42.95 0 265027..265473 + 148 152977915 - Asuc_0229 - hypothetical protein 228 49.14 0 265512..266207 + 231 152977916 - Asuc_0230 - aspartate racemase 229 47.35 0 266217..266480 + 87 152977917 - Asuc_0231 - hypothetical protein 230 48.87 0 267356..268810 + 484 152977918 - Asuc_0232 - 6-phosphogluconate dehydrogenase 231 49.69 0 268926..269249 + 107 152977919 - Asuc_0233 - hypothetical protein 232 47.33 0 269430..270122 - 230 152977920 - Asuc_0234 - L-ribulose-5-phosphate 4-epimerase 233 43.44 0 270116..270976 - 286 152977921 - Asuc_0235 - putative L-xylulose 5-phosphate 3-epimerase 234 42.30 0 271010..271756 - 248 152977922 - Asuc_0236 - transcriptional repressor UlaR 235 47.71 0 271859..272950 - 363 152977923 - Asuc_0237 - putative L-ascorbate 6-phosphate lactonase 236 47.43 0 273323..275095 + 590 152977924 - Asuc_0238 - ascorbate-specific PTS system enzyme IIC/IIB 237 48.72 0 275166..275633 + 155 152977925 - Asuc_0239 - putative PTS IIA-like nitrogen-regulatory protein PtsN 238 48.97 0 275696..276373 + 225 152977926 - Asuc_0240 - 3-keto-L-gulonate-6-phosphate decarboxylase 239 54.13 +2 277027..277728 - 233 152977927 - Asuc_0242 - peptidylprolyl isomerase FKBP-type 240 46.92 0 277816..278514 - 232 152977928 - Asuc_0243 - hypothetical protein 241 47.55 0 278720..279148 - 142 152977929 - Asuc_0244 - hypothetical protein 242 44.96 0 279205..279591 - 128 152977930 - Asuc_0245 - large conductance mechanosensitive channel protein 243 48.73 0 279672..281048 - 458 152977931 - Asuc_0246 - potassium transporter peripheral membrane component 244 49.29 0 281225..281857 + 210 152977932 - Asuc_0247 - pyridoxamine 5'-phosphate oxidase 245 41.67 0 281866..282117 + 83 152977933 - Asuc_0248 - hypothetical protein 246 44.27 0 282228..282803 + 191 152977934 - Asuc_0249 - RNA polymerase sigma factor RpoE 247 47.52 0 282826..283389 + 187 152977935 - Asuc_0250 - anti sigma-E protein, RseA 248 44.20 0 283472..284428 + 318 152977936 - Asuc_0251 - periplasmic negative regulator of sigmaE 249 51.03 +1 284444..284878 + 144 152977937 - Asuc_0252 - positive regulator of sigma E, RseC/MucC 250 50.69 +1 284949..286331 - 460 152977938 - Asuc_0253 - argininosuccinate lyase 251 49.22 0 286414..287187 - 257 152977939 - Asuc_0254 - acetylglutamate kinase 252 48.96 0 287267..288277 - 336 152977940 - Asuc_0255 - N-acetyl-gamma-glutamyl-phosphate reductase 253 49.17 0 288380..289522 + 380 152977941 - Asuc_0256 - acetylornithine deacetylase 254 51.26 +1 289667..290581 - 304 152977942 - Asuc_0257 - N-acetylmuramic acid-6-phosphate etherase 255 50.18 +1 290583..291692 - 369 152977943 - Asuc_0258 - anhydro-N-acetylmuramic acid kinase 256 47.91 0 291748..293592 - 614 152977944 - Asuc_0259 - ABC transporter related 257 42.50 0 293721..294200 - 159 152977945 - Asuc_0260 - recombination regulator RecX 258 45.56 0 294358..295461 - 367 152977946 - Asuc_0261 - recombinase A 259 43.48 0 295673..296539 - 288 152977947 - Asuc_0262 - DNA adenine methylase 260 50.14 +1 296545..297633 - 362 152977948 - Asuc_0263 - 3-dehydroquinate synthase 261 45.08 0 297707..298234 - 175 152977949 - Asuc_0264 - shikimate kinase 262 48.43 0 298524..300530 - 668 152977950 - Asuc_0265 - transketolase 263 41.83 0 300974..301762 - 262 152977951 - Asuc_0267 - transcriptional regulator IclR 264 46.75 0 301939..302937 + 332 152977952 - Asuc_0268 - 2,3-diketo-L-gulonate reductase 265 43.88 0 303040..303513 + 157 152977953 - Asuc_0269 - hypothetical protein 266 43.06 0 303510..303992 + 160 152977954 - Asuc_0270 - tripartite ATP-independent periplasmic transporter DctQ 267 46.01 0 303989..305266 + 425 152977955 - Asuc_0271 - TRAP dicarboxylate transporter, DctM subunit 268 44.68 0 305339..306325 + 328 152977956 - Asuc_0272 - TRAP dicarboxylate transporter, DctP subunit 269 46.36 0 306385..307374 + 329 152977957 - Asuc_0273 - TRAP dicarboxylate transporter, DctP subunit 270 48.49 0 307447..308904 + 485 152977958 - Asuc_0274 - carbohydrate kinase FGGY 271 44.38 0 309022..310008 - 328 152977959 - Asuc_0275 - bile acid:sodium symporter 272 45.92 0 310362..311267 - 301 152977960 - Asuc_0276 - MscS mechanosensitive ion channel 273 45.29 0 311359..312303 - 314 152977961 - Asuc_0277 - lysophospholipase 274 46.99 0 312372..313484 - 370 152977962 - Asuc_0278 - aspartate-semialdehyde dehydrogenase 275 49.03 0 313706..314890 - 394 152977963 - Asuc_0279 - elongation factor Tu 276 41.56 0 314960..317062 - 700 152977964 - Asuc_0280 - elongation factor G 277 41.19 0 317161..317631 - 156 152977965 - Asuc_0281 - 30S ribosomal protein S7 278 41.49 0 317739..318167 - 142 152977966 - Asuc_0282 - 30S ribosomal protein S12 279 30.76 -2 318248..318907 - 219 152977967 - Asuc_0283 - regulator of competence-specific genes 280 45.42 0 324953..326458 - 501 152977968 - Asuc_0284 - sodium:neurotransmitter symporter 281 45.95 0 326675..327229 + 184 152977969 - Asuc_0285 - hypothetical protein 282 46.91 0 327457..328428 + 323 152977970 - Asuc_0286 - PTS system mannose/fructose/sorbose family IIA subunit 283 50.13 +1 328443..329240 + 265 152977971 - Asuc_0287 - PTS system mannose/fructose/sorbose family IIC subunit 45.47 MEAN 4.33 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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